; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002900 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002900
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPollen Ole e 1 allergen and extensin family protein
Genome locationscaffold359:549985..550705
RNA-Seq ExpressionMS002900
SyntenyMS002900
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583745.1 hypothetical protein SDJN03_19677, partial [Cucurbita argyrosperma subsp. sororia]7.7e-9080Show/hide
Query:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH
        M+TR C FH+S   FW   FFFFLL GHGFP+VVE AEG+TP+SDLL RDDWRQ+AGYGEERLSTVLVTGSVLCEACLHGDE Q+H+WPI GAMVGV+C 
Subjt:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH

Query:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCI
        N G+NSKS +W +GVTDEFGDF+IDIPSHLHATRSFEK CSIKIL+TPKN RCRPAH AG EQLQLSSFGGGIRTYTSG L+LQH+TSRPLQ CI
Subjt:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCI

XP_004139527.1 uncharacterized protein LOC101215830 [Cucumis sativus]4.4e-9377.67Show/hide
Query:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH
        M+ R   FH SV  FW   FFF+ L+GHGFP+V+ESAE +TPVSDLLSRD WR++AGYGEERLSTVLVTGSVLCEACLHGDEPQ+H+WPI GAMVGV+CH
Subjt:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH

Query:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSG
        N G+NSKSSDW HGVTDEFGDF+IDIPSHLHATRSFE VCSIKIL+TPKN  CRPAH AGR+ LQLSSFGGGIRTYTSG L+LQH+TSRPLQ C N+G G
Subjt:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSG

Query:  DKQTLW
         +QT W
Subjt:  DKQTLW

XP_008463598.1 PREDICTED: uncharacterized protein LOC103501709 [Cucumis melo]1.2e-9076.21Show/hide
Query:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH
        MM R   FH SV  FW   FFF+ L+GHGFP+V ESAE +TPVSDLL+RD WR++AGYGEERLSTVLVTGSVLCE+CLHGDEPQ+H+WPI GAMVGV+CH
Subjt:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH

Query:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSG
        N G+NSKSSDW HGVTDEFGDF+IDIPS LHAT+SFE VCSIKIL+TPKN  CRPAH AGR+QLQLSSFGGGIRTYTSG L+LQH+TSRPLQ C N+G  
Subjt:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSG

Query:  DKQTLW
         +QT W
Subjt:  DKQTLW

XP_022142515.1 uncharacterized protein LOC111012615 [Momordica charantia]1.8e-11899.52Show/hide
Query:  MMTRFCRFHDSVKPFWFS-FFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSC
        MMTRFCRFHDSVKPFWFS FFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSC
Subjt:  MMTRFCRFHDSVKPFWFS-FFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSC

Query:  HNNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGS
        HNNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGS
Subjt:  HNNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGS

Query:  GDKQTLW
        GDKQTLW
Subjt:  GDKQTLW

XP_038895694.1 uncharacterized protein LOC120083866 [Benincasa hispida]1.6e-9580Show/hide
Query:  MTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCHN
        M R    H SV  FW   FFFF L GHGFP+ VE+AE +TPVSDLLSRDDWRQ+AGYGEERLSTVLVTGSVLCEACLHGDEPQ+H+WPI GAMVGV+CHN
Subjt:  MTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCHN

Query:  NGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSGD
        NG+NSKSSDW HGVTDEFGDFIIDIPSHLHATRSFE VCSIKIL+TPKN  CRPAH AG +QLQLSSFGGGIRTYTSG L+LQH+TSRPLQ C N+G GD
Subjt:  NGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSGD

Query:  KQTLW
        +QT W
Subjt:  KQTLW

TrEMBL top hitse value%identityAlignment
A0A0A0LT20 Uncharacterized protein2.1e-9377.67Show/hide
Query:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH
        M+ R   FH SV  FW   FFF+ L+GHGFP+V+ESAE +TPVSDLLSRD WR++AGYGEERLSTVLVTGSVLCEACLHGDEPQ+H+WPI GAMVGV+CH
Subjt:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH

Query:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSG
        N G+NSKSSDW HGVTDEFGDF+IDIPSHLHATRSFE VCSIKIL+TPKN  CRPAH AGR+ LQLSSFGGGIRTYTSG L+LQH+TSRPLQ C N+G G
Subjt:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSG

