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MS003103 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003103
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold234:427600..427992
RNA-Seq ExpressionMS003103
SyntenyMS003103
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022133605.1 uncharacterized protein LOC111006144 [Momordica charantia]1.1e-6098.47Show/hide
Query:  MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLF
        MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIR GIVGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLF
Subjt:  MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLF

Query:  LQVNPSSIKYLNKQCAAFQSFAPKYSLPTYN
        LQVNPSSIKYLNKQCAA QSFAPKYSLPTYN
Subjt:  LQVNPSSIKYLNKQCAAFQSFAPKYSLPTYN

XP_022922294.1 uncharacterized protein LOC111430312 [Cucurbita moschata]2.6e-3570.45Show/hide
Query:  TASAGKFRYRRLRYSDEFEESFGRSRR-RSGIRLGIVG---------RASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFA
        TA  GKFRYRRLRYS+EFEE+FGRSRR  +  R   VG         RASI RRLKKL++PSLRKLLR+KSRLV AMRGSI+KVVKRF++GEAYLGDLFA
Subjt:  TASAGKFRYRRLRYSDEFEESFGRSRR-RSGIRLGIVG---------RASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFA

Query:  GNYLFLQVNPSSIKYLNKQCAAFQSFAPKYSL
        GNYLFLQVNPSSIK      +A Q+FAP YSL
Subjt:  GNYLFLQVNPSSIKYLNKQCAAFQSFAPKYSL

XP_022990096.1 uncharacterized protein LOC111487096 [Cucurbita maxima]1.2e-3570.23Show/hide
Query:  TASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVG---------RASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAG
        TA  GKFRYRRLRYS+EFEE+FGRSRR    R   VG         RASI RRLKKL++PSLRKLLR+KSRLV AM+GSISKVVKRF++GEAYLGDLFAG
Subjt:  TASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVG---------RASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAG

Query:  NYLFLQVNPSSIKYLNKQCAAFQSFAPKYSL
        NYLFLQVNPSSIK      +A  +FAP YSL
Subjt:  NYLFLQVNPSSIKYLNKQCAAFQSFAPKYSL

XP_023551709.1 uncharacterized protein LOC111809563 [Cucurbita pepo subsp. pepo]9.1e-3670.23Show/hide
Query:  TASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVG---------RASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAG
        TA+ GKFRYRRLRYS+EFEE+FGRSR     R   VG         RASI RRLKKL++PSLRKLLR+KSRLV AMRGSI+KVVKRF++GEAYLGDLFAG
Subjt:  TASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVG---------RASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAG

Query:  NYLFLQVNPSSIKYLNKQCAAFQSFAPKYSL
        NYLFLQVNPSSIK      +A Q+FAP YSL
Subjt:  NYLFLQVNPSSIKYLNKQCAAFQSFAPKYSL

XP_038889218.1 uncharacterized protein LOC120079105 [Benincasa hispida]3.2e-3365.69Show/hide
Query:  MAESETASAGKFRYRRLRYSDEFEESFGRSR------RRSGIRLGIVGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLF
        MA+ ETA A KFRYRRL YS+EFEE+FGR R      +RS     I   +SI RRLKKL+IPSLRKLLR+KS+LV AMRGSISK++KRF+DGEAYLGDLF
Subjt:  MAESETASAGKFRYRRLRYSDEFEESFGRSR------RRSGIRLGIVGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLF

Query:  AGNYLFLQVNPSSIKYL-NKQCAAFQSFAPKYSLPTY
        AGNYLFLQVNPSS+K L N      Q+F   YSLP++
Subjt:  AGNYLFLQVNPSSIKYL-NKQCAAFQSFAPKYSLPTY

TrEMBL top hitse value%identityAlignment
A0A0A0KSD1 Uncharacterized protein6.0e-3361.69Show/hide
Query:  MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSG-----------------IRLGIVGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRF
        MA+ ETASAGKFRYRRLRYS+EFEE+FGRSR   G                 +R G     SI RRLKKL+IPSLRKLLR+K RLV AMRGSI+KVVKRF
Subjt:  MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSG-----------------IRLGIVGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRF

Query:  KDGEAYLGDLFAGNYLFLQVNPSSIKYL-----NKQCAAF--QSFAPKYSLPTY
        +DGEAYLGDLFAGNYLFLQVNPSS+K L     ++Q   F  ++F   YSLP++
Subjt:  KDGEAYLGDLFAGNYLFLQVNPSSIKYL-----NKQCAAF--QSFAPKYSLPTY

A0A1S4E272 uncharacterized protein LOC1079916312.3e-3261.74Show/hide
Query:  MAESETASAGKFRYRRLRYSDEFEESFGRSR------------RRSGIRLGI---VGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKD
        MA+ ETASAGKFRYRRLRYS+EFEE+FGRSR            RR   R+ +       SI RRLKKL+IPSLRKL+R+K RLV AMRGSI+KV+KRF+D
Subjt:  MAESETASAGKFRYRRLRYSDEFEESFGRSR------------RRSGIRLGI---VGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKD

