CuGenDBv2

Gene ID	MS003275
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	scaffold234:1714304..1714654
RNA-Seq Expression	MS003275
Synteny	MS003275
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AMX27447.1 PsaB, partial [Herminium humidicola]

4.3e-61

100

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

CBB12368.1 Photosystem I P700 chlorophyll A apoprotein, partial [Vanilla cf. phalaenopsis AB-2009]

4.3e-61

100

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

QRI60829.1 photosystem I P700 chlorophyll a apoprotein A2 [Millettia dura]

4.3e-61

100

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

YP_009262290.1 photosystem I P700 apoprotein A2 [Spondias tuberosa]

4.3e-61

100

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

YP_009263860.1 photosystem I P700 chlorophyll a [Dactyladenia bellayana]

4.3e-61

100

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

TrEMBL top hits

e value

%identity

Alignment

A0A0Y0TUI1 Photosystem I P700 chlorophyll a apoprotein A2

2.1e-61

100

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

A0A1X9QHA3 Photosystem I P700 chlorophyll a apoprotein A2

2.1e-61

100

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

A0A650G6Q0 Photosystem I P700 chlorophyll a apoprotein A2

2.1e-61

100

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

A0A7D5B4B3 Photosystem I P700 chlorophyll a apoprotein A2

2.1e-61

100

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

K4K7I2 Photosystem I (Fragment)

2.1e-61

100

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

SwissProt top hits

e value

%identity

Alignment

A6MMK6 Photosystem I P700 chlorophyll a apoprotein A2

1.6e-63

98.29

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAF+FLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNS+HFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

Q06RD2 Photosystem I P700 chlorophyll a apoprotein A2

1.3e-63

99.15

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLL+AHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

Q09MH9 Photosystem I P700 chlorophyll a apoprotein A2

5.6e-64

100

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

Q3BAP1 Photosystem I P700 chlorophyll a apoprotein A2

9.6e-64

99.15

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAF+FLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

Q6EW49 Photosystem I P700 chlorophyll a apoprotein A2

9.6e-64

99.15

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNS+HFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

1.7e-63

95.73

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GGFHPQTQSLWLTD+AHHHLAIA +FL+AGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNS+HFQLGLALASLGVITSLVAQHMYSLPAY
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
        AFIAQDFTTQAALYTHH
Subjt:  AFIAQDFTTQAALYTHH

ATCG00350.1 Photosystem I, PsaA/PsaB protein

1.9e-38

62.39

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Query:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY
        GG  P T  LWLTDIAHHHLAIA +FL+AGHMYRTN+GIGH IKD+LEAH   G   G+GHKGLY+ +  S H QL L LA LG +T +VA HMYS+P Y
Subjt:  GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAY

Query:  AFIAQDFTTQAALYTHH
         ++A D+ TQ +L+THH
Subjt:  AFIAQDFTTQAALYTHH

Sequences

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CDS sequence

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GGGGGATTCCATCCGCAAACGCAAAGTTTATGGCTGACTGATATTGCTCATCATCATTTAGCTATTGCATTTATTTTTCTTGTTGCTGGTCATATGTATAGAACTAACTT
CGGGATTGGACACAGTATAAAAGATCTTTTAGAAGCACATATTCCGCCGGGGGGACGATTGGGGCGTGGACATAAAGGTCTTTATGACACAATCAATAATTCGCTTCATT
TTCAATTAGGCCTTGCTTTAGCCTCTTTAGGGGTTATTACTTCCTTGGTAGCTCAACACATGTACTCTTTACCTGCTTATGCGTTCATAGCACAAGACTTTACTACTCAA
GCTGCGTTATATACCCATCAC

mRNA sequence

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Protein sequence

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GGFHPQTQSLWLTDIAHHHLAIAFIFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAYAFIAQDFTTQ
AALYTHH

MS003275 (gene) of Bitter gourd (TR) v1 genome