; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003113 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003113
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal RNA-processing protein 8
Genome locationscaffold234:499498..502167
RNA-Seq ExpressionMS003113
SyntenyMS003113
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0032259 - methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR007823 - Ribosomal RNA processing protein 8
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR042036 - Ribosomal RNA-processing protein 8, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458812.1 PREDICTED: ribosomal RNA-processing protein 8 isoform X1 [Cucumis melo]7.8e-14188.73Show/hide
Query:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF
        MADEGRSS+KRKRAKRRG DKNKD T N+ D    SS +DIVVS SS GKK +RVSGSSSFLDKMRARLSGGHFRM+NEKLYTCTGEEALNYFKED++LF
Subjt:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF

Query:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE
        D+YHTGYQEQM+HWPE PVNLIIKWLKEHDPSFIVADFGCGDARL+KNVKNKVFSFDLVSKDPSVIACDMSNTPLDS+SVDVAVFCLSLMGVNY SYLAE
Subjt:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE

Query:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
        ARRVLKPRGWLLISEVKSRFDPSNGGADP+KFIKAVC+LGFVSALKDFSNKMFILLYFKKKDEK  +GKD+DWP+LKPCLYKRR
Subjt:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR

XP_022134543.1 ribosomal RNA-processing protein 8 isoform X1 [Momordica charantia]2.8e-15999.65Show/hide
Query:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF
        MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKF+RVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF
Subjt:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF

Query:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE
        DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE
Subjt:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE

Query:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
        ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
Subjt:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR

XP_022938486.1 ribosomal RNA-processing protein 8-like [Cucurbita moschata]1.7e-14088.38Show/hide
Query:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF
        MADEGRS++KRKRAKRR  DKNKDFTN+I D   PS  +DIVVS SS GKK  R SGSSSFLDKMRARLSGGHFRM+NEKLYTCTGEEALNYF EDQVLF
Subjt:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF

Query:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE
        DVYHTGYQEQM HWPE PVNLIIKWLKEHDPSFIVADFGCGDARL+KNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNY SYL E
Subjt:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE

Query:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
        ARRVLKPRGWLLISEVKSRFDPSNGGADP +F++AVC+LGFVSALKDFSNKMFILLYFKKKDEKI  GKD+DWP+LKPCLYKRR
Subjt:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR

XP_022993338.1 ribosomal RNA-processing protein 8-like [Cucurbita maxima]3.5e-14189.82Show/hide
Query:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF
        MADEGRS+RKRKRAKRRG DKNK FTN+I D   PS R DIVVS SS GKK  R SGSSSFLDKMRARLSGGHFRM+NEKLYTCTGEEALNYF EDQVLF
Subjt:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF

Query:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE
        DVYHTGYQEQM HWPE PVNLIIKWLKEHDPSFIVADFGCGDARL+KNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNY SYLAE
Subjt:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE

Query:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKD-VDWPELKPCLYKRR
        ARRVLKPRGWLLISEVKSRFDPSNGGADP KF++AVC+LGFVSALKDFSNKMFILLYFKKKDEKI  GKD VDWP+LKPCLYKRR
Subjt:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKD-VDWPELKPCLYKRR

XP_038889651.1 ribosomal RNA-processing protein 8 [Benincasa hispida]2.0e-14189.08Show/hide
Query:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF
        MADEGRSS+KRKRAKRRG +KNKD TNN+ DT  P SR+DIVVS SS GK  ++VSGSSSFLDKMRARLSGGHFRM+NEKLYTCTGEEALNYFKED+VLF
Subjt:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF

Query:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE
        DVYHTGYQEQM+HWPE PVNLIIKWLKEHDPSFIVADFGCGDARL+KNVKNKVFSFDLVSKDPSVIACDMSNTPLDS+SVDVAVFCLSLMGVNY SYLAE
Subjt:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE

Query:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
        ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVC+LGF+SALKDFSNKMFILLYFKKKD+K  +GKD+DWP+LKPCLYKRR
Subjt:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR

TrEMBL top hitse value%identityAlignment
A0A1S3C8U7 Ribosomal RNA-processing protein 83.8e-14188.73Show/hide
Query:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF
        MADEGRSS+KRKRAKRRG DKNKD T N+ D    SS +DIVVS SS GKK +RVSGSSSFLDKMRARLSGGHFRM+NEKLYTCTGEEALNYFKED++LF
Subjt:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF

Query:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE
        D+YHTGYQEQM+HWPE PVNLIIKWLKEHDPSFIVADFGCGDARL+KNVKNKVFSFDLVSKDPSVIACDMSNTPLDS+SVDVAVFCLSLMGVNY SYLAE
Subjt:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE

