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MS003198 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003198
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS locus-related glycoprotein 1 binding pollen coat
Genome locationscaffold234:1089674..1089892
RNA-Seq ExpressionMS003198
SyntenyMS003198
Gene Ontology termsNA
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042348.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]1.9e-0642.42Show/hide
Query:  ALMMIPQRANA-KQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN
        A++++PQ A A ++C +KLY   C   +C QKC EKH ++S +C+PT      Y  CYCF++C +N
Subjt:  ALMMIPQRANA-KQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN

KGN52439.1 hypothetical protein Csa_009048 [Cucumis sativus]1.7e-0749.21Show/hide
Query:  ALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCA
        A  ++P   +A +C  KLY   C P +C QKC +K+PNSS ECV  P   F+Y  CYCF+DCA
Subjt:  ALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCA

KGN64987.1 hypothetical protein Csa_022748 [Cucumis sativus]4.6e-0542.42Show/hide
Query:  IFTGALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDC
        I   A++ IPQ A A +C + LY   C   +C QKC EKH  +S +C+PT      Y  CYCF+ C
Subjt:  IFTGALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDC

XP_022923678.1 putative defensin-like protein 129 [Cucurbita moschata]2.6e-0841.1Show/hide
Query:  IHLKIFTGALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN
        + L +     +M+P+ A A  C+E+LY   CE   CR++C EK+  S+FECVP P     +  C CFFDC +N
Subjt:  IHLKIFTGALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN

XP_022990690.1 putative defensin-like protein 129 [Cucurbita maxima]1.2e-0842.47Show/hide
Query:  IHLKIFTGALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN
        + L +   A +M+P+ A A  C+E+LY   CE   CR++C EK+  S+FECVP P     +  C CFFDC +N
Subjt:  IHLKIFTGALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN

TrEMBL top hitse value%identityAlignment
A0A0A0KU45 Uncharacterized protein8.2e-0849.21Show/hide
Query:  ALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCA
        A  ++P   +A +C  KLY   C P +C QKC +K+PNSS ECV  P   F+Y  CYCF+DCA
Subjt:  ALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCA

A0A0A0L2R3 Uncharacterized protein2.2e-0544.78Show/hide
Query:  IFTGALMMIPQRANAKQ-CYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDC
        IF  AL++  Q  +A Q C + LY   C   +C +KC EKH   S +C+PT N S     CYCFFDC
Subjt:  IFTGALMMIPQRANAKQ-CYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDC

A0A5A7THQ7 S locus-related glycoprotein 1 binding pollen coat9.1e-0742.42Show/hide
Query:  ALMMIPQRANA-KQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN
        A++++PQ A A ++C +KLY   C   +C QKC EKH ++S +C+PT      Y  CYCF++C +N
Subjt:  ALMMIPQRANA-KQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN

A0A6J1EAA9 putative defensin-like protein 1291.3e-0841.1Show/hide
Query:  IHLKIFTGALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN
        + L +     +M+P+ A A  C+E+LY   CE   CR++C EK+  S+FECVP P     +  C CFFDC +N
Subjt:  IHLKIFTGALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN

A0A6J1JQS7 putative defensin-like protein 1295.7e-0942.47Show/hide
Query:  IHLKIFTGALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN
        + L +   A +M+P+ A A  C+E+LY   CE   CR++C EK+  S+FECVP P     +  C CFFDC +N
Subjt:  IHLKIFTGALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATACATTTAAAAATTTTCACAGGTGCATTGATGATGATTCCTCAAAGAGCCAATGCAAAACAATGTTACGAGAAGTTGTATGGATTTATATGCGAACCTCTTGAATGTCG
TCAAAAATGCAGAGAGAAGCACCCTAATTCATCATTTGAATGCGTTCCAACTCCTAATAGCTCCTTTAATTATAAGCTATGCTATTGCTTCTTTGATTGTGCAAGAAAT
mRNA sequenceShow/hide mRNA sequence
ATACATTTAAAAATTTTCACAGGTGCATTGATGATGATTCCTCAAAGAGCCAATGCAAAACAATGTTACGAGAAGTTGTATGGATTTATATGCGAACCTCTTGAATGTCG
TCAAAAATGCAGAGAGAAGCACCCTAATTCATCATTTGAATGCGTTCCAACTCCTAATAGCTCCTTTAATTATAAGCTATGCTATTGCTTCTTTGATTGTGCAAGAAAT
Protein sequenceShow/hide protein sequence
IHLKIFTGALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN