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MS003331 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003331
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionrelated to AP2 12
Genome locationscaffold234:2135059..2135124
RNA-Seq ExpressionMS003331
SyntenyMS003331
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G53910.1 related to AP2 121.6e-0475Show/hide
Query:  RKSKYKGILQRPWGKWVAEI
        RK++Y+GI QRPWGKW AEI
Subjt:  RKSKYKGILQRPWGKWVAEI
AT1G53910.2 related to AP2 121.6e-0475Show/hide
Query:  RKSKYKGILQRPWGKWVAEI
        RK++Y+GI QRPWGKW AEI
Subjt:  RKSKYKGILQRPWGKWVAEI
AT1G53910.3 related to AP2 121.6e-0475Show/hide
Query:  RKSKYKGILQRPWGKWVAEI
        RK++Y+GI QRPWGKW AEI
Subjt:  RKSKYKGILQRPWGKWVAEI
AT3G14230.1 related to AP2 21.6e-0475Show/hide
Query:  RKSKYKGILQRPWGKWVAEI
        RK++Y+GI QRPWGKW AEI
Subjt:  RKSKYKGILQRPWGKWVAEI
AT3G14230.2 related to AP2 21.6e-0475Show/hide
Query:  RKSKYKGILQRPWGKWVAEI
        RK++Y+GI QRPWGKW AEI
Subjt:  RKSKYKGILQRPWGKWVAEI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGTTCGCAAAAGCAAGTACAAAGGTATCCTGCAGCGGCCATGGGGGAAATGGGTGGCAGAGATT
mRNA sequenceShow/hide mRNA sequence
AAAGTTCGCAAAAGCAAGTACAAAGGTATCCTGCAGCGGCCATGGGGGAAATGGGTGGCAGAGATT
Protein sequenceShow/hide protein sequence
KVRKSKYKGILQRPWGKWVAEI