; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003289 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003289
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF3317)
Genome locationscaffold234:1807069..1807650
RNA-Seq ExpressionMS003289
SyntenyMS003289
Gene Ontology termsGO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR024512 - Small subunit of serine palmitoyltransferase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016096.1 hypothetical protein SDJN02_21200, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-2196.23Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNWIQRK+YLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDL KR
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
XP_004141475.1 uncharacterized protein LOC101207494 [Cucumis sativus]2.3e-2296.23Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNWIQRKIYLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVND+CKR
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
XP_008459402.1 PREDICTED: uncharacterized protein LOC103498548 [Cucumis melo]2.3e-2296.23Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNWIQRKIYLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVND+CKR
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
XP_022134536.1 uncharacterized protein LOC111006754 [Momordica charantia]2.3e-2298.11Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGS+YVNDLCKR
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
XP_038889912.1 uncharacterized protein LOC120079682 [Benincasa hispida]8.0e-23100Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
TrEMBL top hitse value%identityAlignment
A0A1S3C9L1 uncharacterized protein LOC1034985481.1e-2296.23Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNWIQRKIYLYNVTFGLYMLDWWERILFNT+VVVLMWFMFYNGSRYVND+CKR
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
A0A6J1BY20 uncharacterized protein LOC1110067541.1e-2298.11Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGS+YVNDLCKR
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
A0A6J1FLX2 uncharacterized protein LOC1114454199.5e-2296.23Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNWIQRK+YLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDL KR
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
A0A6J1JYU1 uncharacterized protein LOC1114891129.5e-2296.23Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNWIQRK+YLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDL KR
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
A0A6P5SRN0 uncharacterized protein LOC1107587392.3e-2088.68Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNW+QRKIYLYNVTFGLYMLDWWER LFNTLVVVLMWF+FYNGSRYV + CKR
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06515.1 Protein of unknown function (DUF3317)7.9e-2179.25Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNW+QRKIYLYNVTFGLYMLDWWER LFN+LVVVLMWF+ YNG+RY ++L +R
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
AT1G06515.2 Protein of unknown function (DUF3317)7.9e-2179.25Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNW+QRKIYLYNVTFGLYMLDWWER LFN+LVVVLMWF+ YNG+RY ++L +R
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
AT2G30942.1 Protein of unknown function (DUF3317)1.9e-2281.13Show/hide
Query:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR
        MNW+QRKIYLYNVTFGLYMLDWWER LFN+LV++LMWF+ YNGSRY ++LCKR
Subjt:  MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGGATACAGCGAAAGATCTACCTTTACAACGTCACGTTTGGGCTTTACATGTTGGATTGGTGGGAGCGAATCCTCTTCAATACATTGGTGGTTGTGTTGATGTG
GTTCATGTTTTACAATGGATCACGATACGTAAATGATTTGTGCAAGAGG
mRNA sequenceShow/hide mRNA sequence
ATGAATTGGATACAGCGAAAGATCTACCTTTACAACGTCACGTTTGGGCTTTACATGTTGGATTGGTGGGAGCGAATCCTCTTCAATACATTGGTGGTTGTGTTGATGTG
GTTCATGTTTTACAATGGATCACGATACGTAAATGATTTGTGCAAGAGG
Protein sequenceShow/hide protein sequence
MNWIQRKIYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLCKR