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MS003048 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003048
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold234:180501..180827
RNA-Seq ExpressionMS003048
SyntenyMS003048
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578700.1 hypothetical protein SDJN03_23148, partial [Cucurbita argyrosperma subsp. sororia]1.8e-0842.73Show/hide
Query:  VNIVLSTPRHVGPSIVAV---GAAINALMVTRQALPSNFVVEIEVHVSDFVLFVEAYAARVEVQVLILAVVHKAADGLHASVTNPFAIFVTGLWLAYEEF
        +N+V++  R V P IV+V    A   A ++   ALP +  VEIE+HV + V F E  AA V+VQ   LAV H+A DG  ASV   +A+ V   W   EE 
Subjt:  VNIVLSTPRHVGPSIVAV---GAAINALMVTRQALPSNFVVEIEVHVSDFVLFVEAYAARVEVQVLILAVVHKAADGLHASVTNPFAIFVTGLWLAYEEF

Query:  EGGIGEEFVG
        +GG  +EF+G
Subjt:  EGGIGEEFVG
XP_022133592.1 uncharacterized protein LOC111006131 [Momordica charantia]1.4e-0560Show/hide
Query:  IVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVE
        +VLS P H  PSI+ +   ++ALMV  Q LPSNFVVEIE H+SDF  FVE
Subjt:  IVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVE
XP_023550074.1 uncharacterized protein LOC111808373 isoform X1 [Cucurbita pepo subsp. pepo]7.1e-1044.86Show/hide
Query:  VNIVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVEAYAARVEVQVLILAVVHKAADGLHASVTNPFAIFVTGLWLAYEEFEGG
        +N+V++  R VGP I A  A   A  +   ALP + +VEIE+HV + V   E  AA VEVQV+ LAV H+A DG  ASV  P+   V   W   EE +GG
Subjt:  VNIVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVEAYAARVEVQVLILAVVHKAADGLHASVTNPFAIFVTGLWLAYEEFEGG

Query:  IGEEFVG
          +EF+G
Subjt:  IGEEFVG
XP_023550075.1 uncharacterized protein LOC111808373 isoform X2 [Cucurbita pepo subsp. pepo]7.1e-1044.86Show/hide
Query:  VNIVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVEAYAARVEVQVLILAVVHKAADGLHASVTNPFAIFVTGLWLAYEEFEGG
        +N+V++  R VGP I A  A   A  +   ALP + +VEIE+HV + V   E  AA VEVQV+ LAV H+A DG  ASV  P+   V   W   EE +GG
Subjt:  VNIVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVEAYAARVEVQVLILAVVHKAADGLHASVTNPFAIFVTGLWLAYEEFEGG

Query:  IGEEFVG
          +EF+G
Subjt:  IGEEFVG
TrEMBL top hitse value%identityAlignment
A0A0A0KNV7 Uncharacterized protein2.1e-1547.71Show/hide
Query:  VNIVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVEAYAARVEVQVLILAVVHKAADGLHASVTNPFAIFVTGLWLAYEEFEGG
        +N+VL   R+VGP+I A+  A +  ++   ALP +F+VEIE HV + V+ VE   A VE+QV+ LAVVHKA D   A V NPFA  V G W  + E EGG
Subjt:  VNIVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVEAYAARVEVQVLILAVVHKAADGLHASVTNPFAIFVTGLWLAYEEFEGG

Query:  IGEEFVGNW
          E+F+ +W
Subjt:  IGEEFVGNW
A0A0A0KU92 Uncharacterized protein3.9e-1445.95Show/hide
Query:  VNIVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVEAYAARVEVQV--LILAVVHKAADGLHASVTNPFAIFVTGLWLAYEEFE
        +N+VL   R+VGP+I  +   I+  ++   ALP +F+VEIE+HV +FV+ V+   ARVE+Q+    LAVVHKA D L A V   FA+   G W  ++E E
Subjt:  VNIVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVEAYAARVEVQV--LILAVVHKAADGLHASVTNPFAIFVTGLWLAYEEFE

Query:  GGIGEEFVGNW
        GG+ EEF+ NW
Subjt:  GGIGEEFVGNW
A0A6J1BX48 uncharacterized protein LOC1110061316.7e-0660Show/hide
Query:  IVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVE
        +VLS P H  PSI+ +   ++ALMV  Q LPSNFVVEIE H+SDF  FVE
Subjt:  IVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGAACATAGTACTTTCCACACCCCGACATGTAGGACCATCCATTGTTGCCGTGGGCGCGGCCATTAATGCTCTTATGGTTACACGACAAGCACTTCCCTCGAACTTTGT
TGTGGAGATTGAAGTCCATGTCTCCGATTTTGTGCTGTTTGTTGAGGCTTATGCAGCAAGGGTGGAGGTCCAAGTCCTTATTCTGGCAGTGGTACACAAAGCCGCTGATG
GGCTGCATGCAAGCGTCACAAATCCTTTTGCAATCTTCGTGACAGGCCTTTGGTTGGCTTATGAAGAATTTGAAGGTGGAATTGGGGAAGAATTCGTGGGAAATTGG
mRNA sequenceShow/hide mRNA sequence
GTGAACATAGTACTTTCCACACCCCGACATGTAGGACCATCCATTGTTGCCGTGGGCGCGGCCATTAATGCTCTTATGGTTACACGACAAGCACTTCCCTCGAACTTTGT
TGTGGAGATTGAAGTCCATGTCTCCGATTTTGTGCTGTTTGTTGAGGCTTATGCAGCAAGGGTGGAGGTCCAAGTCCTTATTCTGGCAGTGGTACACAAAGCCGCTGATG
GGCTGCATGCAAGCGTCACAAATCCTTTTGCAATCTTCGTGACAGGCCTTTGGTTGGCTTATGAAGAATTTGAAGGTGGAATTGGGGAAGAATTCGTGGGAAATTGG
Protein sequenceShow/hide protein sequence
VNIVLSTPRHVGPSIVAVGAAINALMVTRQALPSNFVVEIEVHVSDFVLFVEAYAARVEVQVLILAVVHKAADGLHASVTNPFAIFVTGLWLAYEEFEGGIGEEFVGNW