; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003091 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003091
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSnoaL-like domain-containing protein
Genome locationscaffold234:361720..362772
RNA-Seq ExpressionMS003091
SyntenyMS003091
Gene Ontology termsNA
InterPro domainsIPR002075 - Nuclear transport factor 2
IPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142769.1 uncharacterized protein LOC101216887 isoform X1 [Cucumis sativus]1.9e-7475.76Show/hide
Query:  MNSVLSPPSKSAAIFLNPKISAP-PCSF-FTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNC
        MNS+LS  S S  IF + K  +P P S  FT+  IP   PYS LR+ SSSSDNP V V SP T+APLD LRSAS+VVRDFY G+NR DL SV  LIA+NC
Subjt:  MNSVLSPPSKSAAIFLNPKISAP-PCSF-FTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNC

Query:  VYEDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
        VYEDLIFSRPFVGR+DILLFFKKFNDSISKDLQFVIDDISTEDSSA+GVLWHLEWKGKEFPFSKGCSFYRL   DG +QIIY RDSVEPA KPGEMAL
Subjt:  VYEDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL

XP_011655377.1 uncharacterized protein LOC101216887 isoform X2 [Cucumis sativus]1.9e-7475.76Show/hide
Query:  MNSVLSPPSKSAAIFLNPKISAP-PCSF-FTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNC
        MNS+LS  S S  IF + K  +P P S  FT+  IP   PYS LR+ SSSSDNP V V SP T+APLD LRSAS+VVRDFY G+NR DL SV  LIA+NC
Subjt:  MNSVLSPPSKSAAIFLNPKISAP-PCSF-FTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNC

Query:  VYEDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
        VYEDLIFSRPFVGR+DILLFFKKFNDSISKDLQFVIDDISTEDSSA+GVLWHLEWKGKEFPFSKGCSFYRL   DG +QIIY RDSVEPA KPGEMAL
Subjt:  VYEDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL

XP_022133956.1 uncharacterized protein LOC111006367 isoform X1 [Momordica charantia]4.3e-106100Show/hide
Query:  MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY
        MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY
Subjt:  MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY

Query:  EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
        EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
Subjt:  EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL

XP_022133957.1 uncharacterized protein LOC111006367 isoform X2 [Momordica charantia]4.3e-106100Show/hide
Query:  MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY
        MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY
Subjt:  MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY

Query:  EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
        EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
Subjt:  EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL

XP_022133958.1 uncharacterized protein LOC111006367 isoform X3 [Momordica charantia]3.4e-9599.44Show/hide
Query:  MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY
        MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY
Subjt:  MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY

Query:  EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQII
        EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQI+
Subjt:  EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQII

TrEMBL top hitse value%identityAlignment
A0A0A0KQZ4 SnoaL-like domain-containing protein9.4e-7575.76Show/hide
Query:  MNSVLSPPSKSAAIFLNPKISAP-PCSF-FTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNC
        MNS+LS  S S  IF + K  +P P S  FT+  IP   PYS LR+ SSSSDNP V V SP T+APLD LRSAS+VVRDFY G+NR DL SV  LIA+NC
Subjt:  MNSVLSPPSKSAAIFLNPKISAP-PCSF-FTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNC

Query:  VYEDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
        VYEDLIFSRPFVGR+DILLFFKKFNDSISKDLQFVIDDISTEDSSA+GVLWHLEWKGKEFPFSKGCSFYRL   DG +QIIY RDSVEPA KPGEMAL
Subjt:  VYEDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL

A0A5A7T2M8 SnoaL-like domain-containing protein1.0e-7374.87Show/hide
Query:  MNSVLSPPSKSAAIFLNPKISAPPCSF---FTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADN
        MNS+LS  S S  IF N K S PP      FT+  IP  T YS LR+ SSSSDNP V V SP T+APLD LRSAS VVR+FY G+NR DL SV  LIA+N
Subjt:  MNSVLSPPSKSAAIFLNPKISAPPCSF---FTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADN

Query:  CVYEDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
        CVYEDL+FSRPFVGR+DILLFFKKFNDSISKDLQFVIDDISTEDSSA+GVLWHLEWKGKEFPFSKGCSFYRL   DG +QIIY RDSVEPA KPGEMAL
Subjt:  CVYEDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL

A0A6J1BWM3 uncharacterized protein LOC111006367 isoform X12.1e-106100Show/hide
Query:  MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY
        MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY
Subjt:  MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY

Query:  EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
        EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
Subjt:  EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL

A0A6J1BY80 uncharacterized protein LOC111006367 isoform X22.1e-106100Show/hide
Query:  MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY
        MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY
Subjt:  MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY

Query:  EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
        EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
Subjt:  EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL

A0A6J1C0N1 uncharacterized protein LOC111006367 isoform X31.7e-9599.44Show/hide
Query:  MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY
        MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY
Subjt:  MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVY

Query:  EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQII
        EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQI+
Subjt:  EDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71480.1 Nuclear transport factor 2 (NTF2) family protein1.4e-5161.36Show/hide
Query:  PCSFFTASRI--PTRTPYSS-LRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVYEDLIFSRPFVGREDILLFFK
        P SFF  +++  PT   +S   RL  S+S  P    ++     P  A  SAS+VV  FY  +N  DL+SV  LIA +CVYEDL+FS PFVGR+ IL FF 
Subjt:  PCSFFTASRI--PTRTPYSS-LRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVYEDLIFSRPFVGREDILLFFK

Query:  KFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL
        KF +S S DLQFVIDDISTEDSSAVGV WHLEWKGK FPFSKGCSFYRL + DG RQI+YGRD VEPAIKPGE  L
Subjt:  KFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL

AT5G41470.1 Nuclear transport factor 2 (NTF2) family protein3.1e-2233.86Show/hide
Query:  SASDVVRDFYGGINRRDLTSVHHLIADNCVYEDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRL
        S  D V  FY  IN ++   +   I+ +C  +D  F +PF G+++ + FF++   S+ ++++F ++++   D  +  V WHLEWKG++ PF++GCSFY  
Subjt:  SASDVVRDFYGGINRRDLTSVHHLIADNCVYEDLIFSRPFVGREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRL

Query:  VIADGNRQIIYGRDSVEPAIKPGEMAL
        +   G   I   R  +E  IKPG + L
Subjt:  VIADGNRQIIYGRDSVEPAIKPGEMAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCGTCTTATCTCCTCCATCCAAATCCGCTGCCATTTTTTTAAACCCTAAGATTTCTGCTCCTCCATGCTCTTTTTTTACTGCTTCTCGAATACCTACGAGAAC
ACCGTATTCCTCGCTTCGTCTCTGCTCTTCTTCTTCAGATAATCCGCTTGTCGCCGTTTCATCTCCGACCACCAATGCTCCTCTTGACGCACTCCGATCTGCTTCTGATG
TCGTGAGGGACTTCTACGGCGGAATCAACCGCCGTGACCTCACCTCCGTCCACCACCTCATTGCTGACAACTGTGTTTATGAGGACCTTATCTTCTCTCGTCCTTTCGTC
GGTCGCGAGGACATTCTACTTTTTTTCAAAAAGTTCAACGATTCCATCAGCAAGGATCTACAGTTTGTTATCGACGATATATCCACCGAAGACTCATCAGCAGTGGGTGT
CCTTTGGCATTTAGAATGGAAAGGGAAAGAGTTTCCTTTCAGCAAGGGATGCAGCTTTTATCGCTTGGTTATTGCTGATGGCAATAGACAAATAATCTACGGCCGAGATA
GTGTTGAGCCTGCAATCAAGCCAGGGGAGATGGCTTTG
mRNA sequenceShow/hide mRNA sequence
ATGAACTCCGTCTTATCTCCTCCATCCAAATCCGCTGCCATTTTTTTAAACCCTAAGATTTCTGCTCCTCCATGCTCTTTTTTTACTGCTTCTCGAATACCTACGAGAAC
ACCGTATTCCTCGCTTCGTCTCTGCTCTTCTTCTTCAGATAATCCGCTTGTCGCCGTTTCATCTCCGACCACCAATGCTCCTCTTGACGCACTCCGATCTGCTTCTGATG
TCGTGAGGGACTTCTACGGCGGAATCAACCGCCGTGACCTCACCTCCGTCCACCACCTCATTGCTGACAACTGTGTTTATGAGGACCTTATCTTCTCTCGTCCTTTCGTC
GGTCGCGAGGACATTCTACTTTTTTTCAAAAAGTTCAACGATTCCATCAGCAAGGATCTACAGTTTGTTATCGACGATATATCCACCGAAGACTCATCAGCAGTGGGTGT
CCTTTGGCATTTAGAATGGAAAGGGAAAGAGTTTCCTTTCAGCAAGGGATGCAGCTTTTATCGCTTGGTTATTGCTGATGGCAATAGACAAATAATCTACGGCCGAGATA
GTGTTGAGCCTGCAATCAAGCCAGGGGAGATGGCTTTG
Protein sequenceShow/hide protein sequence
MNSVLSPPSKSAAIFLNPKISAPPCSFFTASRIPTRTPYSSLRLCSSSSDNPLVAVSSPTTNAPLDALRSASDVVRDFYGGINRRDLTSVHHLIADNCVYEDLIFSRPFV
GREDILLFFKKFNDSISKDLQFVIDDISTEDSSAVGVLWHLEWKGKEFPFSKGCSFYRLVIADGNRQIIYGRDSVEPAIKPGEMAL