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MS003306 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003306
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAdenosylmethionine decarboxylase
Genome locationscaffold234:1957220..1957351
RNA-Seq ExpressionMS003306
SyntenyMS003306
Gene Ontology termsGO:0006557 - S-adenosylmethioninamine biosynthetic process (biological process)
GO:0006597 - spermine biosynthetic process (biological process)
GO:0008295 - spermidine biosynthetic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0004014 - adenosylmethionine decarboxylase activity (molecular function)
InterPro domainsIPR012511 - S-adenosyl-l-methionine decarboxylase leader peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP35634.1 hypothetical protein KK1_043309, partial [Cajanus cajan]9.6e-0666.67Show/hide
Query:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVSTQ
        SSSS SK + +EAPLGY  ED+RP G +KK +SAAYSNVS Q
Subjt:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVSTQ
KZN06376.1 hypothetical protein DCAR_007213 [Daucus carota subsp. sativus]2.8e-0569.23Show/hide
Query:  SSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVS
        SSS SK + +EAPLGY  ED+RP G +KK KSAAYSNVS
Subjt:  SSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVS
OWM89417.1 hypothetical protein CDL15_Pgr024165 [Punica granatum]3.6e-0567.5Show/hide
Query:  SSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVST
        SSS SK + +EAPLGY  EDVRP G +KK +SAAYSNVS+
Subjt:  SSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVST
RDX90779.1 hypothetical protein CR513_27324, partial [Mucuna pruriens]3.3e-0668.18Show/hide
Query:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVSTQLL
        SSSS SK + +EAPLGY  EDVRP G +KK +SAAYSNV T LL
Subjt:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVSTQLL
WP_195048677.1 hypothetical protein, partial [Nocardia cyriacigeorgica]9.6e-0663.64Show/hide
Query:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVSTQLL
        SSSS SK + +EAPLGY  ED+RP G +KK +SAAYSNVS +L+
Subjt:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVSTQLL
TrEMBL top hitse value%identityAlignment
A0A151QZ93 Uncharacterized protein (Fragment)4.6e-0666.67Show/hide
Query:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVSTQ
        SSSS SK + +EAPLGY  ED+RP G +KK +SAAYSNVS Q
Subjt:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVSTQ
A0A166ECD9 S-adenosylmethionine decarboxylase alpha chain1.4e-0569.23Show/hide
Query:  SSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVS
        SSS SK + +EAPLGY  ED+RP G +KK KSAAYSNVS
Subjt:  SSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVS
A0A371GJN6 Uncharacterized protein (Fragment)1.6e-0668.18Show/hide
Query:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVSTQLL
        SSSS SK + +EAPLGY  EDVRP G +KK +SAAYSNV T LL
Subjt:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVSTQLL
A0A445LNG0 Uncharacterized protein1.8e-0570Show/hide
Query:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVS
        SSSS SK I +EAPLGY  EDVRP G +KK +SAAYSN S
Subjt:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVS
I1JEP5 Uncharacterized protein1.8e-0570Show/hide
Query:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVS
        SSSS SK I +EAPLGY  EDVRP G +KK +SAAYSN S
Subjt:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02468.1 conserved peptide upstream open reading frame 95.4e-0760.53Show/hide
Query:  SSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVS
        SS S  + +EAPLGY  EDVRP G +KK KS+ YSN S
Subjt:  SSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVS
AT3G25572.1 conserved peptide upstream open reading frame 117.1e-0757.5Show/hide
Query:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVS
        S+SS    + FEAPL Y  EDVRP G +KK +SAAYSN++
Subjt:  SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVS
AT5G15948.1 conserved peptide upstream open reading frame 101.0e-0558.33Show/hide
Query:  SSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSN
        SS +  + +EAPLGY  EDVRP G +KK KS+ YSN
Subjt:  SSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTAGTAGTAGTATAAGTAAATTCATCCATTTCGAAGCTCCCCTTGGTTACATCACCGAAGACGTTCGACCTCGTGGCAATATGAAGAAGTTAAAATCTGCTGCTTACTC
CAACGTAAGTACCCAGTTGCTG
mRNA sequenceShow/hide mRNA sequence
TCTAGTAGTAGTATAAGTAAATTCATCCATTTCGAAGCTCCCCTTGGTTACATCACCGAAGACGTTCGACCTCGTGGCAATATGAAGAAGTTAAAATCTGCTGCTTACTC
CAACGTAAGTACCCAGTTGCTG
Protein sequenceShow/hide protein sequence
SSSSISKFIHFEAPLGYITEDVRPRGNMKKLKSAAYSNVSTQLL