; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002907 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002907
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionX8 domain-containing protein
Genome locationscaffold359:582897..583166
RNA-Seq ExpressionMS002907
SyntenyMS002907
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637357.1 hypothetical protein CSA_011907 [Cucumis sativus]2.1e-3994.94Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIADEQVPDDELQRALDWACGKGGADCR IQ+KQPCFYPNTVRDHASYAFN+YYQKFKHKGATCYFNSAAMVT+LDPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

XP_008463607.1 PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis melo]2.3e-3892.41Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIADEQVPDDELQRALDWACGKGGADC  IQ+KQPCFYPNT+RDHASYAFN+YYQKFKHKGATCYFNSAAMVT+LDPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

XP_011654946.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Cucumis sativus]2.1e-3994.94Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIADEQVPDDELQRALDWACGKGGADCR IQ+KQPCFYPNTVRDHASYAFN+YYQKFKHKGATCYFNSAAMVT+LDPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

XP_022142612.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Momordica charantia]3.8e-41100Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

XP_038895406.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Benincasa hispida]9.3e-4096.2Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIADEQVPDDELQRALDWACGKGGADCR IQ+KQPCFYPNTVRDHASYAFN+YYQKFKHKGATCYFNSAAMVTALDPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

TrEMBL top hitse value%identityAlignment
A0A0A0LW57 X8 domain-containing protein1.0e-3994.94Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIADEQVPDDELQRALDWACGKGGADCR IQ+KQPCFYPNTVRDHASYAFN+YYQKFKHKGATCYFNSAAMVT+LDPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

A0A1S3CJN7 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like1.1e-3892.41Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIADEQVPDDELQRALDWACGKGGADC  IQ+KQPCFYPNT+RDHASYAFN+YYQKFKHKGATCYFNSAAMVT+LDPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

A0A6J1CNC5 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like1.8e-41100Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

A0A6J1EBZ4 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like4.2e-3892.41Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIADEQVPDDELQRALDWACGKGGADC  IQVK+PCFYPNTVRDHASYAFN+YYQKFKHKGA+C+FNSAAMVTALDPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

A0A6J1HUR1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like6.1e-3789.87Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIADEQVPDDELQRALDWACGKGGA+C  IQVK+PCFYP+TVRDHASYAFN+YYQKFKHKGA+C+FNSAAMVTALDPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

SwissProt top hitse value%identityAlignment
O65399 Glucan endo-1,3-beta-glucosidase 13.0e-1749.37Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        +CIA + V    LQ ALDWACG G ++C +IQ  + C+ PN V+ HAS+AFN+YYQK      +C F   AM+T  DPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

Q8VYE5 Glucan endo-1,3-beta-glucosidase 125.0e-2055.7Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIA  Q    ELQ ALDWACG G  DC  +Q  QPCF P+TV  HASYAFNTYYQ+       C FN A++    DPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

Q94CD8 Glucan endo-1,3-beta-glucosidase 41.9e-1951.9Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        +C+A     DD+L   L+WACG+G A+C  IQ  QPC+ PN V+ HAS+AFN YYQK K  G TC F+  A+ T  DPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

Q9FJU9 Glucan endo-1,3-beta-glucosidase 131.2e-1645.57Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIA  +  + +L+ ALDWACG G  DC  IQ  QPCF P+T+  HAS+ FN+Y+Q+ +     C F  A +    DPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

Q9M2K6 PLASMODESMATA CALLOSE-BINDING PROTEIN 54.4e-1646.25Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPSK
        WC+A     D  LQ A++WACG+GGADC  IQ   PC  P  V+  AS+ FN YY K   +   C FN+ A +T+L+PS+
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPSK

Arabidopsis top hitse value%identityAlignment
AT2G04910.1 Carbohydrate-binding X8 domain superfamily protein2.3e-2860.98Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPSKYL
        WC+AD Q+PD+ +Q A+DWAC  GGADC  IQ  QPCF PNTV+DHAS  FN YYQ++K  G +C FNS A +T  DPSK L
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPSKYL

AT2G04910.2 Carbohydrate-binding X8 domain superfamily protein1.9e-2760.76Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WC+AD Q+PD+ +Q A+DWAC  GGADC  IQ  QPCF PNTV+DHAS  FN YYQ++K  G +C FNS A +T  DPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

AT4G29360.1 O-Glycosyl hydrolases family 17 protein3.6e-2155.7Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIA  Q    ELQ ALDWACG G  DC  +Q  QPCF P+TV  HASYAFNTYYQ+       C FN A++    DPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS

AT4G29360.2 O-Glycosyl hydrolases family 17 protein1.7e-2357.14Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPSKYLIT
        WCIA  Q    ELQ ALDWACG G  DC  +Q  QPCF P+TV  HASYAFNTYYQ+       C FN A++    DPSKYL T
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPSKYLIT

AT5G35740.1 Carbohydrate-binding X8 domain superfamily protein8.1e-3475Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVK-QPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS
        WCIADEQ PDDELQ ALDWACGKGGADC K+Q + QPCF PNT+RDHAS+AFN+YYQ +K+KG +CYF  AAM+T LDPS
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCRKIQVK-QPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGTGCATAGCGGATGAACAAGTACCCGATGATGAGCTACAAAGAGCACTTGATTGGGCTTGTGGGAAAGGAGGGGCAGATTGCAGAAAGATTCAAGTGAAACAGCCTTG
TTTTTACCCCAACACTGTGAGGGACCATGCTTCCTATGCCTTCAACACTTACTACCAAAAGTTCAAGCACAAGGGAGCCACTTGCTACTTCAACTCAGCTGCCATGGTCA
CTGCCCTTGATCCTAGTAAGTACTTAATTACTCGTCACCCACCCGACATC
mRNA sequenceShow/hide mRNA sequence
TGGTGCATAGCGGATGAACAAGTACCCGATGATGAGCTACAAAGAGCACTTGATTGGGCTTGTGGGAAAGGAGGGGCAGATTGCAGAAAGATTCAAGTGAAACAGCCTTG
TTTTTACCCCAACACTGTGAGGGACCATGCTTCCTATGCCTTCAACACTTACTACCAAAAGTTCAAGCACAAGGGAGCCACTTGCTACTTCAACTCAGCTGCCATGGTCA
CTGCCCTTGATCCTAGTAAGTACTTAATTACTCGTCACCCACCCGACATC
Protein sequenceShow/hide protein sequence
WCIADEQVPDDELQRALDWACGKGGADCRKIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPSKYLITRHPPDI