; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002904 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002904
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFe_hyd_SSU domain-containing protein
Genome locationscaffold359:569185..569741
RNA-Seq ExpressionMS002904
SyntenyMS002904
Gene Ontology termsNA
InterPro domainsIPR004108 - Iron hydrogenase, large subunit, C-terminal
IPR009016 - Iron hydrogenase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637360.1 hypothetical protein CSA_011910 [Cucumis sativus]2.1e-5293.16Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
        L CSGCVTSAETVMLEKQSLDEF+SN+NK KVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKS+GVKAIFDTSCSRDLTLIEACNEFIARYR SQ +
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE

Query:  NEEKCKSSVPMISSACP
        NEEKCKSSVPMISSACP
Subjt:  NEEKCKSSVPMISSACP

XP_011654936.1 protein NAR1 isoform X1 [Cucumis sativus]2.1e-5293.16Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
        L CSGCVTSAETVMLEKQSLDEF+SN+NK KVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKS+GVKAIFDTSCSRDLTLIEACNEFIARYR SQ +
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE

Query:  NEEKCKSSVPMISSACP
        NEEKCKSSVPMISSACP
Subjt:  NEEKCKSSVPMISSACP

XP_022142658.1 protein NAR1 [Momordica charantia]2.7e-5598.29Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
        L CSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE

Query:  NEEKCKSSVPMISSACP
        NEEKCKSS+PMISSACP
Subjt:  NEEKCKSSVPMISSACP

XP_031745952.1 LOW QUALITY PROTEIN: protein NAR1-like [Cucumis sativus]2.1e-5293.16Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
        L CSGCVTSAETVMLEKQSLDEF+SN+NK KVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKS+GVKAIFDTSCSRDLTLIEACNEFIARYR SQ +
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE

Query:  NEEKCKSSVPMISSACP
        NEEKCKSSVPMISSACP
Subjt:  NEEKCKSSVPMISSACP

XP_038894944.1 protein NAR1 [Benincasa hispida]2.1e-5293.16Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
        L CSGCVTSAETVMLEKQSLDEF+SNINK KVVIVSLSPQSRASLAVHFG+SPLKVFKKLTTFFKS+GVKAIFDTSCSRDLTLIEACNEFIARYR+SQ +
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE

Query:  NEEKCKSSVPMISSACP
        NEEKCKSSVPMISSACP
Subjt:  NEEKCKSSVPMISSACP

TrEMBL top hitse value%identityAlignment
A0A0A0LVS1 Fe_hyd_SSU domain-containing protein1.0e-5293.16Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
        L CSGCVTSAETVMLEKQSLDEF+SN+NK KVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKS+GVKAIFDTSCSRDLTLIEACNEFIARYR SQ +
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE

Query:  NEEKCKSSVPMISSACP
        NEEKCKSSVPMISSACP
Subjt:  NEEKCKSSVPMISSACP

A0A5A7SYM1 Cytosolic Fe-S cluster assembly factor narfl4.0e-5293.16Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
        L CSGCVTSAETVMLEKQSLDEF+SNINK KVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKS+GVKAIFDTSCSRDLTLIEACNEFIARYR SQ +
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE

Query:  NEEKCKSSVPMISSACP
        NEEKC SSVPMISSACP
Subjt:  NEEKCKSSVPMISSACP

A0A6J1CNT4 protein NAR11.3e-5598.29Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
        L CSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE

Query:  NEEKCKSSVPMISSACP
        NEEKCKSS+PMISSACP
Subjt:  NEEKCKSSVPMISSACP

A0A6J1EHJ5 protein NAR1-like8.8e-5291.45Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
        L CSGCVTSAETVMLEKQSLDE +SNINK KVV+VSLSPQSRASLAVHFGISPLKVF+KLTTFFKS+GVKAIFDTSCSRDLTLIEACNEFIARYR+SQ E
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE

Query:  NEEKCKSSVPMISSACP
        NEEKCKSS+PMISSACP
Subjt:  NEEKCKSSVPMISSACP

A0A6J1KFK6 protein NAR1-like1.8e-5292.31Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
        L CSGCVTSAETVMLEKQSLDEF+SNINK KVV+VSLSPQSRASLAVHFGISPLKVF+KLTTFFKS+GVKAIFDTSCSRDLTLIEACNEFIARYR+SQ E
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE

Query:  NEEKCKSSVPMISSACP
        NEEKCKSS+PMISSACP
Subjt:  NEEKCKSSVPMISSACP

SwissProt top hitse value%identityAlignment
Q54F30 Probable cytosolic Fe-S cluster assembly factor narfl3.6e-2648.12Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNIN----------KRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEF
        L CSGC+TSAE+V++  QS+ EF+ N+N          ++K ++++LSPQSRASLA HF IS L V KKL TFFK + +  +FD+S SRD +L+E+  EF
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNIN----------KRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEF

Query:  IARYRQSQSEN---EEKCKSS---VPMISSACP
        +ARY+++   N   EE  K     +PM+SSACP
Subjt:  IARYRQSQSEN---EEKCKSS---VPMISSACP

Q5RF36 Cytosolic iron-sulfur assembly component 36.3e-2345.6Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEF--ISNINK------RKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIA
        L CSGC+TSAETV++ +QS +E   + + NK      +++V+VS+SPQSRASLA  F ++P    +KLT+FFK IGV  +FDT+ SR  +L+E+  EF+ 
Subjt:  LPCSGCVTSAETVMLEKQSLDEF--ISNINK------RKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIA

Query:  RYRQSQSENEEKCKSSVPMISSACP
        R+R      +  CK ++P+++SACP
Subjt:  RYRQSQSENEEKCKSSVPMISSACP

Q7TMW6 Cytosolic iron-sulfur assembly component 34.1e-2244.8Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEF--ISNINK------RKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIA
        L CSGCVTSAETV++ +QS +E   + + NK      +++V+VS+SPQSRASLA  F + P    +KLT+FFK IGV  +FDT+ +R+ +L+E+  EF+ 
Subjt:  LPCSGCVTSAETVMLEKQSLDEF--ISNINK------RKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIA

Query:  RYRQSQSENEEKCKSSVPMISSACP
        R+R+  +  E     ++P+++SACP
Subjt:  RYRQSQSENEEKCKSSVPMISSACP

Q94CL6 Protein NAR13.2e-4371.79Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
        L CSGC+TSAETVMLEKQSLDEF+S ++K K V+VS+SPQSRASLAVH+ ISPL+VFKKLTTF KS+GVKA+FDTSCSRDL LIE+CNEF++RY+Q+ S+
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE

Query:  NEEKCKSSVPMISSACP
        + E  +S +P++SSACP
Subjt:  NEEKCKSSVPMISSACP

Q9H6Q4 Cytosolic iron-sulfur assembly component 31.4e-2244.8Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEF--ISNINK------RKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIA
        L CSGC+TSAETV++ +QS +E   + + NK      +++V+VS+SPQSRASLA  F ++P    +KLT+FFK IGV  +FDT+ SR  +L+E+  EF+ 
Subjt:  LPCSGCVTSAETVMLEKQSLDEF--ISNINK------RKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIA

Query:  RYRQSQSENEEKCKSSVPMISSACP
        R+R      +  C+ ++P+++SACP
Subjt:  RYRQSQSENEEKCKSSVPMISSACP

Arabidopsis top hitse value%identityAlignment
AT4G16440.1 ferredoxin hydrogenases2.3e-4471.79Show/hide
Query:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE
        L CSGC+TSAETVMLEKQSLDEF+S ++K K V+VS+SPQSRASLAVH+ ISPL+VFKKLTTF KS+GVKA+FDTSCSRDL LIE+CNEF++RY+Q+ S+
Subjt:  LPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSE

Query:  NEEKCKSSVPMISSACP
        + E  +S +P++SSACP
Subjt:  NEEKCKSSVPMISSACP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTTTGCCTTGTAGTGGTTGTGTAACATCAGCAGAGACTGTCATGCTGGAGAAGCAAAGTCTGGATGAATTTATTTCAAACATTAATAAAAGAAAGGTTGTAATTGTCTC
ATTATCTCCCCAATCCAGAGCCTCACTTGCTGTCCATTTTGGCATCTCCCCGCTGAAGGTTTTTAAGAAACTCACGACATTTTTTAAGTCCATTGGAGTAAAAGCTATAT
TTGATACAAGTTGCAGTAGAGATTTAACCTTAATTGAAGCTTGTAATGAGTTCATAGCAAGGTATAGACAAAGCCAGTCAGAAAATGAAGAAAAATGCAAATCATCCGTT
CCTATGATCTCATCAGCTTGCCCA
mRNA sequenceShow/hide mRNA sequence
CTTTTGCCTTGTAGTGGTTGTGTAACATCAGCAGAGACTGTCATGCTGGAGAAGCAAAGTCTGGATGAATTTATTTCAAACATTAATAAAAGAAAGGTTGTAATTGTCTC
ATTATCTCCCCAATCCAGAGCCTCACTTGCTGTCCATTTTGGCATCTCCCCGCTGAAGGTTTTTAAGAAACTCACGACATTTTTTAAGTCCATTGGAGTAAAAGCTATAT
TTGATACAAGTTGCAGTAGAGATTTAACCTTAATTGAAGCTTGTAATGAGTTCATAGCAAGGTATAGACAAAGCCAGTCAGAAAATGAAGAAAAATGCAAATCATCCGTT
CCTATGATCTCATCAGCTTGCCCA
Protein sequenceShow/hide protein sequence
LLPCSGCVTSAETVMLEKQSLDEFISNINKRKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFFKSIGVKAIFDTSCSRDLTLIEACNEFIARYRQSQSENEEKCKSSV
PMISSACP