; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002905 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002905
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytosolic Fe-S cluster assembly factor NAR1
Genome locationscaffold359:570175..570566
RNA-Seq ExpressionMS002905
SyntenyMS002905
Gene Ontology termsGO:0005829 - cytosol (cellular component)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035683.1 cytosolic Fe-S cluster assembly factor narfl [Cucumis melo var. makuwa]2.7e-2598.46Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASR QLKAEPVKISLKDCLAC
Subjt:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

KAG7012644.1 Protein NAR1 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-2595.38Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        MSEKFSATLRIGDLNDFIAPSQAC+VSLKGLKATTTKPD+VEVSAS+KQLKAEPVKISLKDCLAC
Subjt:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

TYK30861.1 cytosolic Fe-S cluster assembly factor narfl [Cucumis melo var. makuwa]2.7e-2598.46Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASR QLKAEPVKISLKDCLAC
Subjt:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

XP_022142658.1 protein NAR1 [Momordica charantia]5.5e-26100Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
Subjt:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

XP_038894944.1 protein NAR1 [Benincasa hispida]2.7e-2598.46Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASR QLKAEPVKISLKDCLAC
Subjt:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

TrEMBL top hitse value%identityAlignment
A0A5A7SYM1 Cytosolic Fe-S cluster assembly factor narfl1.3e-2598.46Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASR QLKAEPVKISLKDCLAC
Subjt:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

A0A5D3E5I9 Cytosolic Fe-S cluster assembly factor narfl1.3e-2598.46Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASR QLKAEPVKISLKDCLAC
Subjt:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

A0A6J1CNT4 protein NAR12.7e-26100Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
Subjt:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

A0A6J1EEW4 LOW QUALITY PROTEIN: protein NAR1-like1.7e-2595.38Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        MSEKFSATLRIGDLNDFIAPSQAC+VSLKGLKATTTKPD+VEVSAS+KQLKAEPVKISLKDCLAC
Subjt:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

A0A6J1KFK6 protein NAR1-like1.7e-2596.92Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        MSEKFSATLRIGDLND+IAPSQACIVSLKGLKAT+TKPDKVEVSASRKQLKAEPVKISLKDCLAC
Subjt:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

SwissProt top hitse value%identityAlignment
B4GXC8 Probable cytosolic Fe-S cluster assembly factor GL211353.3e-0543.66Show/hide
Query:  KFSATLRIGDLNDFIAPSQACI---------VSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        +FS  L++ DL+DFI PSQ CI          S  G K T  +    E S S KQ K + V+I+L+DCLAC
Subjt:  KFSATLRIGDLNDFIAPSQACI---------VSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

B4JBE6 Probable cytosolic Fe-S cluster assembly factor GH107607.3e-0544.29Show/hide
Query:  KFSATLRIGDLNDFIAPSQACI--------VSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        +FS  L++ DL+DFI PSQ CI         S  G K T       E S S KQ K + V+I+L+DCLAC
Subjt:  KFSATLRIGDLNDFIAPSQACI--------VSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

B4LQR5 Probable cytosolic Fe-S cluster assembly factor GJ130477.3e-0544.29Show/hide
Query:  KFSATLRIGDLNDFIAPSQACI--------VSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        +FS  L++ DL+DFI PSQ CI         S  G K T       E S S KQ K + V+I+L+DCLAC
Subjt:  KFSATLRIGDLNDFIAPSQACI--------VSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

B5DK31 Probable cytosolic Fe-S cluster assembly factor GA290803.3e-0543.66Show/hide
Query:  KFSATLRIGDLNDFIAPSQACI---------VSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        +FS  L++ DL+DFI PSQ CI          S  G K T  +    E S S KQ K + V+I+L+DCLAC
Subjt:  KFSATLRIGDLNDFIAPSQACI---------VSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

Q94CL6 Protein NAR14.1e-1667.69Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        MSEKFS TLR+GDLNDFIAPSQAC++SLK  K    K D+ +V  + KQ + EPVKISLKDCLAC
Subjt:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC

Arabidopsis top hitse value%identityAlignment
AT4G16440.1 ferredoxin hydrogenases2.9e-1767.69Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC
        MSEKFS TLR+GDLNDFIAPSQAC++SLK  K    K D+ +V  + KQ + EPVKISLKDCLAC
Subjt:  MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAGAAGTTCTCGGCAACTTTGAGGATAGGGGATCTGAATGATTTCATAGCGCCTTCCCAGGCTTGTATAGTTTCTCTCAAAGGGCTGAAAGCTACAACCACGAA
GCCGGATAAAGTTGAGGTTTCGGCTTCTAGGAAGCAATTGAAAGCAGAACCAGTTAAGATTTCACTGAAGGATTGCTTAGCATGC
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAGAAGTTCTCGGCAACTTTGAGGATAGGGGATCTGAATGATTTCATAGCGCCTTCCCAGGCTTGTATAGTTTCTCTCAAAGGGCTGAAAGCTACAACCACGAA
GCCGGATAAAGTTGAGGTTTCGGCTTCTAGGAAGCAATTGAAAGCAGAACCAGTTAAGATTTCACTGAAGGATTGCTTAGCATGC
Protein sequenceShow/hide protein sequence
MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATTTKPDKVEVSASRKQLKAEPVKISLKDCLAC