Query:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
        ARRVLKPRGWLLISEVKSRFDPSNGGADP+KFIKAVC+LGFVSALKDFSNKMFILLYFKKKDEK  +GKD+DWP+LKPCLYKRR
Subjt:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR

A0A5A7T472 Ribosomal RNA-processing protein 83.8e-14188.73Show/hide
Query:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF
        MADEGRSS+KRKRAKRRG DKNKD T N+ D    SS +DIVVS SS GKK +RVSGSSSFLDKMRARLSGGHFRM+NEKLYTCTGEEALNYFKED++LF
Subjt:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF

Query:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE
        D+YHTGYQEQM+HWPE PVNLIIKWLKEHDPSFIVADFGCGDARL+KNVKNKVFSFDLVSKDPSVIACDMSNTPLDS+SVDVAVFCLSLMGVNY SYLAE
Subjt:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE

Query:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
        ARRVLKPRGWLLISEVKSRFDPSNGGADP+KFIKAVC+LGFVSALKDFSNKMFILLYFKKKDEK  +GKD+DWP+LKPCLYKRR
Subjt:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR

A0A6J1C2A0 Ribosomal RNA-processing protein 81.4e-15999.65Show/hide
Query:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF
        MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKF+RVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF
Subjt:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF

Query:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE
        DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE
Subjt:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE

Query:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
        ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
Subjt:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR

A0A6J1FDA4 Ribosomal RNA-processing protein 88.4e-14188.38Show/hide
Query:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF
        MADEGRS++KRKRAKRR  DKNKDFTN+I D   PS  +DIVVS SS GKK  R SGSSSFLDKMRARLSGGHFRM+NEKLYTCTGEEALNYF EDQVLF
Subjt:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF

Query:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE
        DVYHTGYQEQM HWPE PVNLIIKWLKEHDPSFIVADFGCGDARL+KNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNY SYL E
Subjt:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE

Query:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
        ARRVLKPRGWLLISEVKSRFDPSNGGADP +F++AVC+LGFVSALKDFSNKMFILLYFKKKDEKI  GKD+DWP+LKPCLYKRR
Subjt:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR

A0A6J1K1X6 Ribosomal RNA-processing protein 81.7e-14189.82Show/hide
Query:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF
        MADEGRS+RKRKRAKRRG DKNK FTN+I D   PS R DIVVS SS GKK  R SGSSSFLDKMRARLSGGHFRM+NEKLYTCTGEEALNYF EDQVLF
Subjt:  MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLF

Query:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE
        DVYHTGYQEQM HWPE PVNLIIKWLKEHDPSFIVADFGCGDARL+KNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNY SYLAE
Subjt:  DVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAE

Query:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKD-VDWPELKPCLYKRR
        ARRVLKPRGWLLISEVKSRFDPSNGGADP KF++AVC+LGFVSALKDFSNKMFILLYFKKKDEKI  GKD VDWP+LKPCLYKRR
Subjt:  ARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKD-VDWPELKPCLYKRR

SwissProt top hitse value%identityAlignment
O43159 Ribosomal RNA-processing protein 86.6e-5042.14Show/hide
Query:  SRK--RKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLFDVYHT
        SRK  R R K +   KNK     + D A P+         S   +     + + +   +M  RL G  FR +NE+LY+     A   F+ED   F +YH 
Subjt:  SRK--RKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLFDVYHT

Query:  GYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAEARRVL
        G+Q Q+  WP QPV+ I + L++   S +VADFGCGD RLA +++N V  FDL S DP V  CDM+  PL+  SVDVAVFCLSLMG N   +L EA RVL
Subjt:  GYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAEARRVL

Query:  KPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGK-DVDWPELKPCLYKRR
        KP G L ++EV SRF+      D + F++AV  LGF    KD +N  F L  F+K    ++  K  +   +L+PCLYKRR
Subjt:  KPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGK-DVDWPELKPCLYKRR

O44410 Ribosomal RNA-processing protein 86.8e-4738.21Show/hide
Query:  SSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLFDVYHTG
        SS +  + KR+   K K F   +A  A  +   D+  +                 + + + RL  G FR +NEKLYTCTG EA ++FKED   FD+YH G
Subjt:  SSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLFDVYHTG

Query:  YQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNV--KNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAEARRV
        + +Q+  WP  P+  II+WL+       V D GCG+A++A+ V  K+K+ SFDLV+ +  V +CDMS  P + SS D+ ++CLSLMG N   ++ EARRV
Subjt:  YQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNV--KNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAEARRV

Query:  LKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
        LK  G L I+EV SRF         K+F +A+  +GF  + +      F+++ FKK ++  ++ K     +LKPCLYK+R
Subjt:  LKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR

Q5U4F0 Ribosomal RNA-processing protein 85.2e-4740.79Show/hide
Query:  RKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLFDVYHTGYQ
        R R++ KRR ++K +          + S  +  V        +  R   + +   +M  RL G  FR +NE+LY+     A   F+ED   F +YH G+Q
Subjt:  RKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLFDVYHTGYQ

Query:  EQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAEARRVLKPR
         Q+  WP  PV+ I K L++   S +VADFGCGD RLA +V+N V  FDL + DP V  CDM+  PL+  SVDVAVFCLSLMG N   +L EA RVLKP 
Subjt:  EQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAEARRVLKPR

Query:  GWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGK-DVDWPELKPCLYKRR
        G L ++EV SRF+      D + F+ AV  LGF    KD +N  F L  F+K     +  K  +   +L+PCLYK R
Subjt:  GWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGK-DVDWPELKPCLYKRR

Q84JC0 Ribosomal RNA-processing protein 81.7e-9863.76Show/hide
Query:  DEGRSSRKRKRAKRRGEDKNKD-----FTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQ
        +E ++SR RKR ++R    +K+        N  +       K+    GSS   K  +    S+FLD +R RLSGG FRM+NEKLYTC+G+EAL+YFKED 
Subjt:  DEGRSSRKRKRAKRRGEDKNKD-----FTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQ

Query:  VLFDVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESY
         +FD+YHTGYQ+QMS+WPE PVN II WL  +  S +VADFGCGDAR+AK+VKNKVFSFDLVSK+PSVIACDMSNT L+SSSVDVAVFCLSLMG NY SY
Subjt:  VLFDVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESY

Query:  LAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
        + EA RVL+P G LLI+EVKSRFDP+NGGADPK F+KAVCDLGF S LKDFSNKMFIL +FKKK++     K + WPELK CLYKRR
Subjt:  LAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR

Q9DB85 Ribosomal RNA-processing protein 84.0e-4742.14Show/hide
Query:  SRK--RKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLFDVYHT
        SRK  R R K +   KNK       + A P +  +         K   + S + +   +M  RL G  FR +NE+LY+     A   F+ED   F +YH 
Subjt:  SRK--RKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLFDVYHT

Query:  GYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAEARRVL
        G+Q Q+  WP  PV+ I K L++   S +VADFGCGD RLA +V+N V  FDL S DP V  CDM+  PL+  SVDVAVFCLSLMG N   +L EA RVL
Subjt:  GYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAEARRVL

Query:  KPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGK-DVDWPELKPCLYKRR
        K  G L ++EV SRF+      D + F+ AV  LGF    KD +N  F L  F+K     +  K  +   +L+PCLYKRR
Subjt:  KPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGK-DVDWPELKPCLYKRR

Arabidopsis top hitse value%identityAlignment
AT5G40530.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein1.2e-9963.76Show/hide
Query:  DEGRSSRKRKRAKRRGEDKNKD-----FTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQ
        +E ++SR RKR ++R    +K+        N  +       K+    GSS   K  +    S+FLD +R RLSGG FRM+NEKLYTC+G+EAL+YFKED 
Subjt:  DEGRSSRKRKRAKRRGEDKNKD-----FTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQ

Query:  VLFDVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESY
         +FD+YHTGYQ+QMS+WPE PVN II WL  +  S +VADFGCGDAR+AK+VKNKVFSFDLVSK+PSVIACDMSNT L+SSSVDVAVFCLSLMG NY SY
Subjt:  VLFDVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESY

Query:  LAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR
        + EA RVL+P G LLI+EVKSRFDP+NGGADPK F+KAVCDLGF S LKDFSNKMFIL +FKKK++     K + WPELK CLYKRR
Subjt:  LAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR

AT5G40530.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein6.2e-8859.58Show/hide
Query:  DEGRSSRKRKRAKRRGEDKNKD-----FTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQ
        +E ++SR RKR ++R    +K+        N  +       K+    GSS   K  +    S+FLD +R RLSGG FRM+NEKLYTC+G+EAL+YFKED 
Subjt:  DEGRSSRKRKRAKRRGEDKNKD-----FTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQ

Query:  VLFDVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESY
         +FD+YHTGYQ+QMS+WPE PVN II WL  +  S +VADFGCGDAR+AK+VKNKVFSFDLVSK+PSVIACDMSNT L+SSSVDVAVFCLSLMG NY SY
Subjt:  VLFDVYHTGYQEQMSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESY

Query:  LAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALK-----------------------DFSNKMFILLYFKKK
        + EA RVL+P G LLI+EVKSRFDP+NGGADPK F+KAVCDLGF S LK                       DFSNKMFIL +FKKK
Subjt:  LAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLGFVSALK-----------------------DFSNKMFILLYFKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATGAGGGTCGCTCAAGCAGAAAGAGGAAGAGGGCGAAGCGTCGTGGAGAGGACAAAAACAAAGATTTCACGAATAATATTGCGGATACTGCTCGACCTAGTAG
TCGAAAAGACATCGTTGTTTCTGGTTCTTCCGGCGGGAAAAAATTCGAGAGAGTTTCCGGTTCGTCTAGTTTTCTCGATAAGATGCGGGCTCGTTTGTCAGGAGGGCATT
TCAGGATGATTAATGAGAAGCTGTATACCTGCACAGGGGAAGAGGCACTTAATTATTTCAAAGAAGATCAGGTTCTGTTTGATGTGTATCATACAGGATATCAAGAGCAA
ATGTCGCATTGGCCTGAGCAGCCTGTGAATTTAATCATAAAATGGCTGAAAGAGCATGATCCCTCATTTATTGTGGCTGATTTTGGCTGTGGGGACGCACGCCTTGCAAA
GAATGTGAAGAATAAAGTTTTCTCGTTTGATCTGGTTTCCAAAGATCCTTCCGTTATTGCTTGTGATATGTCAAATACACCTCTTGATTCTTCATCTGTGGATGTCGCCG
TCTTTTGCCTTTCACTTATGGGGGTCAATTATGAAAGTTACTTGGCGGAAGCACGGAGAGTACTTAAACCACGTGGATGGCTTTTAATATCAGAAGTCAAAAGCAGATTT
GACCCAAGCAATGGAGGAGCCGACCCCAAAAAGTTCATAAAGGCTGTTTGTGATCTAGGTTTCGTCTCAGCCTTAAAGGACTTCTCAAATAAGATGTTTATCTTGTTATA
CTTCAAGAAAAAGGATGAGAAAATTTTGAAGGGGAAGGATGTCGATTGGCCCGAGCTAAAACCTTGTTTATACAAACGTCGC
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATGAGGGTCGCTCAAGCAGAAAGAGGAAGAGGGCGAAGCGTCGTGGAGAGGACAAAAACAAAGATTTCACGAATAATATTGCGGATACTGCTCGACCTAGTAG
TCGAAAAGACATCGTTGTTTCTGGTTCTTCCGGCGGGAAAAAATTCGAGAGAGTTTCCGGTTCGTCTAGTTTTCTCGATAAGATGCGGGCTCGTTTGTCAGGAGGGCATT
TCAGGATGATTAATGAGAAGCTGTATACCTGCACAGGGGAAGAGGCACTTAATTATTTCAAAGAAGATCAGGTTCTGTTTGATGTGTATCATACAGGATATCAAGAGCAA
ATGTCGCATTGGCCTGAGCAGCCTGTGAATTTAATCATAAAATGGCTGAAAGAGCATGATCCCTCATTTATTGTGGCTGATTTTGGCTGTGGGGACGCACGCCTTGCAAA
GAATGTGAAGAATAAAGTTTTCTCGTTTGATCTGGTTTCCAAAGATCCTTCCGTTATTGCTTGTGATATGTCAAATACACCTCTTGATTCTTCATCTGTGGATGTCGCCG
TCTTTTGCCTTTCACTTATGGGGGTCAATTATGAAAGTTACTTGGCGGAAGCACGGAGAGTACTTAAACCACGTGGATGGCTTTTAATATCAGAAGTCAAAAGCAGATTT
GACCCAAGCAATGGAGGAGCCGACCCCAAAAAGTTCATAAAGGCTGTTTGTGATCTAGGTTTCGTCTCAGCCTTAAAGGACTTCTCAAATAAGATGTTTATCTTGTTATA
CTTCAAGAAAAAGGATGAGAAAATTTTGAAGGGGAAGGATGTCGATTGGCCCGAGCTAAAACCTTGTTTATACAAACGTCGC
Protein sequenceShow/hide protein sequence
MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFERVSGSSSFLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLFDVYHTGYQEQ
MSHWPEQPVNLIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVDVAVFCLSLMGVNYESYLAEARRVLKPRGWLLISEVKSRF
DPSNGGADPKKFIKAVCDLGFVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR