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MS003277 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003277
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein SPIRAL1-like 3
Genome locationscaffold234:1730351..1731078
RNA-Seq ExpressionMS003277
SyntenyMS003277
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602534.1 putative methylesterase 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4287.74Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        MGRGVSSGGGQSSLGYLFGGGEPANNVQAS+KPNGSSQPTSST+Q  DK+I    PAGIP N TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGNGRS
        FGNG+S
Subjt:  FGNGRS

KAG7033210.1 Protein SPIRAL1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-4186.79Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        MGRGVSSGGGQSSLGYLFGGGEPANNVQAS+K NGSSQPTSST+Q  DK+I    PAGIP N TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGNGRS
        FGNG+S
Subjt:  FGNGRS

XP_022134514.1 protein SPIRAL1-like 3 [Momordica charantia]6.9e-5099.06Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPAN TNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGNGRS
        FGNGRS
Subjt:  FGNGRS

XP_022954496.1 protein SPIRAL1-like 3 [Cucurbita moschata]3.1e-4287.74Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        MGRGVSSGGGQSSLGYLFGGGEPANNVQAS+KPNGSSQPTSST+Q  DK+I    PAGIP N TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGNGRS
        FGNG+S
Subjt:  FGNGRS

XP_038889735.1 protein SPIRAL1-like 1 [Benincasa hispida]1.3e-3580.19Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        M RGVSSGGGQSSLGYLFG GEPAN+VQ SQK  GSSQ  +ST+  TDK      PAGIP + TNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGNGRS
        FGNGRS
Subjt:  FGNGRS

TrEMBL top hitse value%identityAlignment
A0A1J7IHS1 Uncharacterized protein3.6e-2861.11Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQAS------------QKPNGSSQPTSSTAQATDKN-----------IPAGVPAGIPANRTNNYYRADGQNCGN
        MGRGVSSGGGQSSLGYLFGGGE  NNVQ S            Q P+ +SQP S+    T  +           I  G+PAGIP N  NNY+RADGQNCGN
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQAS------------QKPNGSSQPTSSTAQATDKN-----------IPAGVPAGIPANRTNNYYRADGQNCGN

Query:  FITDRPSTKVHAAPGGGSSLDFLFGN
        FITDRPSTKVHAAPGGGSSL +LFG+
Subjt:  FITDRPSTKVHAAPGGGSSLDFLFGN

A0A6A5N8H9 Uncharacterized protein2.7e-2861.11Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQAS------------QKPNGSSQPTSSTAQAT-----------DKNIPAGVPAGIPANRTNNYYRADGQNCGN
        MGRGVSSGGGQSSLGYLFG GE  NNVQ S            Q P+G+SQP S+    T              I  G+PAGIP N  NNY+RADGQNCGN
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQAS------------QKPNGSSQPTSSTAQAT-----------DKNIPAGVPAGIPANRTNNYYRADGQNCGN

Query:  FITDRPSTKVHAAPGGGSSLDFLFGN
        FITDRPSTKVHAAPGGGSSL +LFG+
Subjt:  FITDRPSTKVHAAPGGGSSLDFLFGN

A0A6J1BYY1 protein SPIRAL1-like 33.3e-5099.06Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPAN TNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGNGRS
        FGNGRS
Subjt:  FGNGRS

A0A6J1GRA9 protein SPIRAL1-like 31.5e-4287.74Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        MGRGVSSGGGQSSLGYLFGGGEPANNVQAS+KPNGSSQPTSST+Q  DK+I    PAGIP N TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGNGRS
        FGNG+S
Subjt:  FGNGRS

A0A6J1JRI1 protein SPIRAL1-like 31.5e-4287.74Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        MGRGVSSGGGQSSLGYLFGGGEPANNVQAS+KPNGSSQPTSST+Q  DK+I    PAGIP N TNNY+RADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGNGRS
        FGNG+S
Subjt:  FGNGRS

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 17.2e-2663.39Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGE---PA-NNVQA--SQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGG
        MGRGVS GGGQSSLGYLFG GE   PA NN  A  S+    S+ P+     A   N+   +PAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGG
Subjt:  MGRGVSSGGGQSSLGYLFGGGE---PA-NNVQA--SQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGG

Query:  SSLDFLFGNGRS
        SSLD+LFG G S
Subjt:  SSLDFLFGNGRS

Q2QQ99 Protein SPIRAL1-like 32.1e-2560.95Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL
        MGRGVSSGGGQSSLGYLFGGGE     ++++KP    +P  S++    K I    PAGI +++ NNY RA+GQNCGNF+TDRPSTKV AAPGGGSSLD+L
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFL

Query:  FGNGR
        F   +
Subjt:  FGNGR

Q2R0W8 Protein SPIRAL1-like 21.0e-2457.14Show/hide
Query:  GRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAG-----------VPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAA
        GRGVSSGGGQSSLGYLFGGGE A   +A  KP  +++  ++ A      + A            +PAGI + + NNY+RA GQNCGNF+TDRPSTKVHAA
Subjt:  GRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAG-----------VPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAA

