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MS003245 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003245
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF1997 family protein
Genome locationscaffold234:1527226..1527381
RNA-Seq ExpressionMS003245
SyntenyMS003245
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602512.1 hypothetical protein SDJN03_07745, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1270.59Show/hide
Query:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
        +EEWRIETP+I+ LFLK+ P +DIKIISKTSGE YP  VPH+ITK+L+L+M
Subjt:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
KAG7033185.1 hypothetical protein SDJN02_07239, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-1270.59Show/hide
Query:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
        +EEWRIETP+I+ LFLK+ P +DIKIISKTSGE YP  VPH+ITK+L+L+M
Subjt:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
XP_022134158.1 uncharacterized protein LOC111006493 isoform X1 [Momordica charantia]2.1e-1578.43Show/hide
Query:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
        +EEWRIETP+++LL LK+ PV+D+KIISKTSG+DYPPHVPHHITKLL LEM
Subjt:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
XP_022134159.1 uncharacterized protein LOC111006493 isoform X2 [Momordica charantia]2.1e-1578.43Show/hide
Query:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
        +EEWRIETP+++LL LK+ PV+D+KIISKTSG+DYPPHVPHHITKLL LEM
Subjt:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
XP_023517004.1 uncharacterized protein LOC111780797 isoform X1 [Cucurbita pepo subsp. pepo]2.1e-1270.59Show/hide
Query:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
        +EEWRIETP+I+ LFLK+ P +DIKIISKTSGE YP  VPH+ITK+L+L+M
Subjt:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
TrEMBL top hitse value%identityAlignment
A0A0A0KSD5 Uncharacterized protein2.5e-1169.23Show/hide
Query:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTS-GEDYPPHVPHHITKLLELEM
        +EEWRIETP+IQLLFLK+ P +D+KIISKT+ GE YP HVPH+I KLL  +M
Subjt:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTS-GEDYPPHVPHHITKLLELEM
A0A6J1BY06 uncharacterized protein LOC111006493 isoform X21.0e-1578.43Show/hide
Query:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
        +EEWRIETP+++LL LK+ PV+D+KIISKTSG+DYPPHVPHHITKLL LEM
Subjt:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
A0A6J1C174 uncharacterized protein LOC111006493 isoform X11.0e-1578.43Show/hide
Query:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
        +EEWRIETP+++LL LK+ PV+D+KIISKTSG+DYPPHVPHHITKLL LEM
Subjt:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
A0A6J1HEU2 uncharacterized protein LOC1114623971.0e-1270.59Show/hide
Query:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
        +EEWRIETP+I+ LFLK+ P +DIKIISKTSGE YP  VPH+ITK+L+L+M
Subjt:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
A0A6J1JUJ3 uncharacterized protein LOC1114876272.3e-1268.63Show/hide
Query:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
        +EEWRIETP+I+ LFLK+ P +DIKIISKTSGE YP  VPH+IT++L+L+M
Subjt:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G39520.1 Protein of unknown function (DUF1997)1.4e-0954.9Show/hide
Query:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
        EEEWRI+   I+  FL   PVV ++I  K++G+DYP  VP HITK+LEL M
Subjt:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEM
AT5G39530.1 Protein of unknown function (DUF1997)7.3e-1155.77Show/hide
Query:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEMV
        EEEWRI+   I  LFL + PVVD+++  K++G+DYPP VP  ITK+LEL M+
Subjt:  EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEMV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGAAGAGTGGAGAATTGAAACGCCACAAATCCAGTTGTTGTTTCTCAAGTTATTGCCAGTGGTTGATATAAAAATAATCTCCAAAACCAGTGGTGAGGATTACCCACC
TCATGTTCCTCATCATATCACAAAACTTCTCGAACTTGAAATGGTA
mRNA sequenceShow/hide mRNA sequence
GAGGAAGAGTGGAGAATTGAAACGCCACAAATCCAGTTGTTGTTTCTCAAGTTATTGCCAGTGGTTGATATAAAAATAATCTCCAAAACCAGTGGTGAGGATTACCCACC
TCATGTTCCTCATCATATCACAAAACTTCTCGAACTTGAAATGGTA
Protein sequenceShow/hide protein sequence
EEEWRIETPQIQLLFLKLLPVVDIKIISKTSGEDYPPHVPHHITKLLELEMV