; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003102 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003102
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpre-rRNA-processing protein ESF2
Genome locationscaffold234:422937..424958
RNA-Seq ExpressionMS003102
SyntenyMS003102
Gene Ontology termsGO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000472 - endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000480 - endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0034462 - small-subunit processome assembly (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034353 - ABT1/ESF2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily
IPR039119 - ABT1/Esf2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134500.1 pre-rRNA-processing protein ESF2 [Momordica charantia]3.0e-19698.93Show/hide
Query:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE
        MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKK KKSAKQCVEENSIKAEAGEIESKAESSMKE
Subjt:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE

Query:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRI
        G PFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRI
Subjt:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRI

Query:  YLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE
        YLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE
Subjt:  YLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE

Query:  RDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV
        RDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVV QKLPKLIRNFPQTQPVADSAVENKQRLSKNILA V
Subjt:  RDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV

XP_022922239.1 pre-rRNA-processing protein ESF2 [Cucurbita moschata]1.9e-15080.85Show/hide
Query:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE
        MPKEE  EV LTTD SPESSKK  K SK KKKQLL EGVDVM+     S ++ ESNINS+   VK KKKRKKS  QCV ENSI+AEAGE E KAE S+KE
Subjt:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE

Query:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR
        G P SDGG EK+   E++Q  LE+ E+ RADSIVRE SGEKILESNNGK+DQR IKRKKRLLKE A A+M GICYLSRVPPHMDPLKLRQILS YGEIQR
Subjt:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR

Query:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAANQV+RKRAGGFRGQ FSEGWVEFTDKRVAKKVA MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKR
Subjt:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV
        ERDFYLSKVDKSRAL SIEERLKKKQKLREDSEM+SE   +QKLPKLIRNFPQTQPVADSAV++K +LS N LA V
Subjt:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV

XP_022990094.1 pre-rRNA-processing protein ESF2 [Cucurbita maxima]3.3e-15080.59Show/hide
Query:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE
        MPKEE  EV+LTTD SPESSKK  K SK KKKQLL EGVDVM+     SV++ ESNINS+   VK KKKR+KS KQCV ENSI+AEAGE E KAE S+KE
Subjt:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE

Query:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR
        G P SDGG EK+   E++Q  LE  E+  ADSIVRE SGEKILESNNGK+DQR IKRKKRLLKE A A+M GICYLSRVPPHMDPLKLRQILS YGEIQR
Subjt:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR

Query:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAANQV+RKRAGGFRGQ FSEGWVEFTDKRVAKKVA MLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKR
Subjt:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV
        ERDFYLSKVDKSRAL SIEERLKKKQKLREDSEM+SE   +QKLPKLIRNFPQTQPVADSAV++K +LS N LA V
Subjt:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV

XP_023529204.1 pre-rRNA-processing protein ESF2 isoform X2 [Cucurbita pepo subsp. pepo]9.6e-15080.32Show/hide
Query:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE
        MPKEE  EVNLTTD SPESSKK  K SK KKKQLL EGVDVM+     SV++ ESNINS+   VK KKKRKKS KQCV ENSI+AEAGE E KAE S+KE
Subjt:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE

Query:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR
        G P SDGG EK+   E++Q   E  E+ RADSIVRE SGEKILESNNGK+DQR +KRKKRLLKE A A+M GICYLSRVPPHMDPLKLRQILS YGEIQR
Subjt:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR

Query:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAANQV+RKRAGGFRGQ FSEGWVEFTDKRVAKKVA  LNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKR
Subjt:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV
        ERDFYLSKVDKSRAL SIEERLKKKQ LREDSEM+SE   +QKLPKLIRNFPQTQPVA+SAV++K +LS N LA V
Subjt:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV

XP_038891142.1 pre-rRNA-processing protein ESF2 [Benincasa hispida]3.1e-15681.65Show/hide
Query:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE
        M KEE  EV+LTTD SP+SSKKRAKR KNK KQLL E  D+M+MKEV SVQ+ ESNIN D DKVKKKKKRKKS +QCVEE+S+K EAGE E++AE+ MKE
Subjt:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE

Query:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR
        G  FS+GG EK   FEK++I LE AE+ R+ SIVRENSGEKILESNNGK+DQR IKRKKRLLKE+  A+M GICYLSRVPPHMDPLKLRQILS YGEIQR
Subjt:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR

Query:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAA+QVQRKR+GGFRGQ FSEGWVEFTDKRVAKKVA +LNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
Subjt:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV
        ERDFYL+KVDKSRALNSIEERLKKKQKLREDSEM S    +QKLPKLIR+FPQTQPVADS V+NKQRLS N+LA V
Subjt:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV

TrEMBL top hitse value%identityAlignment
A0A0A0KUC2 RRM domain-containing protein3.1e-14677.25Show/hide
Query:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKV---KKKKKRKKSAKQCVEENSIKAEAGEIESKAESS
        M  EE  EVNL TD SPES KKRAK  KNK+KQLL +GVDVM+MK+V SVQ+ ESN+N+D DKV   KKKKKRKKS +Q VEE+ IK EAGE E++AE+ 
Subjt:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKV---KKKKKRKKSAKQCVEENSIKAEAGEIESKAESS

Query:  MKEGDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEI
        MKE  P S+ G E    FEK++I LE AE+ R DSI+RENS  KILES+NGK+ ++IKRKK+LLKE+A A+M GICYLSRVPPHMDPLKLRQILS +GEI
Subjt:  MKEGDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEI

Query:  QRIYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAA
        QRIYLAPEDAA+QVQRKRAGGFRGQ FSEGWVEFTDKRVAK+VA MLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAA
Subjt:  QRIYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAA

Query:  KRERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV
        KRERDFYL+KVDKSRALNSIEERLKKKQK+REDSEM+S    +QKLPKLIR+FPQTQPVAD AV+NK RLS N+LA V
Subjt:  KRERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV

A0A1S4E282 pre-rRNA-processing protein ESF26.1e-15079.79Show/hide
Query:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE
        M KEE  EVNLTTD +PESSKKRAK  KNKKKQLL +GVDVM+MK+VRSVQ+ ESNINSD DKVKKKKKRKKS +Q +EE+SIK EAGE E++ E+ MKE
Subjt:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE

Query:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR
          P S+ G E    FEK+ I LE AE+ R D+I+RE S  KILES+NGK D+R IKRKK+LLKE+A A+M GICYLSRVPPHMDPL+LRQILS YGEIQR
Subjt:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR

Query:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAA+QVQRKRAGGFRGQ FSEGWVEFTDKRVAKKVA MLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
Subjt:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV
        ERD YL+KVDKSRALNSIEERLKKKQKLREDSEM+S    +QKLPKLIR+FPQTQPVAD AV+NKQRLS N+LARV
Subjt:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV

A0A6J1BYG4 pre-rRNA-processing protein ESF21.5e-19698.93Show/hide
Query:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE
        MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKK KKSAKQCVEENSIKAEAGEIESKAESSMKE
Subjt:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE

Query:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRI
        G PFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRI
Subjt:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRI

Query:  YLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE
        YLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE
Subjt:  YLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRE

Query:  RDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV
        RDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVV QKLPKLIRNFPQTQPVADSAVENKQRLSKNILA V
Subjt:  RDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV

A0A6J1E2Q1 pre-rRNA-processing protein ESF29.4e-15180.85Show/hide
Query:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE
        MPKEE  EV LTTD SPESSKK  K SK KKKQLL EGVDVM+     S ++ ESNINS+   VK KKKRKKS  QCV ENSI+AEAGE E KAE S+KE
Subjt:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE

Query:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR
        G P SDGG EK+   E++Q  LE+ E+ RADSIVRE SGEKILESNNGK+DQR IKRKKRLLKE A A+M GICYLSRVPPHMDPLKLRQILS YGEIQR
Subjt:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR

Query:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAANQV+RKRAGGFRGQ FSEGWVEFTDKRVAKKVA MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKR
Subjt:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV
        ERDFYLSKVDKSRAL SIEERLKKKQKLREDSEM+SE   +QKLPKLIRNFPQTQPVADSAV++K +LS N LA V
Subjt:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV

A0A6J1JP68 pre-rRNA-processing protein ESF21.6e-15080.59Show/hide
Query:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE
        MPKEE  EV+LTTD SPESSKK  K SK KKKQLL EGVDVM+     SV++ ESNINS+   VK KKKR+KS KQCV ENSI+AEAGE E KAE S+KE
Subjt:  MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKE

Query:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR
        G P SDGG EK+   E++Q  LE  E+  ADSIVRE SGEKILESNNGK+DQR IKRKKRLLKE A A+M GICYLSRVPPHMDPLKLRQILS YGEIQR
Subjt:  GDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQR-IKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQR

Query:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR
        IYLAPEDAANQV+RKRAGGFRGQ FSEGWVEFTDKRVAKKVA MLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQK+ALEISAAKR
Subjt:  IYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR

Query:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV
        ERDFYLSKVDKSRAL SIEERLKKKQKLREDSEM+SE   +QKLPKLIRNFPQTQPVADSAV++K +LS N LA V
Subjt:  ERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV

SwissProt top hitse value%identityAlignment
Q4HZ47 Pre-rRNA-processing protein ESF23.0e-3734.55Show/hide
Query:  EENSIKAEAGEIESKAESSMKEGDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRV
        E++  K   G    K ES   E DP SD G + +    +K       ED + D   +     K   S       R   KK L+   A     G+ YLSR+
Subjt:  EENSIKAEAGEIESKAESSMKEGDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRV

Query:  PPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEE
        PP M P KLR +L  YG I RI+LAPED A+  +R RAGG + + ++EGWVEFT K+ AK V  +LN   IGG+K S ++ DLWN+ YL  FKW +LTE+
Subjt:  PPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEE

Query:  TAYKHAIREQKLALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARVSDK
         A ++A R  ++  EIS + +E   ++  V+K++ L+ +  + K K++    +E  +E   ++ + ++ R+F Q  P+A   ++ + + ++  + RV  K
Subjt:  TAYKHAIREQKLALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARVSDK

Query:  L
        +
Subjt:  L

Q59YL9 Pre-rRNA-processing protein ESF21.3e-3535Show/hide
Query:  KKSAKQCVEENSIKAEAGEIESKAES----SMKEGDPFSDGGGEKDAAFE-----KKQIPLEHAEDARADSIVRENSGE------KILESNNGKSDQRIK
        ++S  +  +EN+ + +   ++SK  S    +  + + FS+   +KD   E     K +    + ED   D    EN G+       +      K ++++K
Subjt:  KKSAKQCVEENSIKAEAGEIESKAES----SMKEGDPFSDGGGEKDAAFE-----KKQIPLEHAEDARADSIVRENSGE------KILESNNGKSDQRIK

Query:  R--KKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRK
        +   K L KE  +    G+CYLSRVPP+M P KLR +LS +GEI R++L PED +   +R + GG + + F+EGW+EF +K  AK  A  LNG ++GG+K
Subjt:  R--KKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRK

Query:  RSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQKLREDSEM
         S +Y D+ NIKYL  FKW DLT++ A ++ +R+ KLA+EIS  ++    ++S V+KS+ + +I+    KK+K  +D  +
Subjt:  RSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQKLREDSEM

Q6BSS5 Pre-rRNA-processing protein ESF21.5e-3636.09Show/hide
Query:  NGKSDQRIKRKK----RLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVAT
        N K  + I  KK    +L KE  K    G+CYLS++PP+M P KLR +LS +G+I R++L PED +   +R + GG + + ++ GWVEF +K+ AK  A 
Subjt:  NGKSDQRIKRKK----RLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVAT

Query:  MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQ-KLREDSEMSSEPVVNQ
         LNG ++GG+K S +Y D+ NIKYLS FKW DLT++ A ++ IR+ KL++E+S  ++    +++ V+KS+ +N+++ + K +Q +   D+    E  + +
Subjt:  MLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQ-KLREDSEMSSEPVVNQ

Query:  KLPKLIRNFPQTQPVADSAVENKQRLSKNI
         L +  R    T+  A+  +++K + ++ +
Subjt:  KLPKLIRNFPQTQPVADSAVENKQRLSKNI

Q6CFT1 Pre-rRNA-processing protein ESF21.3e-3535.94Show/hide
Query:  ESKAESSMKEGDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQI
        E K  +S K+   F +  G+ D   +++       ED   +    E   +K +++++ K+  +   K+ + K + K    G+ Y SR+PP MDP KLR +
Subjt:  ESKAESSMKEGDPFSDGGGEKDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQI

Query:  LSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKL
        L  +G + RIYL PED   Q  R R GG R   ++EGW EFT KR AK  A+ LNG  IGG+K S  Y D+ N KYL KFKW DL+E+ A +   R+ +L
Subjt:  LSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKL

Query:  ALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNI
          EIS A RE   Y+  ++KS+A     ER +++Q+  E  E   +P       K+ R+F Q +  +  A E K+ L  ++
Subjt:  ALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNI

Q75DA3 Pre-rRNA-processing protein ESF22.8e-3538.33Show/hide
Query:  EKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKAN-MCGICYLSRVPPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRK
        E K    E    A  D+I  +++ E   E    +  Q   R+ + LK S K+N   G+ YLS++PP+M P K+RQILS +G++ R++L  ED  +  QR 
Subjt:  EKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKAN-MCGICYLSRVPPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRK

Query:  RAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLSKVDKSRAL
        + GG +  +F EGW EF  K+ AK  A  LNG  IGG+K + ++ D+ N+KYLS FKW DLTE+ A ++ +R+ KL LEIS A +    ++  V+KS+ L
Subjt:  RAGGFRGQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLSKVDKSRAL

Query:  NSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQ
        N+I  +  K +   E +E S  PV  +K+     + P++Q
Subjt:  NSIEERLKKKQKLREDSEMSSEPVVNQKLPKLIRNFPQTQ

Arabidopsis top hitse value%identityAlignment
AT3G56510.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-7257.66Show/hide
Query:  DSIVRENSGEKILESNNGKSDQRIKR-KKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWV
        D I  E   ++ ++S   K+D++ K+ K++LLKE++KA+  G+CYLSR+PPHMD ++LR IL+ YGE+ RIYLAPED+  QV RKRAGGFRGQ FSEGWV
Subjt:  DSIVRENSGEKILESNNGKSDQRIKR-KKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWV

Query:  EFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQKLRE
        EF  K VAK+VA MLNGEQIGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+DFYLSK++KSRA+  I+ R++KK+K++E
Subjt:  EFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQKLRE

Query:  DSEMSSE--PVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV
        +S  ++E  PV     P+ I  F Q + + +   ++K  LS + LA V
Subjt:  DSEMSSE--PVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV

AT3G56510.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-7257.66Show/hide
Query:  DSIVRENSGEKILESNNGKSDQRIKR-KKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWV
        D I  E   ++ ++S   K+D++ K+ K++LLKE++KA+  G+CYLSR+PPHMD ++LR IL+ YGE+ RIYLAPED+  QV RKRAGGFRGQ FSEGWV
Subjt:  DSIVRENSGEKILESNNGKSDQRIKR-KKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRKRAGGFRGQLFSEGWV

Query:  EFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQKLRE
        EF  K VAK+VA MLNGEQIGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+DFYLSK++KSRA+  I+ R++KK+K++E
Subjt:  EFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQKLRE

Query:  DSEMSSE--PVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV
        +S  ++E  PV     P+ I  F Q + + +   ++K  LS + LA V
Subjt:  DSEMSSE--PVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAGGAGGAGATCTGTGAAGTTAATTTAACGACTGATCTCAGCCCAGAATCTAGTAAGAAAAGAGCAAAAAGAAGTAAAAACAAAAAGAAGCAGTTGTTGACTGA
AGGTGTAGATGTCATGAAAATGAAAGAAGTAAGATCTGTTCAGGTGGAGGAAAGCAACATAAACTCTGATGGTGACAAAGTAAAAAAGAAGAAAAAAAGAAAGAAGAGTG
CTAAACAATGTGTAGAAGAGAACTCTATCAAGGCTGAGGCAGGAGAAATTGAAAGTAAAGCAGAGAGTTCTATGAAAGAGGGTGATCCTTTCTCTGATGGTGGAGGTGAG
AAAGATGCAGCTTTTGAAAAGAAGCAAATTCCACTGGAGCATGCTGAGGATGCGAGGGCAGACAGTATTGTTAGAGAAAACTCTGGAGAGAAGATTCTAGAGTCTAACAA
TGGAAAATCAGATCAAAGGATAAAGAGGAAGAAACGGCTTTTGAAGGAATCTGCAAAAGCAAATATGTGTGGGATTTGTTACTTGAGCCGAGTTCCTCCACATATGGATC
CATTGAAACTTCGACAGATCCTCTCACATTATGGGGAGATACAAAGAATTTATCTTGCACCCGAGGACGCTGCAAATCAAGTACAACGAAAGCGTGCAGGAGGGTTTCGA
GGGCAATTATTTTCAGAAGGATGGGTTGAATTTACTGATAAAAGAGTTGCGAAGAAGGTTGCTACTATGTTAAATGGTGAACAAATAGGAGGAAGGAAGAGGTCATCTTT
CTACTATGATCTCTGGAATATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTTACTGAAGAAACTGCTTACAAGCATGCTATACGGGAGCAGAAACTAGCTTTGGAAA
TTTCTGCCGCTAAGAGGGAGAGGGATTTCTATCTTTCTAAAGTTGATAAATCACGCGCATTGAATTCCATTGAAGAACGGCTGAAGAAGAAGCAGAAGTTGCGAGAAGAT
TCAGAAATGAGTTCTGAACCTGTTGTTAACCAGAAACTTCCAAAACTGATCCGCAACTTCCCACAAACACAACCAGTTGCAGATTCTGCAGTAGAAAACAAACAGAGACT
GTCTAAAAATATCCTGGCTAGGGTAAGTGATAAGTTATCATATGATTTACCTATATTCTGTCTG
mRNA sequenceShow/hide mRNA sequence
ATGCCCAAGGAGGAGATCTGTGAAGTTAATTTAACGACTGATCTCAGCCCAGAATCTAGTAAGAAAAGAGCAAAAAGAAGTAAAAACAAAAAGAAGCAGTTGTTGACTGA
AGGTGTAGATGTCATGAAAATGAAAGAAGTAAGATCTGTTCAGGTGGAGGAAAGCAACATAAACTCTGATGGTGACAAAGTAAAAAAGAAGAAAAAAAGAAAGAAGAGTG
CTAAACAATGTGTAGAAGAGAACTCTATCAAGGCTGAGGCAGGAGAAATTGAAAGTAAAGCAGAGAGTTCTATGAAAGAGGGTGATCCTTTCTCTGATGGTGGAGGTGAG
AAAGATGCAGCTTTTGAAAAGAAGCAAATTCCACTGGAGCATGCTGAGGATGCGAGGGCAGACAGTATTGTTAGAGAAAACTCTGGAGAGAAGATTCTAGAGTCTAACAA
TGGAAAATCAGATCAAAGGATAAAGAGGAAGAAACGGCTTTTGAAGGAATCTGCAAAAGCAAATATGTGTGGGATTTGTTACTTGAGCCGAGTTCCTCCACATATGGATC
CATTGAAACTTCGACAGATCCTCTCACATTATGGGGAGATACAAAGAATTTATCTTGCACCCGAGGACGCTGCAAATCAAGTACAACGAAAGCGTGCAGGAGGGTTTCGA
GGGCAATTATTTTCAGAAGGATGGGTTGAATTTACTGATAAAAGAGTTGCGAAGAAGGTTGCTACTATGTTAAATGGTGAACAAATAGGAGGAAGGAAGAGGTCATCTTT
CTACTATGATCTCTGGAATATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTTACTGAAGAAACTGCTTACAAGCATGCTATACGGGAGCAGAAACTAGCTTTGGAAA
TTTCTGCCGCTAAGAGGGAGAGGGATTTCTATCTTTCTAAAGTTGATAAATCACGCGCATTGAATTCCATTGAAGAACGGCTGAAGAAGAAGCAGAAGTTGCGAGAAGAT
TCAGAAATGAGTTCTGAACCTGTTGTTAACCAGAAACTTCCAAAACTGATCCGCAACTTCCCACAAACACAACCAGTTGCAGATTCTGCAGTAGAAAACAAACAGAGACT
GTCTAAAAATATCCTGGCTAGGGTAAGTGATAAGTTATCATATGATTTACCTATATTCTGTCTG
Protein sequenceShow/hide protein sequence
MPKEEICEVNLTTDLSPESSKKRAKRSKNKKKQLLTEGVDVMKMKEVRSVQVEESNINSDGDKVKKKKKRKKSAKQCVEENSIKAEAGEIESKAESSMKEGDPFSDGGGE
KDAAFEKKQIPLEHAEDARADSIVRENSGEKILESNNGKSDQRIKRKKRLLKESAKANMCGICYLSRVPPHMDPLKLRQILSHYGEIQRIYLAPEDAANQVQRKRAGGFR
GQLFSEGWVEFTDKRVAKKVATMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLSKVDKSRALNSIEERLKKKQKLRED
SEMSSEPVVNQKLPKLIRNFPQTQPVADSAVENKQRLSKNILARVSDKLSYDLPIFCL