; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002937 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002937
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAgglutinin domain-containing protein
Genome locationscaffold595_1:162978..171817
RNA-Seq ExpressionMS002937
SyntenyMS002937
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155409.1 uncharacterized protein LOC111022557 [Momordica charantia]6.1e-6564.14Show/hide
Query:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRN--LKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ
        DD N+LF+PVK+ +NIVALR++GN+ FC SL+IDGK N LNA   N  ++  ME +E V+SS+IENIEYRMKDAKIYGERVWSM KGDA NKT A DTVQ
Subjt:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRN--LKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ

Query:  FTFTFENKRKSSWTNTLGAR------FSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL
        FTF+FE+K K +WTN LG +      F+AG+P IG+G+I+VS  AG EY+ GET K K  +SC++T+T+PPMSK+KMNA+VK GFC+VPFSYT+IDTL
Subjt:  FTFTFENKRKSSWTNTLGAR------FSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL

XP_022155413.1 uncharacterized protein LOC111022561 [Momordica charantia]4.2e-5052.53Show/hide
Query:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNL--KVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ
        +DPNTLF PVKV+ ++VALRN+GN +FC  LTI+GK + LNA+  +L  +  M V E+VVS  I+N+EYR+ DA+IYG+++ SMAKGDA N T   D V 
Subjt:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNL--KVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ

Query:  FTFTFENKRKSSWTNTLG------ARFSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL
        F F++ENK K++WT+TL        +F AG+P +G G I VS E G+ Y  GETHKHK  +     VT+PP+S++K+NAVVK G C VPFSY + D L
Subjt:  FTFTFENKRKSSWTNTLG------ARFSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL

XP_022157630.1 uncharacterized protein LOC111024291 [Momordica charantia]3.0e-6469.39Show/hide
Query:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNLKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQFT
        DDPNTLFK VKVDHNIVAL                              HMEV + VVS KIENIEY + DAKIYGERVWSMAKGDATNKTNA D VQFT
Subjt:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNLKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQFT

Query:  FTFENKRKSSWTNTLGAR------FSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL
        FTFE+KRK+SWTNTLGAR      FS GIPTIGNGNISVSFE GA YS GETHK K+L+SCT+TVTIPPMSK+KMN VVK GFCDVPF YTQIDTL
Subjt:  FTFENKRKSSWTNTLGAR------FSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL

XP_038906851.1 uncharacterized protein LOC120092742 [Benincasa hispida]3.0e-6461.11Show/hide
Query:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNA--ANRNLKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ
        +DPNT F+PVK+  NIVALRN+GN+ FC SL++D K + LNA  +N   +  MEVSE V+SSKIENIEYR++DAKIYGERVWSMAKGDA NKT A DT+Q
Subjt:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNA--ANRNLKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ

Query:  FTFTFENKRKSSWTNTLGAR------FSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL
        FTF+FE+KRK +WTNT+  +      F+AG+P IG+  + + FE G  YS GETHK K+L++C++T+T+PPMSK+K++ VVK GFC+VP+SYTQ DTL
Subjt:  FTFTFENKRKSSWTNTLGAR------FSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL

XP_038906982.1 uncharacterized protein LOC120092830 [Benincasa hispida]8.8e-6460.61Show/hide
Query:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNA--ANRNLKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ
        +DPNT F+PVK+  NIVALRN+GN+ FC SL++D K + LNA  +N   +  MEVSE V+SSKIENIEYR++DAKIYGERVWSMAKGDA NKT A DT+Q
Subjt:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNA--ANRNLKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ

Query:  FTFTFENKRKSSWTNTLGAR------FSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL
        FTF+FE+KRK +WTNT+  +      F+AG+P IG+  + + FE G  YS GETHK K+L++C++T+T+PPMSK+K++ VVK GFC+VP+SYT+ DTL
Subjt:  FTFTFENKRKSSWTNTLGAR------FSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL

TrEMBL top hitse value%identityAlignment
A0A6J1DMW2 uncharacterized protein LOC1110225612.0e-5052.53Show/hide
Query:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNL--KVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ
        +DPNTLF PVKV+ ++VALRN+GN +FC  LTI+GK + LNA+  +L  +  M V E+VVS  I+N+EYR+ DA+IYG+++ SMAKGDA N T   D V 
Subjt:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNL--KVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ

Query:  FTFTFENKRKSSWTNTLG------ARFSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL
        F F++ENK K++WT+TL        +F AG+P +G G I VS E G+ Y  GETHKHK  +     VT+PP+S++K+NAVVK G C VPFSY + D L
Subjt:  FTFTFENKRKSSWTNTLG------ARFSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL

A0A6J1DPD4 uncharacterized protein LOC1110225916.4e-4448.22Show/hide
Query:  DPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNL--KVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQF
        DPNTLF PVKVD++IVALR+ GN+ FC SLT DGK + LNAA+  +     +EV EVVV+  IEN+EYR++DA++YG+++ +++KG A NKT   D V  
Subjt:  DPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNL--KVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQF

Query:  TFTFENKRKSSWTNT------LGARFSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL
         F +E K +  W+++      + A+F+  IPT+G+    +SFE  +E +R E+ K K     + T+TI PMSK+K  AVV  G+CD+PFSYTQ DTL
Subjt:  TFTFENKRKSSWTNT------LGARFSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL

A0A6J1DQ71 uncharacterized protein LOC1110225572.9e-6564.14Show/hide
Query:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRN--LKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ
        DD N+LF+PVK+ +NIVALR++GN+ FC SL+IDGK N LNA   N  ++  ME +E V+SS+IENIEYRMKDAKIYGERVWSM KGDA NKT A DTVQ
Subjt:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRN--LKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ

Query:  FTFTFENKRKSSWTNTLGAR------FSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL
        FTF+FE+K K +WTN LG +      F+AG+P IG+G+I+VS  AG EY+ GET K K  +SC++T+T+PPMSK+KMNA+VK GFC+VPFSYT+IDTL
Subjt:  FTFTFENKRKSSWTNTLGAR------FSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL

A0A6J1DTM1 uncharacterized protein LOC1110242911.5e-6469.39Show/hide
Query:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNLKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQFT
        DDPNTLFK VKVDHNIVAL                              HMEV + VVS KIENIEY + DAKIYGERVWSMAKGDATNKTNA D VQFT
Subjt:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNLKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQFT

Query:  FTFENKRKSSWTNTLGAR------FSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL
        FTFE+KRK+SWTNTLGAR      FS GIPTIGNGNISVSFE GA YS GETHK K+L+SCT+TVTIPPMSK+KMN VVK GFCDVPF YTQIDTL
Subjt:  FTFENKRKSSWTNTLGAR------FSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL

A0A6J1DUY9 uncharacterized protein LOC1110242822.3e-4647Show/hide
Query:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNL--KVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ
        ++PN LF P K+D   +ALRN+GN+ FC+ L+++GK + LN+A   +  +  ++ +E V+S  I+N+EYR+ DA+IYG++V SMAKGDA NKT   DTV 
Subjt:  DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNL--KVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQ

Query:  FTFTFENKRKSSWTN--------TLGARFSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL
        F FT+E K+K +W++        ++ ++F  GIP +G G I V  E GAEY  G THK K +   T  VT+PPMS++K+NAV+K G C VPFSY + D L
Subjt:  FTFTFENKRKSSWTN--------TLGARFSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACGATCCCAACACATTGTTTAAGCCGGTGAAAGTTGACCACAACATTGTGGCTCTTCGTAACATGGGGAACAGCCAATTCTGCATATCACTCACCATCGATGGAAAGAA
AAATTATTTGAATGCTGCAAATCGAAATCTTAAAGTCCACATGGAAGTCTCAGAAGTTGTAGTATCCAGCAAAATAGAAAACATTGAGTATCGCATGAAGGATGCAAAAA
TCTATGGCGAGAGAGTTTGGTCAATGGCCAAAGGAGATGCCACAAACAAAACCAATGCAGTCGACACTGTCCAATTCACATTCACTTTTGAGAACAAAAGGAAAAGCAGT
TGGACCAACACATTGGGCGCCAGATTCTCTGCCGGGATTCCAACCATTGGAAATGGAAACATTAGTGTTTCCTTTGAGGCTGGTGCAGAATATTCCAGGGGAGAAACACA
CAAACATAAATTGTTGGTGTCTTGTACCAACACTGTGACGATACCTCCAATGTCGAAACTGAAGATGAATGCGGTCGTAAAATGGGGCTTTTGCGACGTCCCGTTTTCGT
ATACTCAGATTGACACGCTC
mRNA sequenceShow/hide mRNA sequence
GACGATCCCAACACATTGTTTAAGCCGGTGAAAGTTGACCACAACATTGTGGCTCTTCGTAACATGGGGAACAGCCAATTCTGCATATCACTCACCATCGATGGAAAGAA
AAATTATTTGAATGCTGCAAATCGAAATCTTAAAGTCCACATGGAAGTCTCAGAAGTTGTAGTATCCAGCAAAATAGAAAACATTGAGTATCGCATGAAGGATGCAAAAA
TCTATGGCGAGAGAGTTTGGTCAATGGCCAAAGGAGATGCCACAAACAAAACCAATGCAGTCGACACTGTCCAATTCACATTCACTTTTGAGAACAAAAGGAAAAGCAGT
TGGACCAACACATTGGGCGCCAGATTCTCTGCCGGGATTCCAACCATTGGAAATGGAAACATTAGTGTTTCCTTTGAGGCTGGTGCAGAATATTCCAGGGGAGAAACACA
CAAACATAAATTGTTGGTGTCTTGTACCAACACTGTGACGATACCTCCAATGTCGAAACTGAAGATGAATGCGGTCGTAAAATGGGGCTTTTGCGACGTCCCGTTTTCGT
ATACTCAGATTGACACGCTC
Protein sequenceShow/hide protein sequence
DDPNTLFKPVKVDHNIVALRNMGNSQFCISLTIDGKKNYLNAANRNLKVHMEVSEVVVSSKIENIEYRMKDAKIYGERVWSMAKGDATNKTNAVDTVQFTFTFENKRKSS
WTNTLGARFSAGIPTIGNGNISVSFEAGAEYSRGETHKHKLLVSCTNTVTIPPMSKLKMNAVVKWGFCDVPFSYTQIDTL