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MS003282 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003282
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSmall acidic-like protein
Genome locationscaffold234:1748938..1749552
RNA-Seq ExpressionMS003282
SyntenyMS003282
Gene Ontology termsNA
InterPro domainsIPR019351 - Protein of unknown function DUF2039


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602535.1 Eukaryotic translation initiation factor 3 subunit M, partial [Cucurbita argyrosperma subsp. sororia]1.5e-5290.48Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD
        +K G PKHQN+YAWKPNAG KINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKRAVRQAYHNLCPGCAK+QGVCAKCRCRVD
Subjt:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD

Query:  HTVGR
         T+GR
Subjt:  HTVGR

KAG7033212.1 hypothetical protein SDJN02_07266 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-5290.48Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD
        +K G PKHQN+YAWKPNAG KINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKRAVRQAYHNLCPGCAK+QGVCAKCRCRVD
Subjt:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD

Query:  HTVGR
         T+GR
Subjt:  HTVGR

XP_004141470.1 uncharacterized protein LOC101206376 [Cucumis sativus]1.5e-5292.31Show/hide
Query:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH
        K GPPKHQN+YAWKPNAG KINETEVGGRFRPLS ITGVCLRCKDQIDWKRRYGKYKPL+EP KCQLCSKR VRQAYHNLCPGCAKEQGVCAKCRCRVD 
Subjt:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH

Query:  TVGR
        TVGR
Subjt:  TVGR

XP_008459394.1 PREDICTED: uncharacterized protein LOC103498541 [Cucumis melo]2.3e-5394.23Show/hide
Query:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH
        K GPPKHQNRYAWKPNAG KINETEVGGRFRPLS ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKR VRQAYHNLCPGCAKEQGVCAKCRCRVD 
Subjt:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH

Query:  TVGR
        TVGR
Subjt:  TVGR

XP_022133854.1 uncharacterized protein LOC111006305 [Momordica charantia]8.2e-59100Show/hide
Query:  SKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCR
        SKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCR
Subjt:  SKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCR

Query:  VDHTVGR
        VDHTVGR
Subjt:  VDHTVGR

TrEMBL top hitse value%identityAlignment
A0A0A0KSJ8 Uncharacterized protein7.2e-5392.31Show/hide
Query:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH
        K GPPKHQN+YAWKPNAG KINETEVGGRFRPLS ITGVCLRCKDQIDWKRRYGKYKPL+EP KCQLCSKR VRQAYHNLCPGCAKEQGVCAKCRCRVD 
Subjt:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH

Query:  TVGR
        TVGR
Subjt:  TVGR

A0A1S3CAL0 uncharacterized protein LOC1034985411.1e-5394.23Show/hide
Query:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH
        K GPPKHQNRYAWKPNAG KINETEVGGRFRPLS ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKR VRQAYHNLCPGCAKEQGVCAKCRCRVD 
Subjt:  KAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDH

Query:  TVGR
        TVGR
Subjt:  TVGR

A0A6J1BX54 uncharacterized protein LOC1110063054.0e-59100Show/hide
Query:  SKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCR
        SKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCR
Subjt:  SKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCR

Query:  VDHTVGR
        VDHTVGR
Subjt:  VDHTVGR

A0A6J1GR32 glutamic acid-rich protein isoform X17.2e-5390.48Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD
        +K G PKHQN+YAWKPNAG KINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKRAVRQAYHNLCPGCAK+QGVCAKCRCRVD
Subjt:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD

Query:  HTVGR
         T+GR
Subjt:  HTVGR

A0A6J1JP90 ribosome biogenesis protein BOP1 homolog isoform X17.2e-5390.48Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD
        +K G PKHQN+YAWKPNAG KINETEVGGRFRPLS+ITGVCLRCKDQIDWKRRYGKYKPL+EPAKCQLCSKRAVRQAYHNLCPGCAK+QGVCAKCRCRVD
Subjt:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD

Query:  HTVGR
         T+GR
Subjt:  HTVGR

SwissProt top hitse value%identityAlignment
Q68FU5 Uncharacterized protein C9orf85 homolog4.9e-1437.89Show/hide
Query:  KAGPPKHQNRYAWKPNAGVKINET-EVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKC
        ++ P KHQN + +K +   K  +T ++  +        GVC RCK+ ++W+ +Y KYKPL++P KC  C ++ V+ +YH +C  CA +  VCAKC
Subjt:  KAGPPKHQNRYAWKPNAGVKINET-EVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKC

Q96MD7 Uncharacterized protein C9orf853.4e-1538.61Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINET-EVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRV
        A++ P KHQN +++K +   K  +T ++  +        GVC RCK+ ++W+ +Y KYKPL++P KC  C ++ V+ +YH +C  CA E  VCAKC  + 
Subjt:  AKAGPPKHQNRYAWKPNAGVKINET-EVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRV

Query:  D
        D
Subjt:  D

Q9CQ90 Uncharacterized protein C9orf85 homolog1.7e-1438.95Show/hide
Query:  KAGPPKHQNRYAWKPNAGVKINET-EVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKC
        ++ P KHQN + +K +   K  +T ++  +        GVC RCK+ ++W+ +Y KYKPL++P KC  C ++ V+ +YH +C  CA E  VCAKC
Subjt:  KAGPPKHQNRYAWKPNAGVKINET-EVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKC

Arabidopsis top hitse value%identityAlignment
AT3G02220.1 unknown protein4.6e-4473.33Show/hide
Query:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD
        ++ GPPKHQN++AW P AGVKINETEVGGRFRPLS+ITGVC RC++QI WKR+YGKYK L E  KCQ C+KR VRQAYH LCPGCAKEQ VCAKC   VD
Subjt:  AKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVD

Query:  HTVGR
          +GR
Subjt:  HTVGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCAAGGCAAAGGCAGGCCCCCCGAAGCACCAAAACAGATACGCCTGGAAACCAAACGCCGGCGTCAAAATCAACGAAACTGAGGTTGGAGGCAGGTTCCGCCCGCTTTC
CCAGATCACCGGAGTTTGCCTTCGCTGCAAGGACCAAATCGATTGGAAACGCCGCTACGGCAAGTACAAACCCCTTGCCGAACCCGCCAAATGTCAACTATGTTCCAAGC
GGGCTGTTCGTCAAGCCTATCATAATCTCTGCCCTGGCTGTGCCAAAGAGCAAGGTGTGTGCGCGAAGTGTCGTTGTCGTGTAGACCATACTGTTGGAAGG
mRNA sequenceShow/hide mRNA sequence
AGCAAGGCAAAGGCAGGCCCCCCGAAGCACCAAAACAGATACGCCTGGAAACCAAACGCCGGCGTCAAAATCAACGAAACTGAGGTTGGAGGCAGGTTCCGCCCGCTTTC
CCAGATCACCGGAGTTTGCCTTCGCTGCAAGGACCAAATCGATTGGAAACGCCGCTACGGCAAGTACAAACCCCTTGCCGAACCCGCCAAATGTCAACTATGTTCCAAGC
GGGCTGTTCGTCAAGCCTATCATAATCTCTGCCCTGGCTGTGCCAAAGAGCAAGGTGTGTGCGCGAAGTGTCGTTGTCGTGTAGACCATACTGTTGGAAGG
Protein sequenceShow/hide protein sequence
SKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDHTVGR