CuGenDBv2

Gene ID	MS003138
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	proteasome assembly chaperone 3 isoform X1
Genome location	scaffold234:664189..664909
RNA-Seq Expression	MS003138
Synteny	MS003138
Gene Ontology terms	GO:0043248 - proteasome assembly (biological process)
InterPro domains	IPR018788 - Proteasome assembly chaperone 3

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0042745.1 uncharacterized protein E6C27_scaffold44G002440 [Cucumis melo var. makuwa]

8.1e-37

81.82

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Query:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
        +L  RKEEGM + PTFSVSTVFGKRDEVS L +SSLLLN A  DTWN QPMLVACARQLIEQIS+SGSY+PLLISLGLKDHSVETMKGIV+AV++NRLW
Subjt:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW

KAG7016194.1 hypothetical protein SDJN02_21299 [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-38

85.86

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Query:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
        +L  RKEEGMA+  TFSVSTVFGKRDEVSQLR+SSLLLN A  DTWN QPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETM+GIV+AVSEN+LW
Subjt:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW

XP_022133617.1 proteasome assembly chaperone 3 isoform X1 [Momordica charantia]

1.2e-27

74.75

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Query:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
        +L  RKEEGMAMQPTFSVSTVFGKRDE                      PMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
Subjt:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW

XP_022990970.1 uncharacterized protein LOC111487705 isoform X1 [Cucurbita maxima]

3.2e-25

68.69

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Query:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
        +L  RKEEGMA+ PTFSVSTVFGKR+E                      PML+ACARQLIEQISLSGSYKPLLISLGLKDHSVETM+GI+SAVSENRLW
Subjt:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW

XP_022990973.1 uncharacterized protein LOC111487705 isoform X3 [Cucurbita maxima]

3.2e-25

68.69

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Query:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
        +L  RKEEGMA+ PTFSVSTVFGKR+E                      PML+ACARQLIEQISLSGSYKPLLISLGLKDHSVETM+GI+SAVSENRLW
Subjt:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TMV9 Uncharacterized protein

3.9e-37

81.82

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Query:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
        +L  RKEEGM + PTFSVSTVFGKRDEVS L +SSLLLN A  DTWN QPMLVACARQLIEQIS+SGSY+PLLISLGLKDHSVETMKGIV+AV++NRLW
Subjt:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW

A0A6J1BX71 proteasome assembly chaperone 3 isoform X1

5.7e-28

74.75

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Query:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
        +L  RKEEGMAMQPTFSVSTVFGKRDE                      PMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
Subjt:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW

A0A6J1JPF5 uncharacterized protein LOC111487705 isoform X1

1.6e-25

68.69

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Query:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
        +L  RKEEGMA+ PTFSVSTVFGKR+E                      PML+ACARQLIEQISLSGSYKPLLISLGLKDHSVETM+GI+SAVSENRLW
Subjt:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW

A0A6J1JTH5 uncharacterized protein LOC111487705 isoform X3

1.6e-25

68.69

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Query:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
        +L  RKEEGMA+ PTFSVSTVFGKR+E                      PML+ACARQLIEQISLSGSYKPLLISLGLKDHSVETM+GI+SAVSENRLW
Subjt:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW

A0A6J1JTJ3 uncharacterized protein LOC111489603 isoform X1

5.9e-25

68.69

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Query:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
        +L  RKEEGMA+  TFSVSTVFGKRDE                      PMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETM+GIV+AVSEN+LW
Subjt:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G14710.1 CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

2.8e-19

52.53

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Query:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW
        +L  RKEEGM+++PTFSVS +FGKRDE                      PML A AR+LIE IS     KPL++SLGLKDHS ET+K IV+ V ENRLW
Subjt:  VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW

Sequences

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CDS sequence

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GTTTTAATTCCCAGGAAGGAGGAAGGGATGGCAATGCAGCCAACCTTCTCAGTTTCGACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTGCGTTTTAGTAGTTTGTT
ACTGAATACTGCTGTGACTGATACATGGAATATGCAGCCGATGCTGGTCGCATGTGCCCGCCAGTTGATCGAACAAATCAGTTTGTCAGGTTCCTACAAGCCATTACTAA
TCTCTCTTGGCCTCAAAGACCATTCTGTGGAGACGATGAAAGGCATTGTTTCTGCTGTGTCTGAGAATCGACTTTGG

mRNA sequence

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Protein sequence

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VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW

MS003138 (gene) of Bitter gourd (TR) v1 genome