; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS002958 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002958
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold595_1:402037..402614
RNA-Seq ExpressionMS002958
SyntenyMS002958
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2689901.1 hypothetical protein I3760_09G162400 [Carya illinoinensis]2.4e-1632.54Show/hide
Query:  ITHLQYADDTLIFCQ-DEENLETWWAFLNIFLKVACLFSNLEKTSLIGI-KIKKIGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTK
        ++HL +ADDTLIFC  D+E   +  A L  F  V+ L  NL K+ ++ +  +  +G   T     V  L + Y  LG   G  HK  + W+  ++K   K
Subjt:  ITHLQYADDTLIFCQ-DEENLETWWAFLNIFLKVACLFSNLEKTSLIGI-KIKKIGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTK

Query:  LENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKP------LKRHGRN------GEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNE
        L  WK   LSKGGR+TL  S L+ +P Y +SL   P      L+R  R+      G+  +  +++W ++ +P+S               LGI + +  N+
Subjt:  LENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKP------LKRHGRN------GEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNE

Query:  TLMHKWLWR
         L+ KWLWR
Subjt:  TLMHKWLWR

XP_009335445.1 PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri]2.0e-1533.82Show/hide
Query:  ITHLQYADDTLIF-CQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGI-----KIKKIG---CCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPT
        I+HLQ+ADDT+ F  +DE+        LN+F  ++ L  N  K S+ GI     K+K +     C   S+ +        + LG   G + K   FWDP 
Subjt:  ITHLQYADDTLIF-CQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGI-----KIKKIG---CCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPT

Query:  VDKFNTKLENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHK
        V+K   +L++WK   LSKGGRLTL   VL ++P Y +SL   P    GR  +  + F+ E         L +       K+   L +G  + Q E L+ K
Subjt:  VDKFNTKLENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHK

Query:  WLWR
        WLWR
Subjt:  WLWR

XP_016200256.1 uncharacterized protein LOC107641275 [Arachis ipaensis]1.2e-1532.83Show/hide
Query:  ITHLQYADDTLIFCQDEEN-LETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK--IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNT
        ++HLQ+ADDT++FC  EE+ +  +   L +F  ++ L  N EK+SLI I  ++  + C C         L + Y  LG S G   +    W P +DK   
Subjt:  ITHLQYADDTLIFCQDEEN-LETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK--IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNT

Query:  KLENW--KMLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHKWLWR
        KL  W  K+L+K G+L L  SVLN++P Y +SL   P     +     + F+       + M+L        PK    LG+G +  +N  L+ KW WR
Subjt:  KLENW--KMLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHKWLWR

XP_018810157.1 uncharacterized protein LOC108983081 [Juglans regia]1.2e-1531.58Show/hide
Query:  ITHLQYADDTLIFCQ-DEENLETWWAFLNIFLKVACLFSNLEKTSLIGI-KIKKIGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTK
        ++HL +ADDTL+FC+ D + L    A L  F   + L  N +K+ L+ +  +       +     V  L ++Y  LG   G   + SS WDP ++K   K
Subjt:  ITHLQYADDTLIFCQ-DEENLETWWAFLNIFLKVACLFSNLEKTSLIGI-KIKKIGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTK

Query:  LENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGR------------NGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNE
        LE WK   LSKGGRLTL  S+L+ +P Y +SL   P +   R             G++ +  ++ W ++  P+S               LGI   +  N 
Subjt:  LENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGR------------NGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNE

Query:  TLMHKWLWR
         L+ KWLWR
Subjt:  TLMHKWLWR

XP_020982485.1 uncharacterized protein LOC110273620 [Arachis duranensis]3.4e-1532.68Show/hide
Query:  ITHLQYADDTLIFCQDEEN-LETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK---------IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDP
        ++HLQ+ADDT++FC  EE+ +  +   L +F  ++ L  N EK+SLI I  ++         +GC   K  TL V      + LG S G   +    W P
Subjt:  ITHLQYADDTLIFCQDEEN-LETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK---------IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDP

Query:  TVDKFNTKLENW--KMLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMH
         +DK   KL  W  K+L+K G+L L  SVLN++P Y +SL   P     +     + F+       + M+L        PK    LG+G +  +N  L+ 
Subjt:  TVDKFNTKLENW--KMLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMH

Query:  KWLWR
        KW WR
Subjt:  KWLWR

TrEMBL top hitse value%identityAlignment
A0A803P465 Uncharacterized protein1.8e-1733.82Show/hide
Query:  ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKI---------KKIGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPT
        ++HLQ+ADDT+ F ++E++L      +  F  ++ L  NL K+ L+GI +         ++IGC        V    L Y  LG   G   +  SFW+P 
Subjt:  ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKI---------KKIGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPT

Query:  VDKFNTKLENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHK
        +DK   +L+ WK   LSKGGRLTL  SVL+++P Y +SL   P        +  + F+ E    S    L        P+    LGIG  + +N++L+ K
Subjt:  VDKFNTKLENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHK

Query:  WLWR
        WLWR
Subjt:  WLWR

A0A803P8A0 Uncharacterized protein7.4e-1632.35Show/hide
Query:  ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK---------IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPT
        ++HLQ+ADDTL F +DE++L+     +  F  ++ L  NL K+ L+GI +           IGC        V +  ++Y  LG   G   +  +FW+P 
Subjt:  ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK---------IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPT

Query:  VDKFNTKLENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHK
        +DK   +++ WK   LS+GGRLTL  SVL+++P Y +SL   P        +  + F  E   L+    L        P+    L IG  + +N+ L+ K
Subjt:  VDKFNTKLENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHK

Query:  WLWR
        WLWR
Subjt:  WLWR

A0A803QEA6 Uncharacterized protein1.5e-1633.82Show/hide
Query:  ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK---------IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPT
        ++HLQ+ADDTL F +DE +L+     +  F  ++ L  NL K+ L+GI + +         IGC        V R  ++Y  LG S G   +  SFW+P 
Subjt:  ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK---------IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPT

Query:  VDKFNTKLENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHK
        +DK   +++ WK   LS+GGRLTL  SVL+++P Y +SL   P        +  ++F  E   L+    L        P+    L IG    +N+ L+ K
Subjt:  VDKFNTKLENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHK

Query:  WLWR
        WLWR
Subjt:  WLWR

A0A803QI00 Uncharacterized protein1.3e-1532.84Show/hide
Query:  ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK---------IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPT
        I+HLQ+ADDTL F +DE +L      +  F  ++ L  NL K+ L+GI +++         IGC        V    ++Y  LG   G   +  +FW+P 
Subjt:  ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIKK---------IGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPT

Query:  VDKFNTKLENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHK
        +DK   +L+ WK   LS+GGRL L  SVL+++P Y +SL   P        +  + F  E   L+    L        P+    L IG  + +N+ L+ K
Subjt:  VDKFNTKLENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHK

Query:  WLWR
        WLWR
Subjt:  WLWR

A0A803QQM3 Uncharacterized protein8.8e-1733.33Show/hide
Query:  ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIK---------KIGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPT
        ++HLQ+ADDTL F +DE +L+     +  F  ++ L  NL K+ L+G+ +          +IGC        V R  ++Y  LG   G   +  SFW+P 
Subjt:  ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIK---------KIGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPT

Query:  VDKFNTKLENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHK
        +DK  T+++ WK   LS+GGRLTL  SVL+++P Y +SL   P        +  + F  E   L+    L        P+    L IG  + +N+ L+ K
Subjt:  VDKFNTKLENWK--MLSKGGRLTLASSVLNTIP-YMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHK

Query:  WLWR
        WLWR
Subjt:  WLWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCACTCATCTTCAATACGCCGATGATACTTTGATTTTTTGCCAAGACGAGGAAAACTTGGAAACATGGTGGGCTTTCCTTAACATCTTTTTGAAGGTTGCATGCCTGTT
CTCAAATCTTGAAAAGACTTCACTGATTGGTATCAAAATAAAAAAGATAGGCTGCTGTTGTACCAAGTCTTTCACTTTGGTTGTAAGGCTGATGCTCTCCTATCGTTTAC
TTGGGTGTTCCACTGGGGTAAAACACAAATGTTCTTCTTTTTGGGATCCCACAGTGGATAAGTTTAATACCAAGCTCGAAAATTGGAAGATGTTGTCTAAGGGAGGGAGA
CTAACTCTTGCATCGTCCGTTTTGAATACCATCCCCTATATGATTTCTCTTTCTTCAAAGCCCTTAAAAAGACATGGCAGAAATGGAGAAGATAGTCAGAAATTTATTTT
GGAATGGTACCGGTTATCATCCCCAATGTCATTGAGTGAATTGGGACCAAACTTCCCTCCAAAAGATCCATGGAGCCTTGGGATTGGTACTTCCAAACAACAGAATGAGA
CCTTAATGCATAAATGGTTGTGGAGA
mRNA sequenceShow/hide mRNA sequence
ATCACTCATCTTCAATACGCCGATGATACTTTGATTTTTTGCCAAGACGAGGAAAACTTGGAAACATGGTGGGCTTTCCTTAACATCTTTTTGAAGGTTGCATGCCTGTT
CTCAAATCTTGAAAAGACTTCACTGATTGGTATCAAAATAAAAAAGATAGGCTGCTGTTGTACCAAGTCTTTCACTTTGGTTGTAAGGCTGATGCTCTCCTATCGTTTAC
TTGGGTGTTCCACTGGGGTAAAACACAAATGTTCTTCTTTTTGGGATCCCACAGTGGATAAGTTTAATACCAAGCTCGAAAATTGGAAGATGTTGTCTAAGGGAGGGAGA
CTAACTCTTGCATCGTCCGTTTTGAATACCATCCCCTATATGATTTCTCTTTCTTCAAAGCCCTTAAAAAGACATGGCAGAAATGGAGAAGATAGTCAGAAATTTATTTT
GGAATGGTACCGGTTATCATCCCCAATGTCATTGAGTGAATTGGGACCAAACTTCCCTCCAAAAGATCCATGGAGCCTTGGGATTGGTACTTCCAAACAACAGAATGAGA
CCTTAATGCATAAATGGTTGTGGAGA
Protein sequenceShow/hide protein sequence
ITHLQYADDTLIFCQDEENLETWWAFLNIFLKVACLFSNLEKTSLIGIKIKKIGCCCTKSFTLVVRLMLSYRLLGCSTGVKHKCSSFWDPTVDKFNTKLENWKMLSKGGR
LTLASSVLNTIPYMISLSSKPLKRHGRNGEDSQKFILEWYRLSSPMSLSELGPNFPPKDPWSLGIGTSKQQNETLMHKWLWR