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MS002964 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS002964
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold595_1:530659..531009
RNA-Seq ExpressionMS002964
SyntenyMS002964
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039815.1 hypothetical protein E6C27_scaffold122G00900 [Cucumis melo var. makuwa]7.1e-2465.18Show/hide
Query:  MEKNQKRRGFMKRLFRAARSRVKANEKQTNSPAPSTS-LTGGGGGSFAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATYILY
        MEKNQKR+GF++RL+RAARS  KA  KQTN P PSTS  +G G  SFA SSE  SAS PNR   A  VQ      +G   GGYGGGDENVDVKAATYIL 
Subjt:  MEKNQKRRGFMKRLFRAARSRVKANEKQTNSPAPSTS-LTGGGGGSFAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATYILY

Query:  VRERLKIERSVD
        V+ERLK+ERS+D
Subjt:  VRERLKIERSVD

KAF3944789.1 hypothetical protein CMV_028773 [Castanea mollissima]2.2e-0440.34Show/hide
Query:  MEKNQKRRGFMKRLFRAARSRVKANEKQTN-SPAPSTSLTGGG-GGSFAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYG-GGDENVDVKAATYI
        MEK+  RR F+K +++A R  V  +   +   P P  S  G   G SF     + + S    +A   A   GLR  NG   G    GGDENVD+KAA+YI
Subjt:  MEKNQKRRGFMKRLFRAARSRVKANEKQTN-SPAPSTSLTGGG-GGSFAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYG-GGDENVDVKAATYI

Query:  LYVRERLKIERSVDWDQKV
         YVRER K E+ VD D ++
Subjt:  LYVRERLKIERSVDWDQKV

KAG6592959.1 hypothetical protein SDJN03_12435, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1756.9Show/hide
Query:  MKRLFRAARS--RVKANEKQTNSPAP---STSLTGGGG-GSFAVSSEMRSASYPNR--------QAPAMAVQGGLRDGNGGVRGGYG--GGDENVDVKAA
        M+RL+RAARS  + KA  KQ+N PA    +T   G GG G F   SEMRS SYPN+        Q  A +  GG RDGNG +RG YG  GGDENVDVKA 
Subjt:  MKRLFRAARS--RVKANEKQTNSPAP---STSLTGGGG-GSFAVSSEMRSASYPNR--------QAPAMAVQGGLRDGNGGVRGGYG--GGDENVDVKAA

Query:  TYILYVRERLKIERSV
        TYIL+VRERLK+ERS+
Subjt:  TYILYVRERLKIERSV

KGN46459.1 hypothetical protein Csa_005040 [Cucumis sativus]1.8e-2261.61Show/hide
Query:  MEKNQKRRGFMKRLFRAARSRVKANEKQTNSPAPSTSLTGGGGGS-FAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATYILY
        ME  QKR+GF++RL+RAARS  KA  KQ+N P PSTS   G G   FA SSE +SAS PNR   A  VQ      + G  GGYGGGDENVDVKAATYIL 
Subjt:  MEKNQKRRGFMKRLFRAARSRVKANEKQTNSPAPSTSLTGGGGGS-FAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATYILY

Query:  VRERLKIERSVD
        V+ERLK+ERS+D
Subjt:  VRERLKIERSVD

PON54965.1 hypothetical protein TorRG33x02_300840 [Trema orientale]4.8e-0438.02Show/hide
Query:  MEKNQKRR---GFMKRLFRAARSRVKANEKQTNSPAPSTSLTGGGGGSFAV-SSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATY
        MEK QKRR   GFMK L+R A S+  + E++ +   PS  +  G   S     + + SA  P           G+ +       G  GGDENVD+KAA+Y
Subjt:  MEKNQKRR---GFMKRLFRAARSRVKANEKQTNSPAPSTSLTGGGGGSFAV-SSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATY

Query:  ILYVRERLKIERSVDWDQKVF
        I YVRER K++++ D DQ+++
Subjt:  ILYVRERLKIERSVDWDQKVF

TrEMBL top hitse value%identityAlignment
A0A0A0KCA4 Uncharacterized protein8.5e-2361.61Show/hide
Query:  MEKNQKRRGFMKRLFRAARSRVKANEKQTNSPAPSTSLTGGGGGS-FAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATYILY
        ME  QKR+GF++RL+RAARS  KA  KQ+N P PSTS   G G   FA SSE +SAS PNR   A  VQ      + G  GGYGGGDENVDVKAATYIL 
Subjt:  MEKNQKRRGFMKRLFRAARSRVKANEKQTNSPAPSTSLTGGGGGS-FAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATYILY

Query:  VRERLKIERSVD
        V+ERLK+ERS+D
Subjt:  VRERLKIERSVD

A0A2N9HFE1 Uncharacterized protein4.7e-0540.34Show/hide
Query:  MEKNQKRRGFMKRLFRAARSRVKANEKQTNSPAPSTSLTGGGGGSFAVSSEMRSASYPN-RQAPAMAVQGGLRDGNGGVRG-GYGGGDENVDVKAATYIL
        MEKN K R FMK +   A+S + A       P P +  +    G  +       +S P  +  P+ A   GL   +G VRG    GGDENVD+KAA+YI 
Subjt:  MEKNQKRRGFMKRLFRAARSRVKANEKQTNSPAPSTSLTGGGGGSFAVSSEMRSASYPN-RQAPAMAVQGGLRDGNGGVRG-GYGGGDENVDVKAATYIL

Query:  YVRERLKIERSVDWDQKVF
        YVRERLK+E+ VD D + +
Subjt:  YVRERLKIERSVDWDQKVF

A0A2P5C1U5 Uncharacterized protein2.3e-0438.02Show/hide
Query:  MEKNQKRR---GFMKRLFRAARSRVKANEKQTNSPAPSTSLTGGGGGSFAV-SSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATY
        MEK QKRR   GFMK L+R A S+  + E++ +   PS  +  G   S     + + SA  P           G+ +       G  GGDENVD+KAA+Y
Subjt:  MEKNQKRR---GFMKRLFRAARSRVKANEKQTNSPAPSTSLTGGGGGSFAV-SSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATY

Query:  ILYVRERLKIERSVDWDQKVF
        I YVRER K++++ D DQ+++
Subjt:  ILYVRERLKIERSVDWDQKVF

A0A5A7TED2 Uncharacterized protein3.5e-2465.18Show/hide
Query:  MEKNQKRRGFMKRLFRAARSRVKANEKQTNSPAPSTS-LTGGGGGSFAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATYILY
        MEKNQKR+GF++RL+RAARS  KA  KQTN P PSTS  +G G  SFA SSE  SAS PNR   A  VQ      +G   GGYGGGDENVDVKAATYIL 
Subjt:  MEKNQKRRGFMKRLFRAARSRVKANEKQTNSPAPSTS-LTGGGGGSFAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATYILY

Query:  VRERLKIERSVD
        V+ERLK+ERS+D
Subjt:  VRERLKIERSVD

A0A7N2L8U0 Uncharacterized protein8.9e-0440.18Show/hide
Query:  MEKNQKRRGFMKRLFRAARSRV---KANEKQTNSPAPSTSLTGGGGGSFAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRG-GYGGGDENVDVKAATY
        MEK  KRR F+K +++AA+  V   + + K   SP PS       G SF     + + S    +A   A   GL   NG   G     GDENVD+KAA+Y
Subjt:  MEKNQKRRGFMKRLFRAARSRV---KANEKQTNSPAPSTSLTGGGGGSFAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRG-GYGGGDENVDVKAATY

Query:  ILYVRERLKIER
        I YVRER K E+
Subjt:  ILYVRERLKIER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAATCAGAAGCGGAGAGGCTTCATGAAGCGCCTGTTTCGAGCCGCGAGATCCCGCGTCAAAGCCAATGAGAAGCAAACCAACTCGCCGGCGCCGTCTACATC
GTTAACCGGCGGCGGCGGCGGATCGTTTGCGGTGTCTAGCGAGATGAGATCTGCAAGTTATCCGAACAGGCAGGCGCCGGCGATGGCGGTGCAGGGCGGACTCCGCGACG
GAAACGGTGGAGTGCGGGGAGGTTACGGCGGCGGCGATGAGAACGTGGACGTGAAGGCGGCGACTTACATTTTGTACGTTAGAGAGCGTTTGAAGATCGAGAGATCAGTG
GATTGGGATCAAAAGGTCTTC
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAAATCAGAAGCGGAGAGGCTTCATGAAGCGCCTGTTTCGAGCCGCGAGATCCCGCGTCAAAGCCAATGAGAAGCAAACCAACTCGCCGGCGCCGTCTACATC
GTTAACCGGCGGCGGCGGCGGATCGTTTGCGGTGTCTAGCGAGATGAGATCTGCAAGTTATCCGAACAGGCAGGCGCCGGCGATGGCGGTGCAGGGCGGACTCCGCGACG
GAAACGGTGGAGTGCGGGGAGGTTACGGCGGCGGCGATGAGAACGTGGACGTGAAGGCGGCGACTTACATTTTGTACGTTAGAGAGCGTTTGAAGATCGAGAGATCAGTG
GATTGGGATCAAAAGGTCTTC
Protein sequenceShow/hide protein sequence
MEKNQKRRGFMKRLFRAARSRVKANEKQTNSPAPSTSLTGGGGGSFAVSSEMRSASYPNRQAPAMAVQGGLRDGNGGVRGGYGGGDENVDVKAATYILYVRERLKIERSV
DWDQKVF