CuGenDBv2

Gene ID	MS002935
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP synthase subunit alpha, chloroplastic
Genome location	scaffold595_1:138320..138591
RNA-Seq Expression	MS002935
Synteny	MS002935
Gene Ontology terms	GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function) GO:0043531 - ADP binding (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily IPR023366 - ATP synthase subunit alpha, N-terminal domain-like superfamily IPR004100 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

Homology

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GenBank top hits

e value

%identity

Alignment

PHT45329.1 ATP synthase subunit alpha, chloroplastic [Capsicum baccatum]

1.4e-22

75.28

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Query:  TILRDYTSKMRCQHFLQLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        TI  D  S + C+    + Q+NREVKIVNTGTVLQVGD IARI+GLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGLLIQERSS
Subjt:  TILRDYTSKMRCQHFLQLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

QNQ14348.1 ATP synthase CF1 alpha subunit [Dianthoveus cremnophilus]

2.3e-22

84.93

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREVKIVNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQERSS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

YP_009318069.1 ATP synthase CF1 alpha subunit [Corylus fargesii]

3.0e-22

83.56

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREVK+VNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQERSS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

YP_009461106.1 ATP synthase CF1 alpha subunit [Lamium galeobdolon]

5.1e-22

72.53

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Query:  LSTILRDYTSKMRCQHFLQLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        +STILR+           ++ Q+NREVKIVNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQE SS
Subjt:  LSTILRDYTSKMRCQHFLQLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

YP_009509914.1 ATP synthase CF1 alpha subunit [Corylus ferox var. thibetica]

3.0e-22

83.56

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREVK+VNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQERSS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

TrEMBL top hits

e value

%identity

Alignment

A0A1I9RG22 ATP synthase subunit alpha, chloroplastic

1.5e-22

83.56

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREVK+VNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQERSS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

A0A2G2WJI2 ATP synthase subunit alpha, mitochondrial

6.5e-23

75.28

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Query:  TILRDYTSKMRCQHFLQLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        TI  D  S + C+    + Q+NREVKIVNTGTVLQVGD IARI+GLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGLLIQERSS
Subjt:  TILRDYTSKMRCQHFLQLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

A0A345BAT7 ATP synthase subunit alpha, chloroplastic

1.5e-22

83.56

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREVK+VNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQERSS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

A0A385KBW2 ATP synthase subunit alpha, chloroplastic

1.5e-22

83.56

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREVK+VNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQERSS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

A0A7H0LXA4 ATP synthase subunit alpha

1.1e-22

84.93

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREVKIVNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQERSS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

SwissProt top hits

e value

%identity

Alignment

A4QJA0 ATP synthase subunit alpha, chloroplastic

2.0e-24

83.56

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREVKIVNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQE SS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

A4QJI4 ATP synthase subunit alpha, chloroplastic

2.0e-24

83.56

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREVKIVNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQE SS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

B1NWD5 ATP synthase subunit alpha, chloroplastic

2.0e-24

83.56

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREVKIVNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQE SS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

Q14FH2 ATP synthase subunit alpha, chloroplastic

2.0e-24

83.56

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREVKIVNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQE SS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

Q49L13 ATP synthase subunit alpha, chloroplastic

2.0e-24

83.56

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREVKIVNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQE SS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

1.9e-06

46.43

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Query:  GTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQE
        G V+ VGD IA++YGL+E+   E+V F  G   +ALNLE+ NVG+V+      I+E
Subjt:  GTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQE

ATCG00120.1 ATP synthase subunit alpha

6.9e-25

82.19

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Query:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS
        ++ Q+NREV IVNTGTVLQVGD IARIYGLDEVM  ELV FEEGTI IALNLESNNVGVVLM DGL+IQE SS
Subjt:  QLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

ATMG01190.1 ATP synthase subunit 1

1.9e-06

46.43

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Query:  GTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQE
        G V+ VGD IA++YGL+E+   E+V F  G   +ALNLE+ NVG+V+      I+E
Subjt:  GTVLQVGDEIARIYGLDEVM-HELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQE

Sequences

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CDS sequence

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CTTTCTACCATTTTGAGGGATTATACAAGTAAAATGAGATGTCAACACTTCCTACAACTACCGCAACATAATAGAGAAGTAAAAATTGTAAATACCGGTACCGTACTTCA
AGTAGGTGACGAGATTGCTCGTATTTATGGTCTTGATGAAGTAATGCATGAATTAGTAAACTTTGAAGAGGGTACTATAGACATAGCTCTAAATTTAGAATCAAATAATG
TTGGTGTTGTATTGATGGATGATGGTTTGCTGATACAGGAGAGAAGTTCT

mRNA sequence

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Protein sequence

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LSTILRDYTSKMRCQHFLQLPQHNREVKIVNTGTVLQVGDEIARIYGLDEVMHELVNFEEGTIDIALNLESNNVGVVLMDDGLLIQERSS

MS002935 (gene) of Bitter gourd (TR) v1 genome