Query:  PGGGSSLDFLFG
        PGGGSSL +LFG
Subjt:  PGGGSSLDFLFG

Q9LE54 Protein SPIRAL1-like 26.1e-2559.63Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGS
        MGRGVS+GGGQSSLGYLFG GE       N   A  + +  + PT + A     +I   VPAG+ +N  NNY RA+GQN GNFITDRPSTKVH+APGGGS
Subjt:  MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGS

Query:  SLDFLFGNG
        SLD+LFG G
Subjt:  SLDFLFGNG

Q9LF22 Protein SPIRAL1-like 46.3e-2252.07Show/hide
Query:  RGVSSGGGQSSLGYLFGGGEPANNVQASQKPN-------------------GSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRP
        RGV+SGGG+SSLGYLFG GE   +V    KPN                   G  + T++T    DKN      AG+  +  NNYYR+DGQNCGNF+T+RP
Subjt:  RGVSSGGGQSSLGYLFGGGEPANNVQASQKPN-------------------GSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRP

Query:  STKVHAAPGGGSSLDFLFGNG
        STKVHAAPGGGSSL +LFG+G
Subjt:  STKVHAAPGGGSSLDFLFGNG

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like15.1e-2763.39Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGE---PA-NNVQA--SQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGG
        MGRGVS GGGQSSLGYLFG GE   PA NN  A  S+    S+ P+     A   N+   +PAGI  + TNNY RADGQN GNF+TDRPSTKVHAAPGGG
Subjt:  MGRGVSSGGGQSSLGYLFGGGE---PA-NNVQA--SQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGG

Query:  SSLDFLFGNGRS
        SSLD+LFG G S
Subjt:  SSLDFLFGNGRS

AT1G69230.1 SPIRAL1-like24.3e-2659.63Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGS
        MGRGVS+GGGQSSLGYLFG GE       N   A  + +  + PT + A     +I   VPAG+ +N  NNY RA+GQN GNFITDRPSTKVH+APGGGS
Subjt:  MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGS

Query:  SLDFLFGNG
        SLD+LFG G
Subjt:  SLDFLFGNG

AT1G69230.2 SPIRAL1-like24.3e-2659.63Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGS
        MGRGVS+GGGQSSLGYLFG GE       N   A  + +  + PT + A     +I   VPAG+ +N  NNY RA+GQN GNFITDRPSTKVH+APGGGS
Subjt:  MGRGVSSGGGQSSLGYLFGGGE-----PANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGS

Query:  SLDFLFGNG
        SLD+LFG G
Subjt:  SLDFLFGNG

AT2G03680.1 spiral11.4e-2151.67Show/hide
Query:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKP------NGSSQP---------TSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPST
        MGRG S GGGQSSL YLFGG  PA     + +P      NG + P         T++T       +   +PAGI     NNY RA+GQN GNF+TDRPST
Subjt:  MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKP------NGSSQP---------TSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPST

Query:  KVHAAPGGGSSLDFLFGNGR
        KVHAAPGGGSSLD+LF  G+
Subjt:  KVHAAPGGGSSLDFLFGNGR

AT5G15600.1 SPIRAL1-like44.5e-2352.07Show/hide
Query:  RGVSSGGGQSSLGYLFGGGEPANNVQASQKPN-------------------GSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRP
        RGV+SGGG+SSLGYLFG GE   +V    KPN                   G  + T++T    DKN      AG+  +  NNYYR+DGQNCGNF+T+RP
Subjt:  RGVSSGGGQSSLGYLFGGGEPANNVQASQKPN-------------------GSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRP

Query:  STKVHAAPGGGSSLDFLFGNG
        STKVHAAPGGGSSL +LFG+G
Subjt:  STKVHAAPGGGSSLDFLFGNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGTGGAGTTAGCAGCGGTGGTGGACAGAGCTCCTTGGGCTACCTGTTTGGAGGCGGAGAACCTGCCAACAATGTGCAAGCTTCTCAGAAACCCAATGGATCTTC
TCAGCCTACCTCTTCTACCGCGCAAGCTACCGATAAAAACATACCTGCTGGCGTTCCTGCTGGCATTCCCGCGAATCGTACTAACAATTACTACAGGGCGGATGGACAGA
ACTGTGGGAACTTTATCACGGATCGCCCATCGACCAAGGTTCACGCCGCACCTGGTGGCGGGTCTTCGCTGGACTTCCTTTTTGGAAACGGTAGGAGC
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGTGGAGTTAGCAGCGGTGGTGGACAGAGCTCCTTGGGCTACCTGTTTGGAGGCGGAGAACCTGCCAACAATGTGCAAGCTTCTCAGAAACCCAATGGATCTTC
TCAGCCTACCTCTTCTACCGCGCAAGCTACCGATAAAAACATACCTGCTGGCGTTCCTGCTGGCATTCCCGCGAATCGTACTAACAATTACTACAGGGCGGATGGACAGA
ACTGTGGGAACTTTATCACGGATCGCCCATCGACCAAGGTTCACGCCGCACCTGGTGGCGGGTCTTCGCTGGACTTCCTTTTTGGAAACGGTAGGAGC
Protein sequenceShow/hide protein sequence
MGRGVSSGGGQSSLGYLFGGGEPANNVQASQKPNGSSQPTSSTAQATDKNIPAGVPAGIPANRTNNYYRADGQNCGNFITDRPSTKVHAAPGGGSSLDFLFGNGRS