; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003154 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003154
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNHL domain protein
Genome locationscaffold234:772557..773024
RNA-Seq ExpressionMS003154
SyntenyMS003154
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602448.1 hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sororia]1.8e-6276.47Show/hide
Query:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY
        SQSPDLSSD NGFH  D LHE+AFASR CC WLPCLRSNPS++   WWERIR +++DD+WWLRGW+R R+WSEIVAGPKWKTFIRQF+K+ R+RQST+RY
Subjt:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY

Query:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
        DPLSY+LNFDEGP  DDPF ED  RRDFS RFA++P+SAKSSMDLGKDG SFI
Subjt:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI

XP_022134303.1 uncharacterized protein LOC111006597 [Momordica charantia]9.3e-8899.36Show/hide
Query:  VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQST
        VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIR WSEIVAGPKWKTFIRQFNKSPRNRQST
Subjt:  VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQST

Query:  FRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
        FRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
Subjt:  FRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI

XP_022990588.1 uncharacterized protein LOC111487422 [Cucurbita maxima]5.2e-6275.82Show/hide
Query:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY
        SQSPDLSSD NGFH  D LHE+AFASR CC WLPCLRSNPS+    WWERIR +++DD+WWLRGW+R R+WSEIVAGPKWKTFIRQF+K+ R+RQST+RY
Subjt:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY

Query:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
        DPLSY+LNFD+GP  DDPF ED  RRDFS RFA++P+SAKSSMDLGKDG SFI
Subjt:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI

XP_031741765.1 uncharacterized protein LOC116403956 [Cucumis sativus]2.1e-6376.47Show/hide
Query:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY
        + SPDLSSDENGF H DDLH++ FA+R CCLW+PCLRSN SQ+   WWERIR +++DD+WWL+GW+R REWSEIVAGPKWKTFIRQF+K+ RNRQSTFRY
Subjt:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY

Query:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
        DPLSYSLNFDEGP  DDPF +D  RRDFSTRFAA+P+SAKSSMDLGKD  SFI
Subjt:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI

XP_038889212.1 uncharacterized protein LOC120079097 [Benincasa hispida]1.1e-6479.08Show/hide
Query:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY
        +QSPDLSSDEN F H DDLH++AF SR CCLWLPCLRSNPSQ+   WWERIR +++DD+WWLRGW+R REWSEI+AGPKWKTFIRQFNK+ RNRQSTFRY
Subjt:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY

Query:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
        DPLSYSLNFDEGP  DDPF +D  RRDFSTRFAA+P+SAKSSMDLGKDG  FI
Subjt:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI

TrEMBL top hitse value%identityAlignment
A0A0A0KRY7 Uncharacterized protein1.0e-6376.47Show/hide
Query:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY
        + SPDLSSDENGF H DDLH++ FA+R CCLW+PCLRSN SQ+   WWERIR +++DD+WWL+GW+R REWSEIVAGPKWKTFIRQF+K+ RNRQSTFRY
Subjt:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY

Query:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
        DPLSYSLNFDEGP  DDPF +D  RRDFSTRFAA+P+SAKSSMDLGKD  SFI
Subjt:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI

A0A1S4E267 uncharacterized protein LOC1079916289.8e-5972.55Show/hide
Query:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY
        +QSPD SSDENGF H++DLH++ FA+  CC W+PCLRSN SQ+   WWERIR +++DD+WWLRGW+R REWSEIVAGPKWKTFIRQF+K+ RNRQSTFRY
Subjt:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY

Query:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
        DPLSYSLNFDEGP  +D F +D  RRDFSTRFAA+P+SAKSSMDL KD  S I
Subjt:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI

A0A6J1C1N0 uncharacterized protein LOC1110065974.5e-8899.36Show/hide
Query:  VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQST
        VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIR WSEIVAGPKWKTFIRQFNKSPRNRQST
Subjt:  VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQST

Query:  FRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
        FRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
Subjt:  FRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI

A0A6J1HFG4 uncharacterized protein LOC1114625572.5e-6276.32Show/hide
Query:  QSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYD
        QSPDLSSD NGFH  D LHE+AFASR CC WLPCLRSNPS++   WWERIR +++DD+WWLRGW+R R+WSEIVAGPKWKTFIRQF+K+ R+RQST+RYD
Subjt:  QSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYD

Query:  PLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
        PLSY+LNFDEGP  DDPF ED  RRDFS RFA++P+SAKSSMDLGKDG SFI
Subjt:  PLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI

A0A6J1JTQ3 uncharacterized protein LOC1114874222.5e-6275.82Show/hide
Query:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY
        SQSPDLSSD NGFH  D LHE+AFASR CC WLPCLRSNPS+    WWERIR +++DD+WWLRGW+R R+WSEIVAGPKWKTFIRQF+K+ R+RQST+RY
Subjt:  SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRY

Query:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
        DPLSY+LNFD+GP  DDPF ED  RRDFS RFA++P+SAKSSMDLGKDG SFI
Subjt:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)2.0e-3244.79Show/hide
Query:  DDLHESAFASRSCCLWLPCLRSN--PSQAGSMWWERIRT---SEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKS---------------------
        DD+HE+ FA R CC  +PCL S+   ++ GS+WW+RI T    E D+ WW+RGWRR+REWSE+VAGP+WKT+IR+F +S                     
Subjt:  DDLHESAFASRSCCLWLPCLRSN--PSQAGSMWWERIRT---SEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKS---------------------

Query:  ---PRNRQSTFRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAA--MPSSAKSSMDLGKD
             + Q  FRYD LSYSLNFD+G  +   F ++   RD+S RFAA  +P S K S+D   D
Subjt:  ---PRNRQSTFRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAA--MPSSAKSSMDLGKD

AT3G48020.1 unknown protein7.3e-2246.02Show/hide
Query:  SMWWERIRTSEHDDD-WWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQ-----STFRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMP-S
        S WW+RI  + H +  WW+R + +IREWSEIVAGP+WKTFIR+FN+ PR  Q       FRYDP+SY+L+F++    DD        R FS R+A++P +
Subjt:  SMWWERIRTSEHDDD-WWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQ-----STFRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMP-S

Query:  SAKSSMDLGKDGL
        S KS   +  D +
Subjt:  SAKSSMDLGKDGL

AT5G14890.1 NHL domain-containing protein4.5e-3248Show/hide
Query:  DDLHESAFASRSCCLWLPCLRSNPSQA--GSMWWERIRT---SEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKS-----------PRNRQSTFRY
        D++HE+ FA R CC  LPCL S+      GS+WW+RIRT    E D+ WW+ GW ++REWSEIVAGPKWKTFIR+F ++            R    +FRY
Subjt:  DDLHESAFASRSCCLWLPCLRSNPSQA--GSMWWERIRT---SEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKS-----------PRNRQSTFRY

Query:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAA--MPSSAKSSMDLGKD
        D  SYSLNFD+G  +   F ++   RD+S RFAA  +P S K S+D   D
Subjt:  DPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAA--MPSSAKSSMDLGKD

AT5G25240.1 unknown protein7.8e-0834.91Show/hide
Query:  ADDLHESA-------FASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFN--KSPRNRQSTFRYDPLSYS
        +DD  E+A       F S S   W      + S+ G   W      E   +W     + ++E SE +AGPKWK FIR F+  +    R   F YD  +YS
Subjt:  ADDLHESA-------FASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFN--KSPRNRQSTFRYDPLSYS

Query:  LNFDEG
        LNFD+G
Subjt:  LNFDEG

AT5G62865.1 unknown protein5.6e-2247.97Show/hide
Query:  CCLWLPCLRSNPSQA-GSMWWERIRT-------SEHDDD--WWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPR-----NRQSTFRYDPLSYSLNFDEGP
        CC +    RS  S A G   W RIRT        +H D+  WW+R   +IREWSEIVAGP+WKTFIR+FN+ PR     +    F+YDPLSYSLNFD+  
Subjt:  CCLWLPCLRSNPSQA-GSMWWERIRT-------SEHDDD--WWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPR-----NRQSTFRYDPLSYSLNFDEGP

Query:  VRDDPFYEDHKRRDFSTRFAAMP
          +D +      R FSTRFA++P
Subjt:  VRDDPFYEDHKRRDFSTRFAAMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTCCTCAATCCCAATCCCCCGACCTCTCCTCCGACGAAAATGGCTTCCACCACGCCGACGACCTTCACGAATCGGCCTTCGCCAGCCGCAGCTGCTGCCTCTGGCTCCC
TTGCCTGAGGTCCAATCCCTCGCAGGCCGGCTCCATGTGGTGGGAGCGGATCCGCACCTCCGAGCACGACGACGACTGGTGGCTCAGGGGCTGGAGGAGGATCCGAGAAT
GGTCCGAGATCGTCGCCGGCCCCAAATGGAAGACCTTCATCCGTCAATTCAACAAGAGCCCTCGCAATCGCCAATCCACCTTCCGCTACGACCCTCTCAGCTATTCTCTC
AATTTCGATGAAGGTCCCGTCCGCGACGATCCTTTCTACGAAGACCATAAGCGCCGCGATTTCTCCACTCGCTTTGCTGCCATGCCGTCATCCGCTAAATCCTCCATGGA
CCTCGGCAAGGACGGGCTCTCCTTCATA
mRNA sequenceShow/hide mRNA sequence
GTTCCTCAATCCCAATCCCCCGACCTCTCCTCCGACGAAAATGGCTTCCACCACGCCGACGACCTTCACGAATCGGCCTTCGCCAGCCGCAGCTGCTGCCTCTGGCTCCC
TTGCCTGAGGTCCAATCCCTCGCAGGCCGGCTCCATGTGGTGGGAGCGGATCCGCACCTCCGAGCACGACGACGACTGGTGGCTCAGGGGCTGGAGGAGGATCCGAGAAT
GGTCCGAGATCGTCGCCGGCCCCAAATGGAAGACCTTCATCCGTCAATTCAACAAGAGCCCTCGCAATCGCCAATCCACCTTCCGCTACGACCCTCTCAGCTATTCTCTC
AATTTCGATGAAGGTCCCGTCCGCGACGATCCTTTCTACGAAGACCATAAGCGCCGCGATTTCTCCACTCGCTTTGCTGCCATGCCGTCATCCGCTAAATCCTCCATGGA
CCTCGGCAAGGACGGGCTCTCCTTCATA
Protein sequenceShow/hide protein sequence
VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSL
NFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI