; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002944 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002944
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Genome locationscaffold595_1:230786..232994
RNA-Seq ExpressionMS002944
SyntenyMS002944
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6668445.1 hypothetical protein CIPAW_01G170800 [Carya illinoinensis]2.0e-1860.47Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNV
        +TDTASVLLEAMEYIQFLHEQ+K+ S   + +T SV   QE+ P+SL S GLCLVP++ T+ +A  NGADIWAP+KT+S   EK +
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNV

XP_022155423.1 transcription factor bHLH153-like isoform X1 [Momordica charantia]6.7e-3083.52Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIK-LASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ
        +TDTASVLLEAMEYIQFLHEQIK L +P   L    +   QEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ
Subjt:  QTDTASVLLEAMEYIQFLHEQIK-LASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ

XP_022155424.1 transcription factor bHLH154-like isoform X2 [Momordica charantia]6.7e-3083.52Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIK-LASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ
        +TDTASVLLEAMEYIQFLHEQIK L +P   L    +   QEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ
Subjt:  QTDTASVLLEAMEYIQFLHEQIK-LASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ

XP_042941108.1 transcription factor bHLH153 isoform X1 [Carya illinoinensis]2.0e-1860.47Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNV
        +TDTASVLLEAMEYIQFLHEQ+K+ S   + +T SV   QE+ P+SL S GLCLVP++ T+ +A  NGADIWAP+KT+S   EK +
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNV

XP_042941122.1 transcription factor bHLH153 isoform X3 [Carya illinoinensis]2.0e-1860.47Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNV
        +TDTASVLLEAMEYIQFLHEQ+K+ S   + +T SV   QE+ P+SL S GLCLVP++ T+ +A  NGADIWAP+KT+S   EK +
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNV

TrEMBL top hitse value%identityAlignment
A0A2I4H839 transcription factor bHLH153-like isoform X11.3e-1861.9Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEK
        +TDTASVLLEAMEYIQFLHEQ+K+ S   + +T SV   QE+ P+SL S GLCLVP++ T+ +A  NGADIWAP+KT+S   EK
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEK

A0A2I4H844 transcription factor bHLH153-like isoform X21.3e-1861.9Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEK
        +TDTASVLLEAMEYIQFLHEQ+K+ S   + +T SV   QE+ P+SL S GLCLVP++ T+ +A  NGADIWAP+KT+S   EK
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEK

A0A5D3CZQ3 Transcription factor bHLH113-like isoform X24.9e-1862.5Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEP--WSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNV
        +TDTASVLLEAMEYIQFLHEQ+K+ S   + +T +V L QE+EP   SL S GLCLVPI+ T+ +A  NGADIWAPVKT S   EK++
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEP--WSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNV

A0A6J1DMX2 transcription factor bHLH153-like isoform X13.2e-3083.52Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIK-LASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ
        +TDTASVLLEAMEYIQFLHEQIK L +P   L    +   QEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ
Subjt:  QTDTASVLLEAMEYIQFLHEQIK-LASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ

A0A6J1DQ86 transcription factor bHLH154-like isoform X23.2e-3083.52Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIK-LASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ
        +TDTASVLLEAMEYIQFLHEQIK L +P   L    +   QEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ
Subjt:  QTDTASVLLEAMEYIQFLHEQIK-LASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ

SwissProt top hitse value%identityAlignment
Q7XJU1 Transcription factor bHLH1541.4e-1758.75Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS
        +TDTASVLLE M+YIQFL EQ+K+ S   +  T S    +E+E +SL S GLCLVP+  TS +A  NGADIWAPVKT +S
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS

Q7XJU2 Transcription factor bHLH1532.6e-1656.25Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS
        +TDTASVLL+AM YI+FLHEQ+K+ S    L T      +E+E +SL + GLCLVP+ +T  +A  NGADIWAPVKT  S
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS

Q8GXT3 Transcription factor bHLH1231.4e-0639.02Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQE--------IEPWSLGSNGLCLVPIASTSRIASCNGADIWAP
        +TD ASVL EA+EYI+FLH+Q+   S   + +  S+   Q          E   L S GLCLVP++ST  +      D W P
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQE--------IEPWSLGSNGLCLVPIASTSRIASCNGADIWAP

Q94JL3 Transcription factor bHLH1122.0e-0842.86Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEI----------EPWSLGSNGLCLVPIASTSRIASCNGADIWAP
        +TDTASVL EA+EYI+FLH+Q+ + S   +    S    Q+I          E   L  +GLCLVPI+ST  +A+   AD W P
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEI----------EPWSLGSNGLCLVPIASTSRIASCNGADIWAP

Q9LT67 Transcription factor bHLH1132.6e-0845.12Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIK-LASP-------DSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAP
        +TD ASVL EAM YI+FL +QI+ L SP       D  + T  V    + +   L S GLCLVP++ST  + + NGAD W+P
Subjt:  QTDTASVLLEAMEYIQFLHEQIK-LASP-------DSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAP

Arabidopsis top hitse value%identityAlignment
AT1G05710.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.8e-1756.25Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS
        +TDTASVLL+AM YI+FLHEQ+K+ S    L T      +E+E +SL + GLCLVP+ +T  +A  NGADIWAPVKT  S
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS

AT1G05710.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.8e-1756.25Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS
        +TDTASVLL+AM YI+FLHEQ+K+ S    L T      +E+E +SL + GLCLVP+ +T  +A  NGADIWAPVKT  S
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS

AT1G05710.4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.8e-1756.25Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS
        +TDTASVLL+AM YI+FLHEQ+K+ S    L T      +E+E +SL + GLCLVP+ +T  +A  NGADIWAPVKT  S
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS

AT1G05710.5 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.8e-1756.25Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS
        +TDTASVLL+AM YI+FLHEQ+K+ S    L T      +E+E +SL + GLCLVP+ +T  +A  NGADIWAPVKT  S
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS

AT2G31730.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein9.7e-1958.75Show/hide
Query:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS
        +TDTASVLLE M+YIQFL EQ+K+ S   +  T S    +E+E +SL S GLCLVP+  TS +A  NGADIWAPVKT +S
Subjt:  QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGACAGACACAGCTTCTGTTCTTCTGGAGGCAATGGAATACATACAATTTCTTCATGAACAAATTAAGTTAGCCTCTCCTGACTCTATTTTAACCACTTGCTCTGTCTG
TCTCTATCAGGAAATTGAGCCGTGGAGCTTGGGAAGCAATGGCTTATGTCTCGTGCCGATCGCCTCGACTAGCCGAATTGCTAGCTGCAATGGTGCAGACATCTGGGCTC
CTGTCAAGACTTCTTCCTCGGACATTGAGAAGAATGTCTTGGAGTTACAA
mRNA sequenceShow/hide mRNA sequence
CAGACAGACACAGCTTCTGTTCTTCTGGAGGCAATGGAATACATACAATTTCTTCATGAACAAATTAAGTTAGCCTCTCCTGACTCTATTTTAACCACTTGCTCTGTCTG
TCTCTATCAGGAAATTGAGCCGTGGAGCTTGGGAAGCAATGGCTTATGTCTCGTGCCGATCGCCTCGACTAGCCGAATTGCTAGCTGCAATGGTGCAGACATCTGGGCTC
CTGTCAAGACTTCTTCCTCGGACATTGAGAAGAATGTCTTGGAGTTACAA
Protein sequenceShow/hide protein sequence
QTDTASVLLEAMEYIQFLHEQIKLASPDSILTTCSVCLYQEIEPWSLGSNGLCLVPIASTSRIASCNGADIWAPVKTSSSDIEKNVLELQ