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MS002955 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002955
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold595_1:373979..374395
RNA-Seq ExpressionMS002955
SyntenyMS002955
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014655.1 hypothetical protein SDJN02_24834, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-5381.88Show/hide
Query:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
        M RP++DPQS  LHEISSLL+KILRSPPPPVPF+DHVLELSS ISSSS   PSSQ++P G A+LLLGISLALMLCGSVTFFLGF+LMPWILV VMIFY+V
Subjt:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV

Query:  GIVSSLSMLGRSILCCFSAPTPRKDFNGKFLICLCFLI
        GIVSS+SMLGRSILCCF+APTPRKDF+G+FL CLCFL+
Subjt:  GIVSSLSMLGRSILCCFSAPTPRKDFNGKFLICLCFLI

XP_022155438.1 uncharacterized protein LOC111022584 isoform X1 [Momordica charantia]1.6e-5996.99Show/hide
Query:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
        MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
Subjt:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV

Query:  GIVSSLSMLGRSILCCFSAPTPRKDFNGKFLIC
        GIVSSLSMLGRSILCCFSAPTPRKDFN +F  C
Subjt:  GIVSSLSMLGRSILCCFSAPTPRKDFNGKFLIC

XP_022155440.1 uncharacterized protein LOC111022584 isoform X2 [Momordica charantia]4.0e-58100Show/hide
Query:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
        MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
Subjt:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV

Query:  GIVSSLSMLGRSILCCFSAPTPRKDFN
        GIVSSLSMLGRSILCCFSAPTPRKDFN
Subjt:  GIVSSLSMLGRSILCCFSAPTPRKDFN

XP_022155441.1 uncharacterized protein LOC111022584 isoform X3 [Momordica charantia]4.0e-58100Show/hide
Query:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
        MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
Subjt:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV

Query:  GIVSSLSMLGRSILCCFSAPTPRKDFN
        GIVSSLSMLGRSILCCFSAPTPRKDFN
Subjt:  GIVSSLSMLGRSILCCFSAPTPRKDFN

XP_022155442.1 uncharacterized protein LOC111022584 isoform X4 [Momordica charantia]6.2e-59100Show/hide
Query:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
        MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
Subjt:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV

Query:  GIVSSLSMLGRSILCCFSAPTPRKDFNG
        GIVSSLSMLGRSILCCFSAPTPRKDFNG
Subjt:  GIVSSLSMLGRSILCCFSAPTPRKDFNG

TrEMBL top hitse value%identityAlignment
A0A1S3CB48 uncharacterized protein LOC1034988451.4e-4883.72Show/hide
Query:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSG-LLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYV
        M   ++DP+S V HEISSLL+KILRSPPPPVPFSDHVLELSSVISSSS  +LPSSQ+TPAG A+LLLGISLALMLCGSVTFFLGF+LMPWILVLVMIFYV
Subjt:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSG-LLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYV

Query:  VGIVSSLSMLGRSILCCFSAPTPRKDFNG
        VGIVSSLS+LGRS++CCF+APTPRKDF+G
Subjt:  VGIVSSLSMLGRSILCCFSAPTPRKDFNG

A0A6J1DMF9 uncharacterized protein LOC111022584 isoform X22.0e-58100Show/hide
Query:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
        MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
Subjt:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV

Query:  GIVSSLSMLGRSILCCFSAPTPRKDFN
        GIVSSLSMLGRSILCCFSAPTPRKDFN
Subjt:  GIVSSLSMLGRSILCCFSAPTPRKDFN

A0A6J1DMY8 uncharacterized protein LOC111022584 isoform X17.9e-6096.99Show/hide
Query:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
        MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
Subjt:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV

Query:  GIVSSLSMLGRSILCCFSAPTPRKDFNGKFLIC
        GIVSSLSMLGRSILCCFSAPTPRKDFN +F  C
Subjt:  GIVSSLSMLGRSILCCFSAPTPRKDFNGKFLIC

A0A6J1DPD1 uncharacterized protein LOC111022584 isoform X43.0e-59100Show/hide
Query:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
        MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
Subjt:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV

Query:  GIVSSLSMLGRSILCCFSAPTPRKDFNG
        GIVSSLSMLGRSILCCFSAPTPRKDFNG
Subjt:  GIVSSLSMLGRSILCCFSAPTPRKDFNG

A0A6J1DRN9 uncharacterized protein LOC111022584 isoform X32.0e-58100Show/hide
Query:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
        MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV
Subjt:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVV

Query:  GIVSSLSMLGRSILCCFSAPTPRKDFN
        GIVSSLSMLGRSILCCFSAPTPRKDFN
Subjt:  GIVSSLSMLGRSILCCFSAPTPRKDFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27290.1 unknown protein2.7e-2855.81Show/hide
Query:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLE---------LSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWIL
        MRR R++ QSRV +++SSL++ +LRSPP P+   DH  +          S   SSSS  L  + I+P+G ASLLLGIS+ALMLCGSVTFF+GFLLMPW+L
Subjt:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLE---------LSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWIL

Query:  VLVMIFYVVGIVSSLSMLGRSILCCFSAP
         L+++FYV GIVS++SM+GRSILC    P
Subjt:  VLVMIFYVVGIVSSLSMLGRSILCCFSAP

AT1G27290.2 unknown protein2.7e-2855.81Show/hide
Query:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLE---------LSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWIL
        MRR R++ QSRV +++SSL++ +LRSPP P+   DH  +          S   SSSS  L  + I+P+G ASLLLGIS+ALMLCGSVTFF+GFLLMPW+L
Subjt:  MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLE---------LSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWIL

Query:  VLVMIFYVVGIVSSLSMLGRSILCCFSAP
         L+++FYV GIVS++SM+GRSILC    P
Subjt:  VLVMIFYVVGIVSSLSMLGRSILCCFSAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGGCCGCGAGAAGATCCGCAATCTAGGGTTTTGCATGAGATTTCGTCTCTGCTTATGAAAATTCTCCGATCGCCGCCACCGCCGGTGCCTTTTTCCGATCATGT
TCTTGAATTGTCGTCGGTTATTTCATCCTCGTCGGGATTATTGCCTTCGTCGCAGATTACACCGGCTGGACTTGCGTCGCTGCTGCTCGGAATTTCGCTGGCTTTGATGC
TCTGTGGATCGGTTACTTTCTTCCTTGGTTTCTTGTTAATGCCTTGGATTCTCGTGTTGGTGATGATTTTCTACGTGGTTGGGATTGTCTCCAGCCTCTCTATGTTGGGA
CGCTCTATACTTTGTTGTTTCTCCGCTCCAACGCCTCGGAAAGATTTTAATGGCAAGTTTCTTATCTGCCTCTGTTTTCTTATTCTA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGGCCGCGAGAAGATCCGCAATCTAGGGTTTTGCATGAGATTTCGTCTCTGCTTATGAAAATTCTCCGATCGCCGCCACCGCCGGTGCCTTTTTCCGATCATGT
TCTTGAATTGTCGTCGGTTATTTCATCCTCGTCGGGATTATTGCCTTCGTCGCAGATTACACCGGCTGGACTTGCGTCGCTGCTGCTCGGAATTTCGCTGGCTTTGATGC
TCTGTGGATCGGTTACTTTCTTCCTTGGTTTCTTGTTAATGCCTTGGATTCTCGTGTTGGTGATGATTTTCTACGTGGTTGGGATTGTCTCCAGCCTCTCTATGTTGGGA
CGCTCTATACTTTGTTGTTTCTCCGCTCCAACGCCTCGGAAAGATTTTAATGGCAAGTTTCTTATCTGCCTCTGTTTTCTTATTCTA
Protein sequenceShow/hide protein sequence
MRRPREDPQSRVLHEISSLLMKILRSPPPPVPFSDHVLELSSVISSSSGLLPSSQITPAGLASLLLGISLALMLCGSVTFFLGFLLMPWILVLVMIFYVVGIVSSLSMLG
RSILCCFSAPTPRKDFNGKFLICLCFLIL