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MS003123 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003123
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold234:562493..562735
RNA-Seq ExpressionMS003123
SyntenyMS003123
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5252773.1 hypothetical protein IMY05_001G0043200 [Salix suchowensis]4.4e-0444.57Show/hide
Query:  LNCRICWCLFVLILIQNFTVSSSFCFRHGQ-----SQRRSIGRRVMVS-MES-----------GRSAIKEPKKAVEQSLRNAPPSGANPIQN
        +NCR    L VLILI   T +SS CF H +      +RR   R+++ + M+S           G   +KE KKAVEQSLR APPS +NPIQN
Subjt:  LNCRICWCLFVLILIQNFTVSSSFCFRHGQ-----SQRRSIGRRVMVS-MES-----------GRSAIKEPKKAVEQSLRNAPPSGANPIQN

ONH95523.1 hypothetical protein PRUPE_7G075600 [Prunus persica]3.9e-0548.78Show/hide
Query:  LFVLILIQNFTVSSSFCFRHGQS-----QRRSIGRRVM----VSMESGR-----SAIKEPKKAVEQSLRNAPPSGANPIQNK
        LF LILI+   + SSFC  H        +RRS+ RR++    VS+   R      A+KEPKKAVE S+R  PPSG+NPIQNK
Subjt:  LFVLILIQNFTVSSSFCFRHGQS-----QRRSIGRRVM----VSMESGR-----SAIKEPKKAVEQSLRNAPPSGANPIQNK

PNS97891.1 hypothetical protein POPTR_016G047700 [Populus trichocarpa]3.3e-0446.51Show/hide
Query:  LNCRICWCLFVLILIQNFTVSSSFCFRHGQ-----SQRRSIGRRVMVS-MES-----GRSAIKEPKKAVEQSLRNAPPSGANPIQN
        +N R    LFVLIL+ +   SSS C  H +     S+R +I R+++ + M+S     G   +KE KKAVEQSLR APPS +NPIQN
Subjt:  LNCRICWCLFVLILIQNFTVSSSFCFRHGQ-----SQRRSIGRRVMVS-MES-----GRSAIKEPKKAVEQSLRNAPPSGANPIQN

TrEMBL top hitse value%identityAlignment
A0A6J5VFA8 Uncharacterized protein1.9e-0548.78Show/hide
Query:  LFVLILIQNFTVSSSFCFRHGQS-----QRRSIGRRVM----VSMESGR-----SAIKEPKKAVEQSLRNAPPSGANPIQNK
        LF LILI+   + SSFC  H        +RRS+ RR++    VS+   R      A+KEPKKAVE S+R  PPSG+NPIQNK
Subjt:  LFVLILIQNFTVSSSFCFRHGQS-----QRRSIGRRVM----VSMESGR-----SAIKEPKKAVEQSLRNAPPSGANPIQNK

M5W792 Uncharacterized protein1.9e-0548.78Show/hide
Query:  LFVLILIQNFTVSSSFCFRHGQS-----QRRSIGRRVM----VSMESGR-----SAIKEPKKAVEQSLRNAPPSGANPIQNK
        LF LILI+   + SSFC  H        +RRS+ RR++    VS+   R      A+KEPKKAVE S+R  PPSG+NPIQNK
Subjt:  LFVLILIQNFTVSSSFCFRHGQS-----QRRSIGRRVM----VSMESGR-----SAIKEPKKAVEQSLRNAPPSGANPIQNK

U5FK75 Uncharacterized protein1.6e-0446.51Show/hide
Query:  LNCRICWCLFVLILIQNFTVSSSFCFRHGQ-----SQRRSIGRRVMVS-MES-----GRSAIKEPKKAVEQSLRNAPPSGANPIQN
        +N R    LFVLIL+ +   SSS C  H +     S+R +I R+++ + M+S     G   +KE KKAVEQSLR APPS +NPIQN
Subjt:  LNCRICWCLFVLILIQNFTVSSSFCFRHGQ-----SQRRSIGRRVMVS-MES-----GRSAIKEPKKAVEQSLRNAPPSGANPIQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAAGGGTTTAAATTGCAGAATTTGTTGGTGCCTTTTTGTTCTGATTCTGATTCAAAATTTCACAGTCAGTTCTTCGTTCTGTTTTCGGCATGGACAGAGCCA
AAGAAGAAGCATAGGAAGAAGGGTAATGGTTTCAATGGAAAGTGGAAGATCCGCCATTAAAGAGCCCAAGAAAGCTGTGGAACAGAGCTTGAGGAACGCGCCGCCCAGTG
GAGCAAATCCAATCCAGAATAAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGAAGGGTTTAAATTGCAGAATTTGTTGGTGCCTTTTTGTTCTGATTCTGATTCAAAATTTCACAGTCAGTTCTTCGTTCTGTTTTCGGCATGGACAGAGCCA
AAGAAGAAGCATAGGAAGAAGGGTAATGGTTTCAATGGAAAGTGGAAGATCCGCCATTAAAGAGCCCAAGAAAGCTGTGGAACAGAGCTTGAGGAACGCGCCGCCCAGTG
GAGCAAATCCAATCCAGAATAAG
Protein sequenceShow/hide protein sequence
MKKKGLNCRICWCLFVLILIQNFTVSSSFCFRHGQSQRRSIGRRVMVSMESGRSAIKEPKKAVEQSLRNAPPSGANPIQNK