; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003096 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003096
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger protein CONSTANS-LIKE 6
Genome locationscaffold234:384910..386289
RNA-Seq ExpressionMS003096
SyntenyMS003096
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR010402 - CCT domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142772.2 zinc finger protein CONSTANS-LIKE 6 [Cucumis sativus]8.1e-9167.47Show/hide
Query:  NNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENM-VEDRDSMHDENVALMFNSD--VVSSCCSLQSLSFL
        N+S+IKHPIRK RTKTRRPKFLSLRL+LT P+ S PM   P  P      Q+QLTLFPLHPEN+ VEDR    +++VA +F +D  V SSCCSLQ  SFL
Subjt:  NNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENM-VEDRDSMHDENVALMFNSD--VVSSCCSLQSLSFL

Query:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQLRLKLD
        P YQN+MSS EEESRNLV   EAE    LVR AMR+RERE   EEKWVCYSEVVEKKEEEVTSTAADEWV+K  + KKK K + I K +   KQL LKLD
Subjt:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQLRLKLD

Query:  YEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNR--CCGMGSEG--NSNNNNN----NVWKVPEM-------------EGWKMGQREASVLRY
        YEGILNAW DKAPL+INGESPQTVP+LHDD    SDSL +R    G+GSEG  +SNN NN    NVWKVPE+             EGWKMGQREASVLRY
Subjt:  YEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNR--CCGMGSEG--NSNNNNN----NVWKVPEM-------------EGWKMGQREASVLRY

Query:  KEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTF
        KEKRQSRLFSKRIRY+VRKLNAEKRPRMK  F
Subjt:  KEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTF

XP_008458850.1 PREDICTED: zinc finger protein CONSTANS-LIKE 6 [Cucumis melo]6.2e-9166.37Show/hide
Query:  NNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENM-VEDRDSMHDENVALMFNSD--VVSSCCSLQSLSFL
        N+S+IKHPIRK RTKTRRPKFLSLRL+LT P+   PM   P PP      Q+QLTLFPLHPEN+ VEDR    +++VA +F +D  V SSCCSLQ  SFL
Subjt:  NNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENM-VEDRDSMHDENVALMFNSD--VVSSCCSLQSLSFL

Query:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSRER-EAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEK----KYINKKKNKMEIIGKQKQKQKQL
        PSYQN+MSS EEESRNL    EAE    LVR AMR+RER E   EEKWVCYSEVVEKKEEEVTSTAADEWV+K    K   KKK KME+IG      KQL
Subjt:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSRER-EAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEK----KYINKKKNKMEIIGKQKQKQKQL

Query:  RLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNR--CCGMGSEGNSNNNNN--------NVWKVPEM-------------EGWKMGQR
         LKLDYEGILNAW DKAPL+INGESPQTVP+LHDD    SDSL +R    G+GSEG++++NNN        NVWKVPE+             EGWKMGQR
Subjt:  RLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNR--CCGMGSEGNSNNNNN--------NVWKVPEM-------------EGWKMGQR

Query:  EASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTF
        EASVLRYKEKRQSRLFSKRIRY+VRKLNAEKRPRMK  F
Subjt:  EASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTF

XP_022133666.1 zinc finger protein CONSTANS-LIKE 6 [Momordica charantia]6.3e-16097.41Show/hide
Query:  TNNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFLPS
        TNNSVIKHPIRKIRTKTRRPKFLSL LELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFLPS
Subjt:  TNNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFLPS

Query:  YQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQLRLKLDYE
        YQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQ     RLKLDYE
Subjt:  YQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQLRLKLDYE

Query:  GILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAE
        GILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAE
Subjt:  GILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAE

Query:  KRPRMKVTF
        KRPRMK  F
Subjt:  KRPRMKVTF

XP_022991153.1 zinc finger protein CONSTANS-LIKE 6-like [Cucurbita maxima]1.1e-8266.35Show/hide
Query:  TNNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNS--TPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFL
        T++SVI+ PIRK RTKTRRPKFLSLR EL  P+ S  +PM+  P  P      Q+QLTLFPLHPEN+VEDR    +ENVALMF +DVVSSCCSL   SFL
Subjt:  TNNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNS--TPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFL

Query:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAA-------DEWVEKKYINKKKNKMEIIGKQKQKQK
        P+Y NDMSS EEESRNL     AE  + LVR AMRSREREA  EEKWVCYSEVVEKKEE   + AA       +E  E      KK K+E+ G      K
Subjt:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAA-------DEWVEKKYINKKKNKMEIIGKQKQKQK

Query:  QLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIR
        QLRLKLDYEGILNAWSDKAPL+INGESPQTVPNLHDD    S    NR   MGSEG       NVWKVPE+ GWK+G REASVLRYKEKRQSRLFSKRIR
Subjt:  QLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIR

Query:  YQVRKLNAEKRPRMKVTF
        YQVRKLNAEKRPRMK  F
Subjt:  YQVRKLNAEKRPRMKVTF

XP_038889499.1 zinc finger protein CONSTANS-LIKE 16-like [Benincasa hispida]4.9e-8869.04Show/hide
Query:  NNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPM---SPRPKPPALQEQQQQQLTLFPLHPENM-VEDRDSMHDENVALMFNSDVV-SSCCSLQSLS
        N+S+IKHPIRK RTKTRRPKFLSLR EL  P+  TPM    P+P PP      Q+QLTLFPLHPEN+ +EDR    +ENV  +F +DVV SSCCSLQ  S
Subjt:  NNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPM---SPRPKPPALQEQQQQQLTLFPLHPENM-VEDRDSMHDENVALMFNSDVV-SSCCSLQSLS

Query:  FLPSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKE----EEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQ
        FLPSYQNDMSS EEESRNL     AE  + LVR AMRSRER+   EEKWVCYSEVVEK E    EEVTSTAADEWV+K  INK K K +I  K +   KQ
Subjt:  FLPSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKE----EEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQ

Query:  LRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNR--CCGMGSEGNSNNNNNNVWKVPEM----EGWKMGQREASVLRYKEKRQSRLF
        L LKLDYEGILNAW DKAPL+INGESPQTVP+L DD    SDSLPNR    GMGSEG+ N+NNNNVWKVPEM    + + +GQREASVLRYKEKRQSRLF
Subjt:  LRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNR--CCGMGSEGNSNNNNNNVWKVPEM----EGWKMGQREASVLRYKEKRQSRLF

Query:  SKRIRYQVRKLNAEKRPRMKVTF
        SKRIRY+VRKLNAEKRPRMK  F
Subjt:  SKRIRYQVRKLNAEKRPRMKVTF

TrEMBL top hitse value%identityAlignment
A0A0A0KR00 CCT domain-containing protein3.9e-9167.47Show/hide
Query:  NNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENM-VEDRDSMHDENVALMFNSD--VVSSCCSLQSLSFL
        N+S+IKHPIRK RTKTRRPKFLSLRL+LT P+ S PM   P  P      Q+QLTLFPLHPEN+ VEDR    +++VA +F +D  V SSCCSLQ  SFL
Subjt:  NNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENM-VEDRDSMHDENVALMFNSD--VVSSCCSLQSLSFL

Query:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQLRLKLD
        P YQN+MSS EEESRNLV   EAE    LVR AMR+RERE   EEKWVCYSEVVEKKEEEVTSTAADEWV+K  + KKK K + I K +   KQL LKLD
Subjt:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQLRLKLD

Query:  YEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNR--CCGMGSEG--NSNNNNN----NVWKVPEM-------------EGWKMGQREASVLRY
        YEGILNAW DKAPL+INGESPQTVP+LHDD    SDSL +R    G+GSEG  +SNN NN    NVWKVPE+             EGWKMGQREASVLRY
Subjt:  YEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNR--CCGMGSEG--NSNNNNN----NVWKVPEM-------------EGWKMGQREASVLRY

Query:  KEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTF
        KEKRQSRLFSKRIRY+VRKLNAEKRPRMK  F
Subjt:  KEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTF

A0A1S3C8T7 zinc finger protein CONSTANS-LIKE 63.0e-9166.37Show/hide
Query:  NNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENM-VEDRDSMHDENVALMFNSD--VVSSCCSLQSLSFL
        N+S+IKHPIRK RTKTRRPKFLSLRL+LT P+   PM   P PP      Q+QLTLFPLHPEN+ VEDR    +++VA +F +D  V SSCCSLQ  SFL
Subjt:  NNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENM-VEDRDSMHDENVALMFNSD--VVSSCCSLQSLSFL