Query:  GEAYLGDLFAGNYLFLQVNPSSIKYL--NKQCAAF--QSFAPKYSLPTY
        GEAYLGDLFAGNYLFLQVNPSS+K +  + Q   F  ++F   YSLP +
Subjt:  GEAYLGDLFAGNYLFLQVNPSSIKYL--NKQCAAF--QSFAPKYSLPTY

A0A6J1BVQ8 uncharacterized protein LOC1110061445.2e-6198.47Show/hide
Query:  MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLF
        MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIR GIVGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLF
Subjt:  MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLF

Query:  LQVNPSSIKYLNKQCAAFQSFAPKYSLPTYN
        LQVNPSSIKYLNKQCAA QSFAPKYSLPTYN
Subjt:  LQVNPSSIKYLNKQCAAFQSFAPKYSLPTYN

A0A6J1E2Z5 uncharacterized protein LOC1114303121.3e-3570.45Show/hide
Query:  TASAGKFRYRRLRYSDEFEESFGRSRR-RSGIRLGIVG---------RASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFA
        TA  GKFRYRRLRYS+EFEE+FGRSRR  +  R   VG         RASI RRLKKL++PSLRKLLR+KSRLV AMRGSI+KVVKRF++GEAYLGDLFA
Subjt:  TASAGKFRYRRLRYSDEFEESFGRSRR-RSGIRLGIVG---------RASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFA

Query:  GNYLFLQVNPSSIKYLNKQCAAFQSFAPKYSL
        GNYLFLQVNPSSIK      +A Q+FAP YSL
Subjt:  GNYLFLQVNPSSIKYLNKQCAAFQSFAPKYSL

A0A6J1JM01 uncharacterized protein LOC1114870965.8e-3670.23Show/hide
Query:  TASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVG---------RASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAG
        TA  GKFRYRRLRYS+EFEE+FGRSRR    R   VG         RASI RRLKKL++PSLRKLLR+KSRLV AM+GSISKVVKRF++GEAYLGDLFAG
Subjt:  TASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVG---------RASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAG

Query:  NYLFLQVNPSSIKYLNKQCAAFQSFAPKYSL
        NYLFLQVNPSSIK      +A  +FAP YSL
Subjt:  NYLFLQVNPSSIKYLNKQCAAFQSFAPKYSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G14410.1 unknown protein9.1e-1041.94Show/hide
Query:  YRRLRYSDEFEESFGR-SRRRSGI---RLGIVGRASIRRRLK-KLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSI
        Y+RL   D+    FG  +RRRS     R   V     RRR++ ++KI  LR  +RKK+  VK     I K++KR K+ +++ GDLFAGNYLF+QVNPSS+
Subjt:  YRRLRYSDEFEESFGR-SRRRSGI---RLGIVGRASIRRRLK-KLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSI

Query:  --KYLNKQCAAFQ--SFAPKYSLP
          KY+  +    Q  +F  + SLP
Subjt:  --KYLNKQCAAFQ--SFAPKYSLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGTCCGAAACCGCGTCCGCAGGCAAATTCCGGTACCGGAGGCTGAGATACAGCGACGAATTTGAGGAGTCGTTCGGAAGATCCAGGCGACGATCAGGGATCAG
GTTAGGAATTGTCGGAAGGGCTTCGATTAGGAGGAGGCTGAAGAAGCTCAAAATCCCTAGCCTCAGGAAGCTGCTGAGGAAGAAATCGCGGCTTGTGAAAGCCATGAGAG
GCTCCATTTCGAAGGTCGTCAAGAGATTCAAAGACGGAGAAGCGTATTTGGGAGATCTTTTCGCCGGAAATTATCTGTTCCTTCAAGTTAATCCCAGCTCCATCAAATAC
CTCAATAAGCAATGCGCCGCCTTTCAAAGCTTCGCTCCCAAATATTCTCTCCCAACCTATAAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGTCCGAAACCGCGTCCGCAGGCAAATTCCGGTACCGGAGGCTGAGATACAGCGACGAATTTGAGGAGTCGTTCGGAAGATCCAGGCGACGATCAGGGATCAG
GTTAGGAATTGTCGGAAGGGCTTCGATTAGGAGGAGGCTGAAGAAGCTCAAAATCCCTAGCCTCAGGAAGCTGCTGAGGAAGAAATCGCGGCTTGTGAAAGCCATGAGAG
GCTCCATTTCGAAGGTCGTCAAGAGATTCAAAGACGGAGAAGCGTATTTGGGAGATCTTTTCGCCGGAAATTATCTGTTCCTTCAAGTTAATCCCAGCTCCATCAAATAC
CTCAATAAGCAATGCGCCGCCTTTCAAAGCTTCGCTCCCAAATATTCTCTCCCAACCTATAAT
Protein sequenceShow/hide protein sequence
MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKY
LNKQCAAFQSFAPKYSLPTYN