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MS002954 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002954
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationscaffold595_1:371696..371902
RNA-Seq ExpressionMS002954
SyntenyMS002954
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656810.1 uncharacterized protein LOC101208994 [Cucumis sativus]3.7e-2892.75Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        MADWGP+FVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHS+LYFGLICVFLLA+KVHLYIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

XP_022155443.1 uncharacterized protein LOC111022585 [Momordica charantia]1.1e-29100Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

XP_022960371.1 uncharacterized protein LOC111461116 [Cucurbita moschata]2.2e-2895.65Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHSLLYFGLICVFLLA+KVHLYIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

XP_022991385.1 uncharacterized protein LOC111488037 isoform X2 [Cucurbita maxima]3.7e-2894.2Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHS+LYFGLICVFLLA+KVHLYIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

XP_038875875.1 uncharacterized protein LOC120068234 [Benincasa hispida]6.3e-2892.75Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAA+I+VHS+LYFGLICVFLLA+KVHLYIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

TrEMBL top hitse value%identityAlignment
A0A0A0KAG8 Uncharacterized protein1.8e-2892.75Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        MADWGP+FVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHS+LYFGLICVFLLA+KVHLYIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

A0A6J1DMZ2 uncharacterized protein LOC1110225855.5e-30100Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

A0A6J1H7E6 uncharacterized protein LOC1114611161.0e-2895.65Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHSLLYFGLICVFLLA+KVHLYIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

A0A6J1JSS9 uncharacterized protein LOC111488037 isoform X21.8e-2894.2Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHS+LYFGLICVFLLA+KVHLYIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

A0A6J1KVP8 uncharacterized protein LOC1114976231.0e-2895.65Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        MADWGPVFVAVILFVLLTPGLLFQLPG+RRCLEFGNFHTSAAAI+VHSLLYFGLICVFLLA+KVHLYIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01940.1 Protein of unknown function (DUF 3339)1.8e-1758.21Show/hide
Query:  ADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYI
        ADWGPV VAV+LFV+L+PGLLFQLP  RR LE GN  TS  +ILVH++L+F +I + ++A+++H++I
Subjt:  ADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYI

AT3G27030.1 unknown protein2.0e-1962.12Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHL
        M DWGPVFVAV LFVLLTPGLL Q+PG  R +EFG F TS  +++VH+L+YF L+C+ LLA+++H+
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHL

AT3G48660.1 Protein of unknown function (DUF 3339)2.7e-2165.22Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        MADWGPV VAVILFVLLTPGLLFQ+P   R +EFGN  TS A+ILVH++++FGLI +F +A+++H+Y G
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

AT5G08391.1 Protein of unknown function (DUF 3339)5.3e-2572.46Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        M+DWGPV V VILFV+LTPGLLFQLPG ++ +EFGNF TSA +++VHSLLYF L+CVFLLA+K+H+YIG
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG

AT5G63500.1 Protein of unknown function (DUF 3339)3.0e-2062.32Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG
        MADWGPV +AVILFV+L+PGLLFQ+P   R +EFGN  TS A+ILVH++++FGLI +F +A+ VH+Y G
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTGGGGGCCAGTTTTTGTGGCTGTGATACTGTTTGTTTTGCTAACTCCAGGGTTGCTCTTTCAGCTCCCTGGCCATCGCAGGTGCTTGGAGTTTGGCAACTT
TCACACCAGTGCCGCTGCCATTCTCGTTCACTCGCTTCTCTACTTCGGTCTCATTTGCGTCTTCTTGCTCGCCGTCAAGGTTCACCTCTACATCGGT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTGGGGGCCAGTTTTTGTGGCTGTGATACTGTTTGTTTTGCTAACTCCAGGGTTGCTCTTTCAGCTCCCTGGCCATCGCAGGTGCTTGGAGTTTGGCAACTT
TCACACCAGTGCCGCTGCCATTCTCGTTCACTCGCTTCTCTACTTCGGTCTCATTTGCGTCTTCTTGCTCGCCGTCAAGGTTCACCTCTACATCGGT
Protein sequenceShow/hide protein sequence
MADWGPVFVAVILFVLLTPGLLFQLPGHRRCLEFGNFHTSAAAILVHSLLYFGLICVFLLAVKVHLYIG