CuGenDBv2

Gene ID	MS003012
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Plant protein of unknown function (DUF247)
Genome location	scaffold595_1:1029437..1029967
RNA-Seq Expression	MS003012
Synteny	MS003012
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR004158 - Protein of unknown function DUF247, plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_016902479.1 PREDICTED: uncharacterized protein LOC103499077 [Cucumis melo]

2.2e-53

62.71

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Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T LH+AGI+FRRS+++S+ D+ F  K GVL+LP + VDDDTE+  LNVMAFEKLH +  S VT F++LMNNLID+D+DV LL+ NKII NALGND+DAA+
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LF  LG+G ALDL  +S+I  V  +V++HC  R ++WCA+LKHNYFQ+PWAI+SLI A  GF+ILI+QAVYQI DY+
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

XP_022148888.1 UPF0481 protein At3g47200-like [Momordica charantia]

1.3e-90

97.18

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Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLP+MVVDDDTESTFLNVMAFEKLHK+AGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LFGRL QGAALDLKSDSHITHVQEMV EHC KRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

XP_023004238.1 UPF0481 protein At3g47200-like isoform X1 [Cucurbita maxima]

4.8e-56

63.28

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Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T+LHEAGI+F+RS+++S+ DVWFD KRGVL LP+++VDDDTEST LNVMAFEKLH  AG KVT F++LM+NLID ++DVA+LA  KI+ NA+GND++AA 
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LF RLG GAA+ L  DSH+  V +MV+ HC +  ++ CA+LKH+YFQ PW I+SL AA  GF+ILILQA+YQ  DYY
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

XP_023004239.1 UPF0481 protein At3g47200-like isoform X2 [Cucurbita maxima]

4.8e-56

63.28

Show/hide

Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T+LHEAGI+F+RS+++S+ DVWFD KRGVL LP+++VDDDTEST LNVMAFEKLH  AG KVT F++LM+NLID ++DVA+LA  KI+ NA+GND++AA 
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LF RLG GAA+ L  DSH+  V +MV+ HC +  ++ CA+LKH+YFQ PW I+SL AA  GF+ILILQA+YQ  DYY
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

XP_038875622.1 UPF0481 protein At3g47200-like [Benincasa hispida]

1.4e-58

66.1

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Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T+LH+AGI+F+ S +K++TDV F+ K+GVL+LP +VVDDDTE+T LNVMAFEKL+ +AGSKVT F++LMNNLIDVD+DVALLAS+KI+ NALGND+ AA+
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LF  LG+GAA+DL  DSHIT V   V++HC+   ++WCASLKH+YFQ+PWAI+SL AA  GF ILI+QA+YQI DY+
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E2L7 uncharacterized protein LOC103499077

1.1e-53

62.71

Show/hide

Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T LH+AGI+FRRS+++S+ D+ F  K GVL+LP + VDDDTE+  LNVMAFEKLH +  S VT F++LMNNLID+D+DV LL+ NKII NALGND+DAA+
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LF  LG+G ALDL  +S+I  V  +V++HC  R ++WCA+LKHNYFQ+PWAI+SLI A  GF+ILI+QAVYQI DY+
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

A0A6J1D5C0 UPF0481 protein At3g47200-like

6.5e-91

97.18

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Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLP+MVVDDDTESTFLNVMAFEKLHK+AGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LFGRL QGAALDLKSDSHITHVQEMV EHC KRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

A0A6J1KVQ6 UPF0481 protein At3g47200-like isoform X2

2.3e-56

63.28

Show/hide

Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T+LHEAGI+F+RS+++S+ DVWFD KRGVL LP+++VDDDTEST LNVMAFEKLH  AG KVT F++LM+NLID ++DVA+LA  KI+ NA+GND++AA 
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LF RLG GAA+ L  DSH+  V +MV+ HC +  ++ CA+LKH+YFQ PW I+SL AA  GF+ILILQA+YQ  DYY
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

A0A6J1KYV8 UPF0481 protein At3g47200-like isoform X1

2.3e-56

63.28

Show/hide

Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T+LHEAGI+F+RS+++S+ DVWFD KRGVL LP+++VDDDTEST LNVMAFEKLH  AG KVT F++LM+NLID ++DVA+LA  KI+ NA+GND++AA 
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LF RLG GAA+ L  DSH+  V +MV+ HC +  ++ CA+LKH+YFQ PW I+SL AA  GF+ILILQA+YQ  DYY
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

E5GB49 Uncharacterized protein

1.1e-53

62.71

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Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T LH+AGI+FRRS+++S+ D+ F  K GVL+LP + VDDDTE+  LNVMAFEKLH +  S VT F++LMNNLID+D+DV LL+ NKII NALGND+DAA+
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LF  LG+G ALDL  +S+I  V  +V++HC  R ++WCA+LKHNYFQ+PWAI+SLI A  GF+ILI+QAVYQI DY+
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

SwissProt top hits

e value

%identity

Alignment

P0C897 Putative UPF0481 protein At3g02645

5.2e-13

29.52

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Query:  LHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAELF
        LH+AG+RF+ +   +I+ V FD   G   LP + +D +TE+   N++A+E  +       T +  L+N +ID ++DV LL    ++++ L +DQ+AAE++
Subjt:  LHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAELF

Query:  GRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQ
           G   ++ L     +    E V+ + T R       L   Y    W I++ +AA L  +++ LQ
Subjt:  GRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQ

Q9SD53 UPF0481 protein At3g47200

1.5e-15

27.84

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Query:  RLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIIL-NALGNDQDAAE
        RL   GI+FR  +SK  + +    K+  L++P++  D    S FLN +AFE+ + D+ +++T +I+ M  L++ ++DV  L ++K+I+ N  G++ + +E
Subjt:  RLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIIL-NALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDY
         F  + +    ++ + S++ +V + V+E+  K  +   A  +H +F+ PW  +S  A     ++ +LQ+   I  Y
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDY

Arabidopsis top hits

e value

%identity

Alignment

AT3G50120.1 Plant protein of unknown function (DUF247)

1.7e-30

40.11

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Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T L EAGI+FRR ++    D+ F  K G L++P +++ D T+S FLN++AFE+ H D+ + +T +I+ M+NLID  +DV+ L    II + LG+D + A+
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LF RL Q    D + DS+++ +   V+ +   + + W A+LKH YF +PWAIVS  AA +  V+   Q+ Y +  YY
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

AT3G50130.1 Plant protein of unknown function (DUF247)

3.2e-26

36.72

Show/hide

Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T L EAGI+FR  ++    D+ F  K G L++P++++ D T+S F N++AFE+ H D+ + +T +I+ M+NLID  +DV  L    II + LGND + A+
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LF RL Q  A D   +S+++ +   V  + +++ +   A LKH YF +PWA  S  AA +  V+ + Q+ +    Y+
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

AT3G50140.1 Plant protein of unknown function (DUF247)

1.5e-26

35.03

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Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T L EAGI+F+R +S    D+ F  K G L++P++++ D T+S F N++A+E+ H D+ + +T +I+ M+NLID  +D+  L    II + LGND + A+
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        +F RL Q  A DL+ +++++ +   V  +  ++ +   A+LKH YF +PWA  S  AA +  ++ + Q+ +    Y+
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

AT3G50150.1 Plant protein of unknown function (DUF247)

1.0e-24

33.33

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Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T L  AG+ F R ++  + D+ F  K G LK+P++++ D T+S F N++AFE+ H  + + +T +I+ M+NLI+  QDV+ L  + II + LG+D + A+
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LF RL +    D K D +++ +   V+ + +++ +   A+L+  YF +PWA  S  AA +   +   Q+ + +  YY
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

AT3G50170.1 Plant protein of unknown function (DUF247)

1.5e-26

35.59

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Query:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE
        T L EAG++FR+ ++    D+ F  K G L++P++++ D T+S F N++AFE+ H ++ + +T +I+ M+NLI+  +DV+ L    II + LG+D + A+
Subjt:  TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAE

Query:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY
        LF RL Q    D K DSH++ +   V+ +  ++ +   A+L H YF +PWA  S  AA +  ++ + Q+ Y +  YY
Subjt:  LFGRLGQGAALDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ACACGGCTTCATGAAGCGGGGATCAGATTCAGGCGGAGCCAAAGCAAGAGCATTACGGACGTGTGGTTCGACGAGAAAAGAGGTGTGTTGAAGCTGCCGGAAATGGTAGT
GGACGATGACACCGAATCAACTTTCCTAAATGTGATGGCGTTCGAGAAACTCCACAAGGATGCTGGCAGCAAAGTCACGTGTTTCATTCTCCTCATGAACAATCTGATAG
ACGTGGACCAAGATGTGGCGCTGCTGGCCTCCAATAAGATAATACTGAATGCCCTCGGGAACGATCAAGACGCGGCGGAGTTGTTCGGTCGGCTGGGGCAAGGCGCGGCA
TTGGATTTAAAGTCGGACAGCCACATAACTCATGTGCAAGAGATGGTGCATGAGCATTGCACAAAGCGACGGCATAAATGGTGTGCAAGTCTCAAACACAACTATTTTCA
ACACCCATGGGCTATCGTCTCCCTCATTGCTGCTGCTTTGGGTTTCGTCATCCTAATTCTCCAGGCCGTCTACCAAATATGTGACTACTAC

mRNA sequence

Show/hide mRNA sequence

Protein sequence

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TRLHEAGIRFRRSQSKSITDVWFDEKRGVLKLPEMVVDDDTESTFLNVMAFEKLHKDAGSKVTCFILLMNNLIDVDQDVALLASNKIILNALGNDQDAAELFGRLGQGAA
LDLKSDSHITHVQEMVHEHCTKRRHKWCASLKHNYFQHPWAIVSLIAAALGFVILILQAVYQICDYY

MS003012 (gene) of Bitter gourd (TR) v1 genome