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MS003118 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003118
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR6-like
Genome locationscaffold234:534326..534631
RNA-Seq ExpressionMS003118
SyntenyMS003118
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578666.1 Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3684.11Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE
        MGFSKKSQID   E EGKKWVIAGLPAR+SLKPI TKSRAK G+   DDGEKS STTPTAKEARIPEKLSCP APRKRRSLKSSS  NH REFFNPPDLE
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE

Query:  SVFKLRV
        SVFK+RV
Subjt:  SVFKLRV

KAG7016206.1 Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-3684.11Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE
        MGFSKKSQID   E EGKKWVIAGLPAR+SLKPI TKSRAK G+   DDGEKS STTPTAKEARIPEKLSCP APRKRRSLKSSS  NH REFFNPPDLE
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE

Query:  SVFKLRV
        SVFK+RV
Subjt:  SVFKLRV

XP_022939509.1 cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita moschata]4.6e-3582.24Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE
        MGFSKKSQID   E EGKKWVIAGLPAR+SLKPI TK RAK G+   DDGEKS STTPTAKEARIPEKL CP APRKRRSLKSSS  NH REFFNPPDLE
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE

Query:  SVFKLRV
        SVFK+RV
Subjt:  SVFKLRV

XP_022993176.1 cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita maxima]1.2e-3583.18Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE
        MGFSKKSQID   E+EGKKWVIAGLPAR+SLKPI TKSRAK G+   DD EKS STTPTAKEARIPEKLSCP APRKRRSLKSSS  NH REFFNPPDLE
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE

Query:  SVFKLRV
        SVFK+RV
Subjt:  SVFKLRV

XP_023550994.1 cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita pepo subsp. pepo]8.4e-3785.05Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE
        MGFSKKSQID   E EGKKWVIAGLPAR+SLKPI TKSRAK GD   DDGEKS STTPTAKEARIPEKLSCP APRKRRSLKSSS  NH REFFNPPDLE
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE

Query:  SVFKLRV
        SVFK+RV
Subjt:  SVFKLRV

TrEMBL top hitse value%identityAlignment
A0A0A0KUE2 Uncharacterized protein3.9e-3275.7Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE
        MGFSKKSQID   E E KKWVIAGL AR+SLKPI TKS+ K G+ DGD        TPT KEARIPEKL CPPAPRKRRSLKSSS  NH+REFFNPPDLE
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE

Query:  SVFKLRV
        SVFKLRV
Subjt:  SVFKLRV

A0A5D3BY33 Uncharacterized protein6.7e-3276.64Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE
        MGFSKKSQID   E+E KKWVIAGL AR+SLKPI TKS+ K G+   +DGEK    TPT KEARIPEKL CPPAPRKRRSLKSSS  NH+REFFNPPDLE
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE

Query:  SVFKLRV
        SVFKLRV
Subjt:  SVFKLRV

A0A6J1FHD8 cyclin-dependent protein kinase inhibitor SMR62.2e-3582.24Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE
        MGFSKKSQID   E EGKKWVIAGLPAR+SLKPI TK RAK G+   DDGEKS STTPTAKEARIPEKL CP APRKRRSLKSSS  NH REFFNPPDLE
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE

Query:  SVFKLRV
        SVFK+RV
Subjt:  SVFKLRV

A0A6J1JPL5 cyclin-dependent protein kinase inhibitor SMR6-like2.3e-3275.7Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRS--LKSSSNHVREFFNPPDLE
        MGFS KSQID   E+E KKWVIAG PAR+SLK I TK + K GD   DDGE+SCSTTPTAKEARIPEKLSCPPAPRKRRS  L S+ NHVREFF P DLE
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRS--LKSSSNHVREFFNPPDLE

Query:  SVFKLRV
        SVFKL V
Subjt:  SVFKLRV

A0A6J1JVL3 cyclin-dependent protein kinase inhibitor SMR6-like5.9e-3683.18Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE
        MGFSKKSQID   E+EGKKWVIAGLPAR+SLKPI TKSRAK G+   DD EKS STTPTAKEARIPEKLSCP APRKRRSLKSSS  NH REFFNPPDLE
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSS--NHVREFFNPPDLE

Query:  SVFKLRV
        SVFK+RV
Subjt:  SVFKLRV

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR138.8e-0551.06Show/hide
Query:  TPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVRE--FFNPPDLESVF
        TP AK++RIPE L+CPPAP+K+R  K+     R+  FF PP++E  F
Subjt:  TPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVRE--FFNPPDLESVF

Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR152.1e-1446.3Show/hide
Query:  MGFSKKS--QIDE-----SEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVREFFNPPD
        MGFS K+  Q D      +EGKK VI G+   +++KPI   S A     D    E  C TTPTA   RIP  + CPPAP+KR+     S   REFF+PPD
Subjt:  MGFSKKS--QIDE-----SEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVREFFNPPD

Query:  LESVFKLR
        LE+VF  R
Subjt:  LESVFKLR

Q29Q81 Cyclin-dependent protein kinase inhibitor SMR66.9e-2663.06Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRA-----KHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRR-SLKSSSNHVREFFNP
        MGFSKKSQ +   ES+GKKWVIAG+  RASLKP+KTK RA        + D  + E+ CSTTPTAKE +IPE L CPPAPRKRR +LK  SN VREFF P
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRA-----KHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRR-SLKSSSNHVREFFNP

Query:  P-DLESVFKLR
        P DLE+VF  R
Subjt:  P-DLESVFKLR

Q9LVX6 Cyclin-dependent protein kinase inhibitor SMR73.1e-1044.66Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVR-EFFNPP-DLE
        MG SKKSQ+    +++GKK++ A    RASLKP+KTK      + + +DG      TPTA+ A+ PE   CP APRKR  +    N++R E+F PP D E
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVR-EFFNPP-DLE

Query:  SVF
         VF
Subjt:  SVF

Q9SAD3 Cyclin-dependent protein kinase inhibitor SMR81.1e-1245.79Show/hide
Query:  MGFSKK--SQID-----ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRR-SLKSSSNHV-REFFNP
        MG+S K   Q+D      ++GKKWVIAG+P+R+ LK I         + +  D    C TTPTA   RIP    CP AP+KR+ SLK S   V R++F+P
Subjt:  MGFSKK--SQID-----ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRR-SLKSSSNHV-REFFNP

Query:  PDLESVF
        PDLE+VF
Subjt:  PDLESVF

Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein8.1e-1445.79Show/hide
Query:  MGFSKK--SQID-----ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRR-SLKSSSNHV-REFFNP
        MG+S K   Q+D      ++GKKWVIAG+P+R+ LK I         + +  D    C TTPTA   RIP    CP AP+KR+ SLK S   V R++F+P
Subjt:  MGFSKK--SQID-----ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRR-SLKSSSNHV-REFFNP

Query:  PDLESVF
        PDLE+VF
Subjt:  PDLESVF

AT1G60783.1 unknown protein1.5e-1546.3Show/hide
Query:  MGFSKKS--QIDE-----SEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVREFFNPPD
        MGFS K+  Q D      +EGKK VI G+   +++KPI   S A     D    E  C TTPTA   RIP  + CPPAP+KR+     S   REFF+PPD
Subjt:  MGFSKKS--QIDE-----SEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVREFFNPPD

Query:  LESVFKLR
        LE+VF  R
Subjt:  LESVFKLR

AT3G20898.1 unknown protein6.2e-0651.06Show/hide
Query:  TPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVRE--FFNPPDLESVF
        TP AK++RIPE L+CPPAP+K+R  K+     R+  FF PP++E  F
Subjt:  TPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVRE--FFNPPDLESVF

AT3G27630.1 unknown protein2.2e-1144.66Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVR-EFFNPP-DLE
        MG SKKSQ+    +++GKK++ A    RASLKP+KTK      + + +DG      TPTA+ A+ PE   CP APRKR  +    N++R E+F PP D E
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVR-EFFNPP-DLE

Query:  SVF
         VF
Subjt:  SVF

AT5G40460.1 unknown protein4.9e-2763.06Show/hide
Query:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRA-----KHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRR-SLKSSSNHVREFFNP
        MGFSKKSQ +   ES+GKKWVIAG+  RASLKP+KTK RA        + D  + E+ CSTTPTAKE +IPE L CPPAPRKRR +LK  SN VREFF P
Subjt:  MGFSKKSQID---ESEGKKWVIAGLPARASLKPIKTKSRA-----KHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRR-SLKSSSNHVREFFNP

Query:  P-DLESVFKLR
        P DLE+VF  R
Subjt:  P-DLESVFKLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTCTCGAAGAAGTCCCAAATCGACGAATCGGAGGGGAAAAAATGGGTAATCGCCGGGTTGCCGGCGAGAGCGTCGTTGAAGCCGATAAAGACGAAATCGAGGGC
GAAACACGGCGACGGCGACGGCGACGACGGCGAGAAGTCGTGTTCGACAACGCCGACGGCGAAGGAAGCGAGAATACCGGAGAAACTGAGTTGCCCGCCGGCGCCGAGGA
AGCGCAGATCTCTAAAATCGAGCTCTAATCATGTCAGGGAGTTCTTTAATCCTCCAGATTTAGAATCTGTCTTCAAGCTCCGAGTT
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTCTCGAAGAAGTCCCAAATCGACGAATCGGAGGGGAAAAAATGGGTAATCGCCGGGTTGCCGGCGAGAGCGTCGTTGAAGCCGATAAAGACGAAATCGAGGGC
GAAACACGGCGACGGCGACGGCGACGACGGCGAGAAGTCGTGTTCGACAACGCCGACGGCGAAGGAAGCGAGAATACCGGAGAAACTGAGTTGCCCGCCGGCGCCGAGGA
AGCGCAGATCTCTAAAATCGAGCTCTAATCATGTCAGGGAGTTCTTTAATCCTCCAGATTTAGAATCTGTCTTCAAGCTCCGAGTT
Protein sequenceShow/hide protein sequence
MGFSKKSQIDESEGKKWVIAGLPARASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVREFFNPPDLESVFKLRV