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MS003328 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003328
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCOX assembly mitochondrial protein
Genome locationscaffold234:2116123..2116485
RNA-Seq ExpressionMS003328
SyntenyMS003328
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR013892 - Cytochrome c oxidase biogenesis protein Cmc1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578501.1 hypothetical protein SDJN03_22949, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2692.42Show/hide
Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYAS+YAECAYGRTLSVV+KCR+QAKELN+CLH
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
XP_008459466.1 PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo]1.1e-2692.42Show/hide
Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYAS+YAECAYGRTLSV++KCR+QAKELN+CLH
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
XP_010692765.1 PREDICTED: uncharacterized protein DDB_G0275933 [Beta vulgaris subsp. vulgaris]8.7e-2793.94Show/hide
Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
        MGYIQEARENHVKKKVEEALRSKMKQKALKECD YA++YAECAYGRTLSVVWKCR QAKELNSCLH
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
XP_022133533.1 uncharacterized protein DDB_G0275933 [Momordica charantia]5.4e-29100Show/hide
Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
XP_022938373.1 uncharacterized protein DDB_G0275933 [Cucurbita moschata]1.5e-2692.42Show/hide
Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYAS+YAECAYGRTLSVV+KCR+QAKELN+CLH
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
TrEMBL top hitse value%identityAlignment
A0A1S3CA82 COX assembly mitochondrial protein5.5e-2792.42Show/hide
Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYAS+YAECAYGRTLSV++KCR+QAKELN+CLH
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
A0A6J1BW91 COX assembly mitochondrial protein2.6e-29100Show/hide
Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
        MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
A0A6J1FIP8 COX assembly mitochondrial protein7.2e-2792.42Show/hide
Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYAS+YAECAYGRTLSVV+KCR+QAKELN+CLH
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
A0A6J1K100 COX assembly mitochondrial protein7.2e-2792.42Show/hide
Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
        MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYAS+YAECAYGRTLSVV+KCR+QAKELN+CLH
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
A0A6P3ZNL2 COX assembly mitochondrial protein7.2e-2792.42Show/hide
Query:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
        MGY+QEARENHVKKKVEEALRSKMKQKALKECDHYAS+YAECA GRTLSVVWKCR+QAKELN CLH
Subjt:  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
SwissProt top hitse value%identityAlignment
Q552P9 Uncharacterized protein DDB_G02759333.3e-0538Show/hide
Query:  VEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCL
        V+  LR K+K ++LKEC  + + +A+C+  + +SVVW+CR   + + +CL
Subjt:  VEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCL
Arabidopsis top hitse value%identityAlignment
AT5G16060.1 Cytochrome c oxidase biogenesis protein Cmc1-like5.6e-2476.56Show/hide
Query:  YIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH
        Y+++ARENHVKKKVEEALRSKMK KAL ECD Y S+YA+CA GRT SVVW CR QA+ELN+CLH
Subjt:  YIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTACATACAGGAAGCGCGAGAGAATCATGTGAAGAAGAAAGTAGAAGAAGCTCTGCGCAGCAAAATGAAGCAGAAGGCGTTGAAGGAGTGCGATCATTACGCTTC
CAGATATGCGGAATGCGCTTATGGCAGAACGTTATCCGTCGTCTGGAAATGTCGCAGTCAAGCTAAAGAATTGAACAGTTGCCTTCAT
mRNA sequenceShow/hide mRNA sequence
ATGGGTTACATACAGGAAGCGCGAGAGAATCATGTGAAGAAGAAAGTAGAAGAAGCTCTGCGCAGCAAAATGAAGCAGAAGGCGTTGAAGGAGTGCGATCATTACGCTTC
CAGATATGCGGAATGCGCTTATGGCAGAACGTTATCCGTCGTCTGGAAATGTCGCAGTCAAGCTAAAGAATTGAACAGTTGCCTTCAT
Protein sequenceShow/hide protein sequence
MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASRYAECAYGRTLSVVWKCRSQAKELNSCLH