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MS003207 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003207
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome b559 subunit alpha
Genome locationscaffold234:1173169..1173234
RNA-Seq ExpressionMS003207
SyntenyMS003207
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR013082 - Photosystem II cytochrome b559, alpha subunit, lumenal region


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
P56779 Cytochrome b559 subunit alpha5.5e-0590.91Show/hide
Query:  PNEYFTESRQGIPLIIGYFDSL
        PNEYFTESRQGIPLI G FDSL
Subjt:  PNEYFTESRQGIPLIIGYFDSL
P59702 Cytochrome b559 subunit alpha5.5e-0590.91Show/hide
Query:  PNEYFTESRQGIPLIIGYFDSL
        PNEYFTESRQGIPLI G FDSL
Subjt:  PNEYFTESRQGIPLIIGYFDSL
P69382 Cytochrome b559 subunit alpha5.5e-0590.91Show/hide
Query:  PNEYFTESRQGIPLIIGYFDSL
        PNEYFTESRQGIPLI G FDSL
Subjt:  PNEYFTESRQGIPLIIGYFDSL
Q09MG1 Cytochrome b559 subunit alpha5.5e-0590.91Show/hide
Query:  PNEYFTESRQGIPLIIGYFDSL
        PNEYFTESRQGIPLI G FDSL
Subjt:  PNEYFTESRQGIPLIIGYFDSL
Q70XY9 Cytochrome b559 subunit alpha5.5e-0590.91Show/hide
Query:  PNEYFTESRQGIPLIIGYFDSL
        PNEYFTESRQGIPLI G FDSL
Subjt:  PNEYFTESRQGIPLIIGYFDSL
Arabidopsis top hitse value%identityAlignment
ATCG00580.1 photosystem II reaction center protein E1.5e-0586.36Show/hide
Query:  PNEYFTESRQGIPLIIGYFDSL
        PNEYFTESRQGIPLI G FD L
Subjt:  PNEYFTESRQGIPLIIGYFDSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCAAATGAGTATTTTACAGAGAGCCGACAAGGAATTCCATTAATAATTGGTTATTTTGATTCTTTG
mRNA sequenceShow/hide mRNA sequence
CCAAATGAGTATTTTACAGAGAGCCGACAAGGAATTCCATTAATAATTGGTTATTTTGATTCTTTG
Protein sequenceShow/hide protein sequence
PNEYFTESRQGIPLIIGYFDSL