; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003022 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003022
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA repair RAD52-like protein 2, chloroplastic
Genome locationscaffold595_1:1121400..1121623
RNA-Seq ExpressionMS003022
SyntenyMS003022
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145544.1 DNA repair RAD52-like protein 2, chloroplastic [Cucumis sativus]4.5e-0867.31Show/hide
Query:  SSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS
        SSY  +E RL  TS + R RHL LV  SSDAN +KK VPN+NYVVPLNKSFS
Subjt:  SSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS

XP_022940851.1 DNA repair RAD52-like protein 2, chloroplastic [Cucurbita moschata]6.9e-0967.8Show/hide
Query:  PKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS
        P FS  PSSY ++E RL Q S + R RHLHLV  SSDA+G KK VPN NYVVPLNKSFS
Subjt:  PKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS

XP_022982164.1 DNA repair RAD52-like protein 2, chloroplastic [Cucurbita maxima]2.0e-0866.1Show/hide
Query:  PKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS
        P FS  PSSY ++E RL Q S + R RHLHLV  SS+A+G KK VPN NYVVPLNKSFS
Subjt:  PKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS

XP_023522333.1 DNA repair RAD52-like protein 2, chloroplastic [Cucurbita pepo subsp. pepo]6.9e-0967.8Show/hide
Query:  PKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS
        P FS  PSSY ++E RL Q S + R RHLHLV  SSDA+G KK VPN NYVVPLNKSFS
Subjt:  PKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS

XP_038897318.1 DNA repair RAD52-like protein 2, chloroplastic [Benincasa hispida]3.4e-0861.02Show/hide
Query:  PKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS
        P     PSSY  +E RL   S + R R+L LV  SSDAN SKK VPN+NYVVPLNKSFS
Subjt:  PKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS

TrEMBL top hitse value%identityAlignment
A0A0A0L5X0 Uncharacterized protein2.2e-0867.31Show/hide
Query:  SSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS
        SSY  +E RL  TS + R RHL LV  SSDAN +KK VPN+NYVVPLNKSFS
Subjt:  SSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS

A0A1S4DZ99 uncharacterized protein LOC1034938181.8e-0765.38Show/hide
Query:  SSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS
        SSY  +E RL  +S + R  HL LV  SSDAN SKK VPN+NYVVPLNKSFS
Subjt:  SSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS

A0A6J1CZH9 DNA repair RAD52-like protein 2, chloroplastic3.7e-0867.27Show/hide
Query:  PPSSYVINETRLLQTSASRRGRHLHLVYG-SSDANGSKKAVPNANYVVPLNKSFS
        PPSSY +N T        RRGR LHL+ G SSDA+GSKK VPN+NYVVPLNKSFS
Subjt:  PPSSYVINETRLLQTSASRRGRHLHLVYG-SSDANGSKKAVPNANYVVPLNKSFS

A0A6J1FJJ9 DNA repair RAD52-like protein 2, chloroplastic3.3e-0967.8Show/hide
Query:  PKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS
        P FS  PSSY ++E RL Q S + R RHLHLV  SSDA+G KK VPN NYVVPLNKSFS
Subjt:  PKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS

A0A6J1J3T8 DNA repair RAD52-like protein 2, chloroplastic9.7e-0966.1Show/hide
Query:  PKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS
        P FS  PSSY ++E RL Q S + R RHLHLV  SS+A+G KK VPN NYVVPLNKSFS
Subjt:  PKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAAGCACTGTATATGTATCCAGCTCTCACGCCCTTGCCTTCCCTAAATTTTCCGGCCCTCCCTCTTCCTACGTTATTAATGAGACTCGACTCCTCCAAACTTCTGCCAG
TCGAAGAGGACGCCATCTTCATCTTGTCTATGGTAGCAGTGATGCTAATGGTAGTAAGAAGGCAGTGCCCAATGCCAACTATGTTGTTCCACTCAATAAATCATTTTCC
mRNA sequenceShow/hide mRNA sequence
GAAAGCACTGTATATGTATCCAGCTCTCACGCCCTTGCCTTCCCTAAATTTTCCGGCCCTCCCTCTTCCTACGTTATTAATGAGACTCGACTCCTCCAAACTTCTGCCAG
TCGAAGAGGACGCCATCTTCATCTTGTCTATGGTAGCAGTGATGCTAATGGTAGTAAGAAGGCAGTGCCCAATGCCAACTATGTTGTTCCACTCAATAAATCATTTTCC
Protein sequenceShow/hide protein sequence
ESTVYVSSSHALAFPKFSGPPSSYVINETRLLQTSASRRGRHLHLVYGSSDANGSKKAVPNANYVVPLNKSFS