Query:  DKQTLW
         +QT W
Subjt:  DKQTLW

A0A1S3CJM3 uncharacterized protein LOC1035017095.8e-9176.21Show/hide
Query:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH
        MM R   FH SV  FW   FFF+ L+GHGFP+V ESAE +TPVSDLL+RD WR++AGYGEERLSTVLVTGSVLCE+CLHGDEPQ+H+WPI GAMVGV+CH
Subjt:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH

Query:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSG
        N G+NSKSSDW HGVTDEFGDF+IDIPS LHAT+SFE VCSIKIL+TPKN  CRPAH AGR+QLQLSSFGGGIRTYTSG L+LQH+TSRPLQ C N+G  
Subjt:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSG

Query:  DKQTLW
         +QT W
Subjt:  DKQTLW

A0A5D3E5G2 Pollen_Ole_e_I domain-containing protein5.8e-9176.21Show/hide
Query:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH
        MM R   FH SV  FW   FFF+ L+GHGFP+V ESAE +TPVSDLL+RD WR++AGYGEERLSTVLVTGSVLCE+CLHGDEPQ+H+WPI GAMVGV+CH
Subjt:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH

Query:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSG
        N G+NSKSSDW HGVTDEFGDF+IDIPS LHAT+SFE VCSIKIL+TPKN  CRPAH AGR+QLQLSSFGGGIRTYTSG L+LQH+TSRPLQ C N+G  
Subjt:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSG

Query:  DKQTLW
         +QT W
Subjt:  DKQTLW

A0A6J1CL55 uncharacterized protein LOC1110126158.5e-11999.52Show/hide
Query:  MMTRFCRFHDSVKPFWFS-FFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSC
        MMTRFCRFHDSVKPFWFS FFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSC
Subjt:  MMTRFCRFHDSVKPFWFS-FFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSC

Query:  HNNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGS
        HNNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGS
Subjt:  HNNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGS

Query:  GDKQTLW
        GDKQTLW
Subjt:  GDKQTLW

A0A6J1KR10 uncharacterized protein LOC1114956891.1e-8980Show/hide
Query:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH
        M+TR C FH+SV  F   FFFFFLL GHGFP+VVESAEG+TP+SDLL RDDWRQ+AGYGEERLSTVLVTGSVLCEACLHGDE Q+H+WPI GAMVGV+C 
Subjt:  MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCH

Query:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCI
        N G+NSKS +W +GVTDEFGDF+IDIPSHLHA RSFEK CSIKIL+TPKN RCRPAH AG EQLQLSSFGGG RTYTSG L+LQH+TSRPLQ CI
Subjt:  NNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G40113.1 Pollen Ole e 1 allergen and extensin family protein8.7e-2338.96Show/hide
Query:  SDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCHNNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIK
        S L S  +   MAGYGE +LS+V++TGS+LC              P+SGA V + CH   +  + S W   VT++FG+F+I +PSHLHA    EK C +K
Subjt:  SDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCHNNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIK

Query:  ILQTPKN-ARCRPAHFAG--REQLQLSSFGGGIRTYTSGALKL----QHRTSRP
         +  PK+  RC          + ++L S   G R YTSG +KL      RTS+P
Subjt:  ILQTPKN-ARCRPAHFAG--REQLQLSSFGGGIRTYTSGALKL----QHRTSRP

AT4G17215.1 Pollen Ole e 1 allergen and extensin family protein2.2e-2641.21Show/hide
Query:  FLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCHNNGRNSKSSDWAHGVTDEFGDF
        FLL+     ++V   E     SD  SRD+  +MAGYGE++LS+VL+T S+L  +          S PI GA +G  CH   R  + S W   VT+E G F
Subjt:  FLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCHNNGRNSKSSDWAHGVTDEFGDF

Query:  IIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRT
        +ID+PSHLHA    +K C IK L  PK  RC      G   +QL S   G R YT+G + LQ  T
Subjt:  IIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRT

AT5G15780.1 Pollen Ole e 1 allergen and extensin family protein5.1e-0728.81Show/hide
Query:  STVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCHNNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQT--PKNARCRPAHFAGR
        S+ +V G+V C+ C +G   +  +  ISGA+V V C +   NSK S      TD+ G+F + +P  +       K CS+K+L +  P  +    A  +  
Subjt:  STVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCHNNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQT--PKNARCRPAHFAGR

