; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003218 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003218
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L34
Genome locationscaffold234:1288810..1290111
RNA-Seq ExpressionMS003218
SyntenyMS003218
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008195 - Ribosomal protein L34Ae
IPR018065 - Ribosomal protein L34e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KZV29920.1 hypothetical protein F511_17344 [Dorcoceras hygrometricum]9.5e-5698.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL RNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

XP_004138165.3 60S ribosomal protein L34 [Cucumis sativus]2.1e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNR YGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

XP_009591909.1 60S ribosomal protein L34-like [Nicotiana tomentosiformis]2.8e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQ+TKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLASKS

XP_022134504.1 60S ribosomal protein L34-like [Momordica charantia]1.9e-56100Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

XP_038889603.1 60S ribosomal protein L34 [Benincasa hispida]3.6e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNR YGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLASKS

TrEMBL top hitse value%identityAlignment
A0A0A0LK03 Uncharacterized protein1.0e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNR YGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

A0A1S3BV34 60S ribosomal protein L341.0e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNR YGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

A0A2Z7B870 Uncharacterized protein4.6e-5698.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL RNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

A0A5A7UWQ0 60S ribosomal protein L341.0e-5598.33Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNR YGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

A0A6J1BYX4 60S ribosomal protein L34-like9.2e-57100Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLASKS
Subjt:  KIVKKVLKIQKAKEKLASKS

SwissProt top hitse value%identityAlignment
P40590 60S ribosomal protein L348.3e-5591.67Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYR+RHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNR YGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQK KEK A+K+
Subjt:  KIVKKVLKIQKAKEKLASKS

P41098 60S ribosomal protein L348.9e-5795.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNR YGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLKIQKAKEKLA+KS
Subjt:  KIVKKVLKIQKAKEKLASKS

Q42351 60S ribosomal protein L34-18.3e-5590.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNR YGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLK+QKAKEK+A K+
Subjt:  KIVKKVLKIQKAKEKLASKS

Q9FE65 60S ribosomal protein L34-24.1e-5491.6Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNR YGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASK
        KIVKKVLK+QKAKEK+A K
Subjt:  KIVKKVLKIQKAKEKLASK

Q9LJW6 60S ribosomal protein L34-33.5e-5390Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNR YGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLK+QKAKEK A KS
Subjt:  KIVKKVLKIQKAKEKLASKS

Arabidopsis top hitse value%identityAlignment
AT1G26880.1 Ribosomal protein L34e superfamily protein5.9e-5690.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNR YGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLK+QKAKEK+A K+
Subjt:  KIVKKVLKIQKAKEKLASKS

AT1G26880.2 Ribosomal protein L34e superfamily protein1.5e-4390.22Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNR YGGVLSGSAVRER +
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERII

AT1G69620.1 ribosomal protein L342.9e-5591.6Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNR YGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASK
        KIVKKVLK+QKAKEK+A K
Subjt:  KIVKKVLKIQKAKEKLASK

AT3G28900.1 Ribosomal protein L34e superfamily protein2.5e-5490Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNR YGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKEKLASKS
        KIVKKVLK+QKAKEK A KS
Subjt:  KIVKKVLKIQKAKEKLASKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGCGACTTACGTACCGTAAGCGTCACAGCTACGCCACCAAATCCAATCAGCACCGCGTTGTCAAGACGCCTGGGGGGAAGTTGATCTATCAAACCACCAAAAA
GAGGGCCAGCGGTCCCAAATGTCCCGTTACCGGAAAGAGAATCCAAGGGATTCCGCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTTGCTAGGAACCGTAGAACCG
TTAATCGACCATATGGTGGGGTGTTGTCAGGCAGTGCCGTTAGAGAGAGGATTATTCGTGCTTTTCTGGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATCCAA
AAGGCAAAGGAAAAGTTAGCCAGCAAGAGT
mRNA sequenceShow/hide mRNA sequence
ATGGTGCAGCGACTTACGTACCGTAAGCGTCACAGCTACGCCACCAAATCCAATCAGCACCGCGTTGTCAAGACGCCTGGGGGGAAGTTGATCTATCAAACCACCAAAAA
GAGGGCCAGCGGTCCCAAATGTCCCGTTACCGGAAAGAGAATCCAAGGGATTCCGCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTTGCTAGGAACCGTAGAACCG
TTAATCGACCATATGGTGGGGTGTTGTCAGGCAGTGCCGTTAGAGAGAGGATTATTCGTGCTTTTCTGGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATCCAA
AAGGCAAAGGAAAAGTTAGCCAGCAAGAGT
Protein sequenceShow/hide protein sequence
MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRPYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQ
KAKEKLASKS