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MS002957 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002957
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCleavage and polyadenylation specificity factor subunit 1
Genome locationscaffold595_1:394407..394585
RNA-Seq ExpressionMS002957
SyntenyMS002957
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QWT43305.1 kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris]6.9e-0447.46Show/hide
Query:  VPSNGGWIQIRELPFDRWHMEVFKLIRE-AGGILKIF-QTINLMDPMEIIIKVKPNSTG
        VPS G WI+IR L  D+W  + FKLI E  GG ++   +T+  MD ME  +KVK N  G
Subjt:  VPSNGGWIQIRELPFDRWHMEVFKLIRE-AGGILKIF-QTINLMDPMEIIIKVKPNSTG
TYK18666.1 cleavage and polyadenylation specificity factor subunit 1 [Cucumis melo var. makuwa]3.1e-0443.33Show/hide
Query:  VVPSNGGWIQIRELPFDRWHMEVFKLIREA-GGILKIF-QTINLMDPMEIIIKVKPNSTG
        VVPS GGWI++R +P   W++E F  I++A GG + +  +T +L D +E II++K N +G
Subjt:  VVPSNGGWIQIRELPFDRWHMEVFKLIREA-GGILKIF-QTINLMDPMEIIIKVKPNSTG
TrEMBL top hitse value%identityAlignment
A0A5A7TFK7 DUF4283 domain-containing protein5.7e-0443.33Show/hide
Query:  VVPSNGGWIQIRELPFDRWHMEVFKLIREA-GGILKIF-QTINLMDPMEIIIKVKPNSTG
        V+PS GGWI++R +P   W++E F  I +A GG +++  +T  L D  E  IK+K N TG
Subjt:  VVPSNGGWIQIRELPFDRWHMEVFKLIREA-GGILKIF-QTINLMDPMEIIIKVKPNSTG
A0A5D3D541 Cleavage and polyadenylation specificity factor subunit 11.5e-0443.33Show/hide
Query:  VVPSNGGWIQIRELPFDRWHMEVFKLIREA-GGILKIF-QTINLMDPMEIIIKVKPNSTG
        VVPS GGWI++R +P   W++E F  I++A GG + +  +T +L D +E II++K N +G
Subjt:  VVPSNGGWIQIRELPFDRWHMEVFKLIREA-GGILKIF-QTINLMDPMEIIIKVKPNSTG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGGTCCCATCTAATGGAGGTTGGATACAAATAAGGGAATTACCCTTTGATAGGTGGCATATGGAAGTCTTTAAGCTCATTAGGGAAGCTGGTGGAATATTGAAGATCTT
TCAAACCATCAATCTAATGGATCCTATGGAGATAATCATCAAGGTAAAGCCAAACAGTACGGGT
mRNA sequenceShow/hide mRNA sequence
GTGGTCCCATCTAATGGAGGTTGGATACAAATAAGGGAATTACCCTTTGATAGGTGGCATATGGAAGTCTTTAAGCTCATTAGGGAAGCTGGTGGAATATTGAAGATCTT
TCAAACCATCAATCTAATGGATCCTATGGAGATAATCATCAAGGTAAAGCCAAACAGTACGGGT
Protein sequenceShow/hide protein sequence
VVPSNGGWIQIRELPFDRWHMEVFKLIREAGGILKIFQTINLMDPMEIIIKVKPNSTG