Query:  EQLQLSSFGGGIRTYTSG
        ++L+ +  G   R +++G
Subjt:  EQLQLSSFGGGIRTYTSG

AT5G47635.1 Pollen Ole e 1 allergen and extensin family protein6.9e-2841.78Show/hide
Query:  SDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCHNNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIK
        ++L +R +  +MAGYGE++LS+V++TGS+LC+       P LHS PI GA V + CH   +  + S W   VTDE G+F ID+PS LHA    E  C IK
Subjt:  SDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCHNNGRNSKSSDWAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIK

Query:  ILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSR
         +  P+  RC        + ++L S   G R YTSG ++LQ  +SR
Subjt:  ILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACCAGATTTTGCAGATTCCATGACTCTGTCAAGCCATTTTGGTTTAGTTTCTTCTTCTTCTTCCTCCTGCTCGGCCATGGATTTCCAGTGGTAGTAGAATCTGC
AGAAGGTGATACCCCAGTATCCGACCTTTTGAGTCGAGATGATTGGAGGCAGATGGCTGGATATGGTGAGGAGAGACTGTCCACAGTTCTGGTCACAGGCTCTGTTCTTT
GTGAAGCTTGTTTGCATGGTGATGAACCTCAACTTCATTCATGGCCTATTTCAGGTGCCATGGTGGGTGTGAGCTGCCACAACAACGGAAGAAATAGCAAATCTTCTGAT
TGGGCACATGGAGTCACTGATGAATTTGGAGACTTCATTATTGATATTCCATCCCATCTTCATGCAACACGCAGCTTTGAAAAGGTTTGTTCAATCAAGATTCTTCAGAC
CCCGAAGAACGCACGCTGCCGACCTGCTCATTTCGCTGGTCGGGAGCAGCTGCAATTGTCATCGTTTGGAGGTGGCATCCGTACATATACTTCTGGCGCTCTCAAGCTGC
AGCACCGGACATCTCGACCCCTGCAAGGTTGTATAAACAAGGGAAGTGGTGACAAACAGACCTTATGG
mRNA sequenceShow/hide mRNA sequence
ATGATGACCAGATTTTGCAGATTCCATGACTCTGTCAAGCCATTTTGGTTTAGTTTCTTCTTCTTCTTCCTCCTGCTCGGCCATGGATTTCCAGTGGTAGTAGAATCTGC
AGAAGGTGATACCCCAGTATCCGACCTTTTGAGTCGAGATGATTGGAGGCAGATGGCTGGATATGGTGAGGAGAGACTGTCCACAGTTCTGGTCACAGGCTCTGTTCTTT
GTGAAGCTTGTTTGCATGGTGATGAACCTCAACTTCATTCATGGCCTATTTCAGGTGCCATGGTGGGTGTGAGCTGCCACAACAACGGAAGAAATAGCAAATCTTCTGAT
TGGGCACATGGAGTCACTGATGAATTTGGAGACTTCATTATTGATATTCCATCCCATCTTCATGCAACACGCAGCTTTGAAAAGGTTTGTTCAATCAAGATTCTTCAGAC
CCCGAAGAACGCACGCTGCCGACCTGCTCATTTCGCTGGTCGGGAGCAGCTGCAATTGTCATCGTTTGGAGGTGGCATCCGTACATATACTTCTGGCGCTCTCAAGCTGC
AGCACCGGACATCTCGACCCCTGCAAGGTTGTATAAACAAGGGAAGTGGTGACAAACAGACCTTATGG
Protein sequenceShow/hide protein sequence
MMTRFCRFHDSVKPFWFSFFFFFLLLGHGFPVVVESAEGDTPVSDLLSRDDWRQMAGYGEERLSTVLVTGSVLCEACLHGDEPQLHSWPISGAMVGVSCHNNGRNSKSSD
WAHGVTDEFGDFIIDIPSHLHATRSFEKVCSIKILQTPKNARCRPAHFAGREQLQLSSFGGGIRTYTSGALKLQHRTSRPLQGCINKGSGDKQTLW