; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003321 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003321
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncyclin-B1-2-like
Genome locationscaffold234:2049970..2052595
RNA-Seq ExpressionMS003321
SyntenyMS003321
Gene Ontology termsGO:0043248 - proteasome assembly (biological process)
GO:0000502 - proteasome complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR008012 - Proteasome maturation factor Ump1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033243.1 Cyclin-B1-2 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-7398.58Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT+EEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDD
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

XP_022134554.1 cyclin-B1-2-like [Momordica charantia]1.4e-74100Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

XP_022956483.1 cyclin-B1-2-like [Cucurbita moschata]4.5e-7397.87Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT+EEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDD
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPRESESLRPLDMHHG+EVRLGLSKGPVCPSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

XP_022989933.1 cyclin-B1-2-like [Cucurbita maxima]4.5e-7397.87Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRT+EEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDD
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

XP_023541108.1 cyclin-B1-2-like [Cucurbita pepo subsp. pepo]4.5e-7397.87Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT+EEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTG LDD
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

TrEMBL top hitse value%identityAlignment
A0A0A0KUK6 Uncharacterized protein2.4e-7296.45Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        MESSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT EEMKRK+LVNTYGSAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDD
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

A0A5D3BR37 Cyclin-B1-24.1e-7296.45Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        M+SSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT EEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDD
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

A0A6J1BZ23 cyclin-B1-2-like6.8e-75100Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

A0A6J1GWZ3 cyclin-B1-2-like2.2e-7397.87Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT+EEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDD
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPRESESLRPLDMHHG+EVRLGLSKGPVCPSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

A0A6J1JRS1 cyclin-B1-2-like2.2e-7397.87Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRT+EEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDD
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

SwissProt top hitse value%identityAlignment
Q0DWQ7 Cyclin-B1-21.4e-2453.91Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGL-QGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLD
        M S   +  EIGG  +D +RFG+   VK DL   HP+++      +   + KR      YGSAF ++ DLD QILS+FQRPPGA+PSSMLG EALTGSLD
Subjt:  MESSKTIAHEIGGIQNDALRFGL-QGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLD

Query:  DFGFEDYLNDPRESE
        DFGFEDYLN    SE
Subjt:  DFGFEDYLNDPRESE

Q3SZV5 Proteasome maturation protein3.5e-1237.07Show/hide
Query:  NDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESES
        +D LR G   VK++L+ SHP+E   +  +   ++M    L N  G   PLK+ ++ + + + QR P  +PSS L L+ L G+ +  GFED LNDP +SE 
Subjt:  NDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESES

Query:  LRPLDMHHGMEVRLGL
        +   + H  +E +LGL
Subjt:  LRPLDMHHGMEVRLGL

Q55G18 Proteasome maturation protein homolog2.4e-1338.74Show/hide
Query:  LQGVKSDLVG-SHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDM
        L+   S++ G SHPVES+     +T+ ++K   + N +G+   +  ++++QI S+F+R P  + SSM+GLE + G  +DF F DYL DP  SE+  P  +
Subjt:  LQGVKSDLVG-SHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDM

Query:  HHGMEVRLGLS
        H  ME RLG++
Subjt:  HHGMEVRLGLS

Q9CQT5 Proteasome maturation protein2.3e-1136.21Show/hide
Query:  NDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESES
        +D LR G   VK++L+ SHP+E   +  +   ++M    L N  G   PLK+ ++ + + +  R P  +PSS L L+ L G+ +  GFED LNDP +SE 
Subjt:  NDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESES

Query:  LRPLDMHHGMEVRLGL
        +   + H  +E +LGL
Subjt:  LRPLDMHHGMEVRLGL

Q9Y244 Proteasome maturation protein2.3e-1136.21Show/hide
Query:  NDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESES
        +D LR G   VK++L+ SHP+E   +  +   ++M    L N  G   PLK+ ++ + + + QR P  + SS L L+ L G+ +  GFED LNDP +SE 
Subjt:  NDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESES

Query:  LRPLDMHHGMEVRLGL
        +   + H  +E +LGL
Subjt:  LRPLDMHHGMEVRLGL

Arabidopsis top hitse value%identityAlignment
AT1G62920.1 CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR008012)8.3e-0946.48Show/hide
Query:  AFPLKMDLDRQILSRF------------------------QRPPGAIPSSMLGLEALTGSLDDFGFEDYLN
        A PLKMDLDR IL R+                         RP G IPS ML LE  TG++DDF FEDYLN
Subjt:  AFPLKMDLDRQILSRF------------------------QRPPGAIPSSMLGLEALTGSLDDFGFEDYLN

AT1G67250.1 Proteasome maturation factor UMP17.9e-6070.92Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        MES K IAHEIGG++NDALRFGL GVKS+++GSHP+ES YE+ +++ E +KR ++ + YG+A PLKMD+DRQILSRFQRPPG IPSSMLGLE  TG++DD
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPR+SE+ +P+D HHGMEVRLG+SKGP+ PSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

AT5G38650.1 Proteasome maturation factor UMP11.9e-6175.18Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        MES K IAHEIGG++NDALRFGL GVKSD++ SHP+E+ YE+ +++ EEMKR+++ +TYG+A PLKMDLDRQILSRFQRPPG IPSSMLGLE  TG+LD+
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPRESE+L+P+D HHGMEVRLGLSKGP  PSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

AT5G38660.2 acclimation of photosynthesis to environment1.9e-6175.18Show/hide
Query:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD
        MES K IAHEIGG++NDALRFGL GVKSD++ SHP+E+ YE+ +++ EEMKR+++ +TYG+A PLKMDLDRQILSRFQRPPG IPSSMLGLE  TG+LD+
Subjt:  MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDD

Query:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
        FGFEDYLNDPRESE+L+P+D HHGMEVRLGLSKGP  PSFM
Subjt:  FGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTTCGAAGACGATAGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTCGGTCTTCAAGGCGTTAAGAGCGACCTCGTCGGATCTCATCCTGTCGA
ATCCCTTTACGAAACTACAAGGAGAACAGACGAGGAGATGAAGAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAAATGGATTTGGACAGGCAAATTC
TTTCTCGATTTCAGAGGCCTCCAGGAGCTATTCCATCTTCCATGCTGGGTTTGGAGGCTCTTACAGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCA
AGAGAGAGTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAGGTCCGCCTTGGGCTGTCCAAAGGACCAGTTTGCCCAAGTTTCATG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTTCGAAGACGATAGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTCGGTCTTCAAGGCGTTAAGAGCGACCTCGTCGGATCTCATCCTGTCGA
ATCCCTTTACGAAACTACAAGGAGAACAGACGAGGAGATGAAGAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAAATGGATTTGGACAGGCAAATTC
TTTCTCGATTTCAGAGGCCTCCAGGAGCTATTCCATCTTCCATGCTGGGTTTGGAGGCTCTTACAGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCA
AGAGAGAGTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAGGTCCGCCTTGGGCTGTCCAAAGGACCAGTTTGCCCAAGTTTCATG
Protein sequenceShow/hide protein sequence
MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDP
RESESLRPLDMHHGMEVRLGLSKGPVCPSFM