Query:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSRER-EAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEK----KYINKKKNKMEIIGKQKQKQKQL
        PSYQN+MSS EEESRNL    EAE    LVR AMR+RER E   EEKWVCYSEVVEKKEEEVTSTAADEWV+K    K   KKK KME+IG      KQL
Subjt:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSRER-EAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEK----KYINKKKNKMEIIGKQKQKQKQL

Query:  RLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNR--CCGMGSEGNSNNNNN--------NVWKVPEM-------------EGWKMGQR
         LKLDYEGILNAW DKAPL+INGESPQTVP+LHDD    SDSL +R    G+GSEG++++NNN        NVWKVPE+             EGWKMGQR
Subjt:  RLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNR--CCGMGSEGNSNNNNN--------NVWKVPEM-------------EGWKMGQR

Query:  EASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTF
        EASVLRYKEKRQSRLFSKRIRY+VRKLNAEKRPRMK  F
Subjt:  EASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTF

A0A6J1BVT1 zinc finger protein CONSTANS-LIKE 63.1e-16097.41Show/hide
Query:  TNNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFLPS
        TNNSVIKHPIRKIRTKTRRPKFLSL LELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFLPS
Subjt:  TNNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFLPS

Query:  YQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQLRLKLDYE
        YQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQ     RLKLDYE
Subjt:  YQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQLRLKLDYE

Query:  GILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAE
        GILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAE
Subjt:  GILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAE

Query:  KRPRMKVTF
        KRPRMK  F
Subjt:  KRPRMKVTF

A0A6J1E890 protein CHLOROPLAST IMPORT APPARATUS 2-like5.2e-8366.77Show/hide
Query:  TNNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNS--TPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFL
        T++SVI+ PIRK RTKTRRPKFLSLR EL  PR S  +PM+  P  P      Q+QLTLFPLHPEN+VEDR    +ENVALMF +DVVSSCCSL   SFL
Subjt:  TNNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNS--TPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFL

Query:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAA------DEWVEK--KYINKKKNKMEIIGKQKQKQ
        P+Y NDMSS EEESRNL     AE  + LVR AMRSREREA  EEKWVCYSEVVEKKEE   + AA      +E VE+      KKK K +   K + + 
Subjt:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAA------DEWVEK--KYINKKKNKMEIIGKQKQKQ

Query:  KQLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRI
        KQLRLKLDYEGILNAWSDKAPL+INGESPQTVPNLHDD    S    NR   MGSEG       NVWKVPE+ GWK+G REASVLRYKEKRQSRLFSKRI
Subjt:  KQLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRI

Query:  RYQVRKLNAEKRPRMKVTF
        RYQVRKLNAEKRPRMK  F
Subjt:  RYQVRKLNAEKRPRMKVTF

A0A6J1JVC8 zinc finger protein CONSTANS-LIKE 6-like5.2e-8366.35Show/hide
Query:  TNNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNS--TPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFL
        T++SVI+ PIRK RTKTRRPKFLSLR EL  P+ S  +PM+  P  P      Q+QLTLFPLHPEN+VEDR    +ENVALMF +DVVSSCCSL   SFL
Subjt:  TNNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNS--TPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFL

Query:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAA-------DEWVEKKYINKKKNKMEIIGKQKQKQK
        P+Y NDMSS EEESRNL     AE  + LVR AMRSREREA  EEKWVCYSEVVEKKEE   + AA       +E  E      KK K+E+ G      K
Subjt:  PSYQNDMSSTEEESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAA-------DEWVEKKYINKKKNKMEIIGKQKQKQK

Query:  QLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIR
        QLRLKLDYEGILNAWSDKAPL+INGESPQTVPNLHDD    S    NR   MGSEG       NVWKVPE+ GWK+G REASVLRYKEKRQSRLFSKRIR
Subjt:  QLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIR

Query:  YQVRKLNAEKRPRMKVTF
        YQVRKLNAEKRPRMK  F
Subjt:  YQVRKLNAEKRPRMKVTF

SwissProt top hitse value%identityAlignment
Q8LG76 Zinc finger protein CONSTANS-LIKE 64.0e-0829.21Show/hide
Query:  QQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFLPSYQNDM--------SSTEEESRN------------------------LVG
        ++   +    L PE   ED+   ++    L+F   V++S    Q  +     QN+         SS EE+  N                        L+G
Subjt:  QQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFLPSYQNDM--------SSTEEESRN------------------------LVG

Query:  G--REAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTS-------------TAADEWVEKKYINKKKNKM-----EIIG--KQKQKQKQLRL
        G  RE      L    M   E+E  EEE  V   EV ++ E + TS             T  DE  E +  +  KN M     E+ G  K+++K+K L L
Subjt:  G--REAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTS-------------TAADEWVEKKYINKKKNKM-----EIIG--KQKQKQKQLRL

Query:  KLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCG-MGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQV
        +LDYE +++ W         G+       +  +        P    G  G+E + +N+   +     +     G REA V RY+EKR++RLFSK+IRY+V
Subjt:  KLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCG-MGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQV

Query:  RKLNAEKRPRMKVTF
        RKLNAEKRPRMK  F
Subjt:  RKLNAEKRPRMKVTF

Q8RWD0 Zinc finger protein CONSTANS-LIKE 165.4e-1338.4Show/hide
Query:  KQKQKQKQLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSR
        K+++ +  L L+L+Y+ +++ W  + P + +GE P+   ++     FS          + + G S +    V       G+  G REA V RY+EKR++R
Subjt:  KQKQKQKQLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSR

Query:  LFSKRIRYQVRKLNAEKRPRMKVTF
        LFSK+IRY+VRKLNAEKRPRMK  F
Subjt:  LFSKRIRYQVRKLNAEKRPRMKVTF

Q9C9A9 Zinc finger protein CONSTANS-LIKE 71.1e-1038.58Show/hide
Query:  KQKQKQLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCG----MGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQ
        K ++  L L+LDY  +++AW +    +  G  P+ +       +  +  LP+   G    M S+G+               G   G+REA VLRYKEKR+
Subjt:  KQKQKQLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCG----MGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQ

Query:  SRLFSKRIRYQVRKLNAEKRPRMKVTF
        +RLFSK+IRY+VRKLNAE+RPR+K  F
Subjt:  SRLFSKRIRYQVRKLNAEKRPRMKVTF

Q9LU68 Protein CHLOROPLAST IMPORT APPARATUS 22.5e-1033.63Show/hide
Query:  REAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEK--------KEEEVTSTAADEWVEKKYI---------NKKKNKMEIIGKQKQKQKQLR-------
        R + G ++ +   +RS  RE  + + W  ++   E+        K E   ST  +E  + K +          KKK KM +      + K L        
Subjt:  REAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEK--------KEEEVTSTAADEWVEKKYI---------NKKKNKMEIIGKQKQKQKQLR-------

Query:  ------LKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLP--NRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLF
              LKLDY+G+L AWSDK        SP        D+I  S+++    R   +   G+S                  G REASVLRYKEKR++RLF
Subjt:  ------LKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLP--NRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLF

Query:  SKRIRYQVRKLNAEKRPRMKVTF
        SK+IRYQVRKLNA++RPRMK  F
Subjt:  SKRIRYQVRKLNAEKRPRMKVTF

Q9M9B3 Zinc finger protein CONSTANS-LIKE 87.8e-0428.81Show/hide
Query:  EEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQK-------QLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSD
        EE+     ++    EEE  +  A+    +  ++ KK+   +I   ++ ++         R +L+YE ++ AW  +       ESP+ V            
Subjt:  EEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQK-------QLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSD

Query:  SLPNRCCGMGSEGNSNNNNNNVWKVPE--MEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTF
                        NN ++   VP    E     +REA V RY++KR++RLF K+IRY+VRK+NA+KRPRMK  F
Subjt:  SLPNRCCGMGSEGNSNNNNNNVWKVPE--MEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTF

Arabidopsis top hitse value%identityAlignment
AT1G25440.1 B-box type zinc finger protein with CCT domain3.8e-1438.4Show/hide
Query:  KQKQKQKQLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSR
        K+++ +  L L+L+Y+ +++ W  + P + +GE P+   ++     FS          + + G S +    V       G+  G REA V RY+EKR++R
Subjt:  KQKQKQKQLRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSR

Query:  LFSKRIRYQVRKLNAEKRPRMKVTF
        LFSK+IRY+VRKLNAEKRPRMK  F
Subjt:  LFSKRIRYQVRKLNAEKRPRMKVTF

AT4G25990.1 CCT motif family protein1.8e-1138.01Show/hide
Query:  SEVVEKKEEEVTSTAADEWVEKKYINKKK--------NKMEIIGKQKQKQKQLR--LKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPN
        S VV+  + +   TA  +  +KK   KKK           E+     + ++++   LKLDY+G+L AWS K       ESP           FS + L  
Subjt:  SEVVEKKEEEVTSTAADEWVEKKYINKKK--------NKMEIIGKQKQKQKQLR--LKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPN

Query:  RCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTF
             GS+ +  + +  + ++ ++ G + G REASVLRYKEKR++RLFSK+IRYQVRKLNA++RPRMK  F
Subjt:  RCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTF

AT4G25990.2 CCT motif family protein1.0e-1138.46Show/hide
Query:  SEVVEKKEEEVTSTAADEWVEKKYINKKK--------NKMEIIGKQKQKQKQLR--LKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPN
        S VV+  + +   TA  +  +KK   KKK           E+     + ++++   LKLDY+G+L AWS K       ESP           FS + L  
Subjt:  SEVVEKKEEEVTSTAADEWVEKKYINKKK--------NKMEIIGKQKQKQKQLR--LKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPN

Query:  RCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKV
             GS+ +  + +  + ++ ++ G + G REASVLRYKEKR++RLFSK+IRYQVRKLNA++RPRMKV
Subjt:  RCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKV

AT5G14370.1 CCT motif family protein1.5e-3440.81Show/hide
Query:  RKIRTKTRRPKFLSLRLELTPPR--NSTPMSPRPKPPALQEQQ--QQQLTLFPLHPENMV---------EDRDSMHDENVALMFNSDVVSSCCSLQSLSF
        RKIRTKT++PKFLSL+LEL      N  P S + K     ++Q  +++    P   +            E  +  +D   A +FNS   S+  S+  L  
Subjt:  RKIRTKTRRPKFLSLRLELTPPR--NSTPMSPRPKPPALQEQQ--QQQLTLFPLHPENMV---------EDRDSMHDENVALMFNSDVVSSCCSLQSLSF

Query:  LP-SYQNDMSSTEEESRNLVGGREAEG--GSWLVRAAMR--SREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQ
        LP S   D+    E +      R+  G   S L+R AMR  + E E   EE+WV YSEVV    EEV S +               +    G     +  
Subjt:  LP-SYQNDMSSTEEESRNLVGGREAEG--GSWLVRAAMR--SREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQ

Query:  LRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEG----WKMGQREASVLRYKEKRQSRLFSK
        L LKLDYE I+ AWSDK  LY++GE PQTVP+LH     S+D             N      N+W VPEME     W+ G REAS+LRYKEKRQ+RLFSK
Subjt:  LRLKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEG----WKMGQREASVLRYKEKRQSRLFSK

Query:  RIRYQVRKLNAEKRPRMKVTF
        RIRYQVRKLNAEKRPR+K  F
Subjt:  RIRYQVRKLNAEKRPRMKVTF

AT5G57180.1 chloroplast import apparatus 28.0e-1233.78Show/hide
Query:  REAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEK--------KEEEVTSTAADEWVEKKYI---------NKKKNKMEIIGKQKQKQKQLR-------
        R + G ++ +   +RS  RE  + + W  ++   E+        K E   ST  +E  + K +          KKK KM +      + K L        
Subjt:  REAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEK--------KEEEVTSTAADEWVEKKYI---------NKKKNKMEIIGKQKQKQKQLR-------

Query:  ------LKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLP--NRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLF
              LKLDY+G+L AWSDK        SP        D+I  S+++    R   +   G+S                  G REASVLRYKEKR++RLF
Subjt:  ------LKLDYEGILNAWSDKAPLYINGESPQTVPNLHDDQIFSSDSLP--NRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLF

Query:  SKRIRYQVRKLNAEKRPRMKVT
        SK+IRYQVRKLNA++RPRMKV+
Subjt:  SKRIRYQVRKLNAEKRPRMKVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACCAACAATTCCGTAATCAAACACCCAATTCGTAAAATCAGAACCAAAACCAGACGACCCAAGTTCCTCAGCCTCCGATTGGAGCTGACACCGCCGCGGAATTCCACTCC
GATGAGCCCCAGGCCGAAGCCGCCGGCGTTGCAGGAGCAGCAGCAGCAGCAGCTGACTCTGTTTCCTCTGCATCCGGAAAACATGGTGGAGGACAGAGACTCGATGCACG
ACGAGAACGTGGCGCTGATGTTCAACAGCGACGTGGTGAGCAGCTGCTGCAGCCTGCAGAGCTTGAGCTTCCTGCCGAGTTACCAGAACGACATGTCGTCGACGGAGGAG
GAGTCGCGTAATTTGGTGGGTGGGAGGGAGGCGGAGGGCGGGAGCTGGCTGGTGCGGGCGGCGATGAGGAGCCGGGAGAGGGAGGCGGCGGAGGAGGAGAAGTGGGTGTG
TTACTCGGAGGTGGTGGAGAAGAAGGAGGAGGAAGTTACGAGCACGGCGGCGGATGAGTGGGTGGAGAAGAAGTACATCAACAAAAAGAAGAACAAAATGGAGATTATTG
GGAAACAGAAACAGAAACAGAAACAGCTGCGGTTGAAGCTTGATTACGAGGGGATTTTGAATGCTTGGTCTGATAAAGCTCCGCTTTATATCAATGGAGAATCTCCTCAG
ACCGTCCCTAATCTCCATGATGATCAAATCTTCAGCTCTGATTCCCTTCCCAATAGATGCTGTGGAATGGGAAGTGAAGGGAATAGTAATAATAATAATAATAATGTGTG
GAAAGTGCCAGAGATGGAAGGGTGGAAAATGGGGCAAAGAGAGGCAAGTGTTTTGAGATACAAAGAGAAAAGGCAAAGTAGGCTCTTCTCAAAGCGCATTCGTTATCAAG
TTAGAAAACTCAATGCTGAGAAGCGTCCAAGAATGAAGGTAACTTTTAACTATCTTCTC
mRNA sequenceShow/hide mRNA sequence
ACCAACAATTCCGTAATCAAACACCCAATTCGTAAAATCAGAACCAAAACCAGACGACCCAAGTTCCTCAGCCTCCGATTGGAGCTGACACCGCCGCGGAATTCCACTCC
GATGAGCCCCAGGCCGAAGCCGCCGGCGTTGCAGGAGCAGCAGCAGCAGCAGCTGACTCTGTTTCCTCTGCATCCGGAAAACATGGTGGAGGACAGAGACTCGATGCACG
ACGAGAACGTGGCGCTGATGTTCAACAGCGACGTGGTGAGCAGCTGCTGCAGCCTGCAGAGCTTGAGCTTCCTGCCGAGTTACCAGAACGACATGTCGTCGACGGAGGAG
GAGTCGCGTAATTTGGTGGGTGGGAGGGAGGCGGAGGGCGGGAGCTGGCTGGTGCGGGCGGCGATGAGGAGCCGGGAGAGGGAGGCGGCGGAGGAGGAGAAGTGGGTGTG
TTACTCGGAGGTGGTGGAGAAGAAGGAGGAGGAAGTTACGAGCACGGCGGCGGATGAGTGGGTGGAGAAGAAGTACATCAACAAAAAGAAGAACAAAATGGAGATTATTG
GGAAACAGAAACAGAAACAGAAACAGCTGCGGTTGAAGCTTGATTACGAGGGGATTTTGAATGCTTGGTCTGATAAAGCTCCGCTTTATATCAATGGAGAATCTCCTCAG
ACCGTCCCTAATCTCCATGATGATCAAATCTTCAGCTCTGATTCCCTTCCCAATAGATGCTGTGGAATGGGAAGTGAAGGGAATAGTAATAATAATAATAATAATGTGTG
GAAAGTGCCAGAGATGGAAGGGTGGAAAATGGGGCAAAGAGAGGCAAGTGTTTTGAGATACAAAGAGAAAAGGCAAAGTAGGCTCTTCTCAAAGCGCATTCGTTATCAAG
TTAGAAAACTCAATGCTGAGAAGCGTCCAAGAATGAAGGTAACTTTTAACTATCTTCTC
Protein sequenceShow/hide protein sequence
TNNSVIKHPIRKIRTKTRRPKFLSLRLELTPPRNSTPMSPRPKPPALQEQQQQQLTLFPLHPENMVEDRDSMHDENVALMFNSDVVSSCCSLQSLSFLPSYQNDMSSTEE
ESRNLVGGREAEGGSWLVRAAMRSREREAAEEEKWVCYSEVVEKKEEEVTSTAADEWVEKKYINKKKNKMEIIGKQKQKQKQLRLKLDYEGILNAWSDKAPLYINGESPQ
TVPNLHDDQIFSSDSLPNRCCGMGSEGNSNNNNNNVWKVPEMEGWKMGQREASVLRYKEKRQSRLFSKRIRYQVRKLNAEKRPRMKVTFNYLL