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MS003068 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003068
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold234:241900..242190
RNA-Seq ExpressionMS003068
SyntenyMS003068
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578700.1 hypothetical protein SDJN03_23148, partial [Cucurbita argyrosperma subsp. sororia]8.0e-0540.59Show/hide
Query:  PIVVVVVG---IEALLLAPRALPSDFLVKVKVHNLVVVVSDFVMFLELHTIWVEVQVLILAVVHKAVDGHCASLA---SPSMGIWWGIEEFEGRIGEEFV
        PIV V V     EA +LAP ALP    V++++H     V + V F E+   WV+VQ   LAV H+A+DG  AS+A   +     WW  EE +G   +EF+
Subjt:  PIVVVVVG---IEALLLAPRALPSDFLVKVKVHNLVVVVSDFVMFLELHTIWVEVQVLILAVVHKAVDGHCASLA---SPSMGIWWGIEEFEGRIGEEFV

Query:  G
        G
Subjt:  G
XP_023550074.1 uncharacterized protein LOC111808373 isoform X1 [Cucurbita pepo subsp. pepo]1.5e-0644.19Show/hide
Query:  LAPRALPSDFLVKVKVHNLVVVVSDFVMFLELHTIWVEVQVLILAVVHKAVDGHCASLASPSMGI----WWGIEEFEGRIGEEFVG
        LAP ALP   LV++++H     V + V   E+   WVEVQV+ LAV H+A+DG  AS+A P  G+    WW  EE +G   +EF+G
Subjt:  LAPRALPSDFLVKVKVHNLVVVVSDFVMFLELHTIWVEVQVLILAVVHKAVDGHCASLASPSMGI----WWGIEEFEGRIGEEFVG
XP_023550075.1 uncharacterized protein LOC111808373 isoform X2 [Cucurbita pepo subsp. pepo]1.5e-0644.19Show/hide
Query:  LAPRALPSDFLVKVKVHNLVVVVSDFVMFLELHTIWVEVQVLILAVVHKAVDGHCASLASPSMGI----WWGIEEFEGRIGEEFVG
        LAP ALP   LV++++H     V + V   E+   WVEVQV+ LAV H+A+DG  AS+A P  G+    WW  EE +G   +EF+G
Subjt:  LAPRALPSDFLVKVKVHNLVVVVSDFVMFLELHTIWVEVQVLILAVVHKAVDGHCASLASPSMGI----WWGIEEFEGRIGEEFVG
TrEMBL top hitse value%identityAlignment
A0A0A0KNV7 Uncharacterized protein1.2e-0942.86Show/hide
Query:  PIVVVVVGIEALLLAPRALPSDFLVKVKVHNLVVVVSDFVMFLELHTIWVEVQVLILAVVHKAVDGHCASLASP----SMGIWWGIEEFEGRIGEEFV
        P + + +  +  LLAP ALP DFLV+++ H     V + V+ +E+ T  VE+QV+ LAVVHKA+D  CA +A+P      G WWG  E EG   E+F+
Subjt:  PIVVVVVGIEALLLAPRALPSDFLVKVKVHNLVVVVSDFVMFLELHTIWVEVQVLILAVVHKAVDGHCASLASP----SMGIWWGIEEFEGRIGEEFV
A0A0A0KU92 Uncharacterized protein1.3e-0843Show/hide
Query:  PIVVVVVGIEALLLAPRALPSDFLVKVKVHNLVVVVSDFVMFLELHTIWVEVQV--LILAVVHKAVDGHCASLAS----PSMGIWWGIEEFEGRIGEEFV
        P + + +GI+  LLAP ALP DFLV++++H     V +FV+ +++ T  VE+Q+    LAVVHKA+D  CA +A      + G WWG +E EG + EEF+
Subjt:  PIVVVVVGIEALLLAPRALPSDFLVKVKVHNLVVVVSDFVMFLELHTIWVEVQV--LILAVVHKAVDGHCASLAS----PSMGIWWGIEEFEGRIGEEFV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCCATTGTTGTCGTGGTCGTTGGCATTGAAGCTCTTCTTCTTGCACCACGTGCACTTCCCTCGGACTTTCTTGTCAAGGTTAAAGTACACAACCTTGTTGTCGTCGTCTC
TGACTTTGTAATGTTTCTTGAGCTCCATACAATTTGGGTGGAGGTTCAAGTTTTGATTTTGGCAGTGGTACACAAAGCCGTTGATGGGCATTGTGCAAGCCTCGCAAGTC
CTTCTATGGGAATTTGGTGGGGTATTGAAGAATTCGAAGGTCGAATTGGGGAAGAATTCGTGGGAAGTTTT
mRNA sequenceShow/hide mRNA sequence
CCCATTGTTGTCGTGGTCGTTGGCATTGAAGCTCTTCTTCTTGCACCACGTGCACTTCCCTCGGACTTTCTTGTCAAGGTTAAAGTACACAACCTTGTTGTCGTCGTCTC
TGACTTTGTAATGTTTCTTGAGCTCCATACAATTTGGGTGGAGGTTCAAGTTTTGATTTTGGCAGTGGTACACAAAGCCGTTGATGGGCATTGTGCAAGCCTCGCAAGTC
CTTCTATGGGAATTTGGTGGGGTATTGAAGAATTCGAAGGTCGAATTGGGGAAGAATTCGTGGGAAGTTTT
Protein sequenceShow/hide protein sequence
PIVVVVVGIEALLLAPRALPSDFLVKVKVHNLVVVVSDFVMFLELHTIWVEVQVLILAVVHKAVDGHCASLASPSMGIWWGIEEFEGRIGEEFVGSF