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MS003261 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003261
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMembrane-anchored ubiquitin-fold protein
Genome locationscaffold234:1634379..1635843
RNA-Seq ExpressionMS003261
SyntenyMS003261
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR017000 - Membrane-anchored ubiquitin-fold protein
IPR029071 - Ubiquitin-like domain superfamily
IPR039540 - UBL3-like, ubiquitin domain
IPR040015 - UBL3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141460.1 membrane-anchored ubiquitin-fold protein 2 [Cucumis sativus]5.5e-4797Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAGVGDQLEIKFRLNDGSDIGPKTFPAATS+ATLKESILAQWPR EKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPP+LEK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

XP_008459365.1 PREDICTED: membrane-anchored ubiquitin-fold protein 1-like isoform X1 [Cucumis melo]4.2e-4798Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPR EKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPP+LEK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

XP_008459370.1 PREDICTED: membrane-anchored ubiquitin-fold protein 2-like isoform X2 [Cucumis melo]4.2e-4798Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPR EKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPP+LEK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

XP_022134039.1 membrane-anchored ubiquitin-fold protein 2-like [Momordica charantia]1.9e-4799Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPR EKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

XP_038889784.1 membrane-anchored ubiquitin-fold protein 2-like [Benincasa hispida]1.9e-4799Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPR EKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

TrEMBL top hitse value%identityAlignment
A0A0A0KUE8 Membrane-anchored ubiquitin-fold protein2.7e-4797Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAGVGDQLEIKFRLNDGSDIGPKTFPAATS+ATLKESILAQWPR EKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPP+LEK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

A0A1S3CA36 Membrane-anchored ubiquitin-fold protein2.1e-4798Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPR EKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPP+LEK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

A0A1S3CB88 Membrane-anchored ubiquitin-fold protein2.1e-4798Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPR EKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPP+LEK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

A0A6J1BXN4 Membrane-anchored ubiquitin-fold protein9.2e-4899Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPR EKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

A0A6J1JTE0 Membrane-anchored ubiquitin-fold protein4.6e-4796Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKES+LAQWPR EKENGPRTVKDVK+ISAG+ILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

SwissProt top hitse value%identityAlignment
Q6Z8K4 Membrane-anchored ubiquitin-fold protein 33.3e-2655Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAG  + +E+KFRL DG+DIGP  +  +T+++ LKE ILA+WP+ +KE  P+TV D+KLI+AG+ILENNRTL + R P+ ++PG V TMHVV++PP  +K
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

Q75GT2 Membrane-anchored ubiquitin-fold protein 11.5e-3165.31Show/hide
Query:  GVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        GV +Q EIKFRL DG+DIGPK +PAA+++ATLKESI+AQWP+ +KE GPRTV D+KLI+AGKILENN+TL++C+SP+ D  G +TTMHVV++ P+ +K
Subjt:  GVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

Q8GWJ6 Membrane-anchored ubiquitin-fold protein 61.1e-2653Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAG  D +E+KFRL DG+DIGP  +  + ++++LKE +++QWP+ +KEN P+TV D+KLI+AGKILENNRTL + R P+ ++PG + TMH+V++ P+L+K
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

Q8LCS8 Membrane-anchored ubiquitin-fold protein 23.5e-3673Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MA V DQLEIKFRLNDGSDIGPK FP AT++ATLKE+++AQWPR +KENGP+TVKDVKLISAG+ILENN+T+ DCRSP+ +  G+VTTMHV+IQ    EK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

Q9MAB9 Membrane-anchored ubiquitin-fold protein 13.6e-3366Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MA V +QLEIKFRL DGSDIGPK FP AT+++ LKE+++++WPR EKENGP+TVK+VKLISAGK+LEN++T+ D RSP+ ++ G+VTTMHV+IQ P  EK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

Arabidopsis top hitse value%identityAlignment
AT1G22050.1 membrane-anchored ubiquitin-fold protein 6 precursor8.0e-2853Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MAG  D +E+KFRL DG+DIGP  +  + ++++LKE +++QWP+ +KEN P+TV D+KLI+AGKILENNRTL + R P+ ++PG + TMH+V++ P+L+K
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

AT1G77870.1 membrane-anchored ubiquitin-fold protein 5 precursor5.7e-2654Show/hide
Query:  GVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRS--PLYDIPGSVTTMHVVIQPPSLEK
        G  D +E+KFRL DG+DIGP  +    ++A+LKE I+AQWP+ +KEN P+ + +VKLI+ GKILENN+TL++ RS   + ++PG VTTMHVV++PP  EK
Subjt:  GVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRS--PLYDIPGSVTTMHVVIQPPSLEK

AT3G01050.1 membrane-anchored ubiquitin-fold protein 1 precursor2.6e-3466Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MA V +QLEIKFRL DGSDIGPK FP AT+++ LKE+++++WPR EKENGP+TVK+VKLISAGK+LEN++T+ D RSP+ ++ G+VTTMHV+IQ P  EK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

AT5G15460.1 membrane-anchored ubiquitin-fold protein 22.5e-3773Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MA V DQLEIKFRLNDGSDIGPK FP AT++ATLKE+++AQWPR +KENGP+TVKDVKLISAG+ILENN+T+ DCRSP+ +  G+VTTMHV+IQ    EK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK

AT5G15460.2 membrane-anchored ubiquitin-fold protein 22.5e-3773Show/hide
Query:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK
        MA V DQLEIKFRLNDGSDIGPK FP AT++ATLKE+++AQWPR +KENGP+TVKDVKLISAG+ILENN+T+ DCRSP+ +  G+VTTMHV+IQ    EK
Subjt:  MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGAGTGGGAGATCAATTAGAGATCAAGTTTCGATTGAACGATGGATCTGATATCGGTCCTAAAACCTTCCCGGCTGCCACAAGCATCGCAACCTTGAAAGAAAG
CATTCTTGCACAATGGCCAAGAGCAGAAAAGGAGAATGGTCCAAGAACAGTTAAGGACGTCAAGTTAATAAGTGCAGGAAAAATCTTAGAGAATAACAGAACACTTAATG
ATTGCAGAAGCCCATTATATGACATTCCTGGAAGTGTGACAACCATGCATGTTGTAATCCAACCACCAAGTTTGGAGAAAGGTATAATTTGTTCTATAAAAAGC
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGAGTGGGAGATCAATTAGAGATCAAGTTTCGATTGAACGATGGATCTGATATCGGTCCTAAAACCTTCCCGGCTGCCACAAGCATCGCAACCTTGAAAGAAAG
CATTCTTGCACAATGGCCAAGAGCAGAAAAGGAGAATGGTCCAAGAACAGTTAAGGACGTCAAGTTAATAAGTGCAGGAAAAATCTTAGAGAATAACAGAACACTTAATG
ATTGCAGAAGCCCATTATATGACATTCCTGGAAGTGTGACAACCATGCATGTTGTAATCCAACCACCAAGTTTGGAGAAAGGTATAATTTGTTCTATAAAAAGC
Protein sequenceShow/hide protein sequence
MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEKGIICSIKS