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MS003279 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003279
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold234:1738795..1739139
RNA-Seq ExpressionMS003279
SyntenyMS003279
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039429.1 hypothetical protein E6C27_scaffold64G002360 [Cucumis melo var. makuwa]1.2e-0433.64Show/hide
Query:  VAMAAMMVVFLSST-NCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKK
        V +  M +  LSS+ +CR S+LMK+NATYG        G+S       E+++   + RFL    +KP T  T   N+  C +G GN  G C G+  ++++
Subjt:  VAMAAMMVVFLSST-NCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKK

Query:  CPTYGGSATC
        C  Y  +  C
Subjt:  CPTYGGSATC

KAA0039430.1 hypothetical protein E6C27_scaffold64G002370 [Cucumis melo var. makuwa]3.2e-0835.78Show/hide
Query:  VAMAAMMVVFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKC
        V +  ++ +F SS +CR S+L+K+NATY              V +  EL++   + R+L F     KT  T ++NV  CG+GAGN    C+G   +KKKC
Subjt:  VAMAAMMVVFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKC

Query:  PTYGGSATC
          Y G   C
Subjt:  PTYGGSATC

KAG6578548.1 hypothetical protein SDJN03_22996, partial [Cucurbita argyrosperma subsp. sororia]3.6e-1243.86Show/hide
Query:  FPAVAMAAMMV--VFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPK
        F  VA+AA+MV  +  SS + RAS L ++NATYG               V  EL+V   +ARFL+FK+ K  TD T+N  V +CG+G GNP G C+G P 
Subjt:  FPAVAMAAMMV--VFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPK

Query:  SKKKCPTYGGSATC
        +KK C +Y G++ C
Subjt:  SKKKCPTYGGSATC

KGN52518.1 hypothetical protein Csa_007870 [Cucumis sativus]1.7e-0634.86Show/hide
Query:  VAMAAMMVVFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKC
        V +  ++ +  SS  CRAS+L+K+NATYG        G+     + AEL++   V R+L +     KT  TK++ V  C +G GN    C G   +KK+C
Subjt:  VAMAAMMVVFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKC

Query:  PTYGGSATC
          YG    C
Subjt:  PTYGGSATC

KGN52519.1 hypothetical protein Csa_008872 [Cucumis sativus]3.0e-0635.45Show/hide
Query:  VAMAAMMVVFLSST-NCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKK
        V +  M +  LSS+ +CR SILMK+NAT G               +  EL++   + R+L FK     T AT + N+ TCG+GAGN    C G+  + ++
Subjt:  VAMAAMMVVFLSST-NCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKK

Query:  CPTYGGSATC
        C  Y G   C
Subjt:  CPTYGGSATC

TrEMBL top hitse value%identityAlignment
A0A0A0KSJ4 Uncharacterized protein8.4e-0734.86Show/hide
Query:  VAMAAMMVVFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKC
        V +  ++ +  SS  CRAS+L+K+NATYG        G+     + AEL++   V R+L +     KT  TK++ V  C +G GN    C G   +KK+C
Subjt:  VAMAAMMVVFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKC

Query:  PTYGGSATC
          YG    C
Subjt:  PTYGGSATC

A0A0A0KUG7 Uncharacterized protein1.4e-0635.45Show/hide
Query:  VAMAAMMVVFLSST-NCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKK
        V +  M +  LSS+ +CR SILMK+NAT G               +  EL++   + R+L FK     T AT + N+ TCG+GAGN    C G+  + ++
Subjt:  VAMAAMMVVFLSST-NCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKK

Query:  CPTYGGSATC
        C  Y G   C
Subjt:  CPTYGGSATC

A0A0A0KVT8 Uncharacterized protein6.4e-0734.86Show/hide
Query:  VAMAAMMVVFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKC
        V +  ++ +  SS +CR S+L+K+NATY              V +  ELM+   + R L    +K KT  T  RNV  CG+GAGN    C G   ++ KC
Subjt:  VAMAAMMVVFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKC

Query:  PTYGGSATC
          Y G   C
Subjt:  PTYGGSATC

A0A5D3BNE4 Uncharacterized protein6.0e-0533.64Show/hide
Query:  VAMAAMMVVFLSST-NCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKK
        V +  M +  LSS+ +CR S+LMK+NATYG        G+S       E+++   + RFL    +KP T  T   N+  C +G GN  G C G+  ++++
Subjt:  VAMAAMMVVFLSST-NCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKK

Query:  CPTYGGSATC
        C  Y  +  C
Subjt:  CPTYGGSATC

A0A5D3BR80 Uncharacterized protein1.5e-0835.78Show/hide
Query:  VAMAAMMVVFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKC
        V +  ++ +F SS +CR S+L+K+NATY              V +  EL++   + R+L F     KT  T ++NV  CG+GAGN    C+G   +KKKC
Subjt:  VAMAAMMVVFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKC

Query:  PTYGGSATC
          Y G   C
Subjt:  PTYGGSATC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTCGTCTTTTTCCTGCAGTGGCAATGGCGGCGATGATGGTGGTGTTCCTCTCTTCCACCAATTGCAGAGCTTCGATACTGATGAAATCCAACGCCACCTACGGTTGCGG
CGGCGGCGGCGAATGTTTGGGAATCTCGGAGGCGGTGGCGGTGGCGGCGGAGTTGATGGTGGGTAGCCACGTGGCGCGGTTTCTGGATTTTAAAGACAACAAACCGAAAA
CAGATGCGACGAAAAACCGTAATGTGGGGACCTGCGGGAGCGGCGCCGGAAACCCTAAGGGCGCCTGCAACGGCGACCCGAAGAGTAAAAAAAAATGCCCCACGTACGGC
GGCTCCGCCACCTGC
mRNA sequenceShow/hide mRNA sequence
GGTCGTCTTTTTCCTGCAGTGGCAATGGCGGCGATGATGGTGGTGTTCCTCTCTTCCACCAATTGCAGAGCTTCGATACTGATGAAATCCAACGCCACCTACGGTTGCGG
CGGCGGCGGCGAATGTTTGGGAATCTCGGAGGCGGTGGCGGTGGCGGCGGAGTTGATGGTGGGTAGCCACGTGGCGCGGTTTCTGGATTTTAAAGACAACAAACCGAAAA
CAGATGCGACGAAAAACCGTAATGTGGGGACCTGCGGGAGCGGCGCCGGAAACCCTAAGGGCGCCTGCAACGGCGACCCGAAGAGTAAAAAAAAATGCCCCACGTACGGC
GGCTCCGCCACCTGC
Protein sequenceShow/hide protein sequence
GRLFPAVAMAAMMVVFLSSTNCRASILMKSNATYGCGGGGECLGISEAVAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKCPTYG
GSATC