; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003343 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003343
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprogrammed cell death protein 2-like
Genome locationscaffold234:2246435..2246602
RNA-Seq ExpressionMS003343
SyntenyMS003343
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007320 - Programmed cell death protein 2, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578489.1 Programmed cell death protein 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1787.27Show/hide
Query:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
        FRYSYGGKPIL RAEDGEAGKC+AC G R FEMQLMPPLLY LQEAADE QKQLL
Subjt:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
KAG7016054.1 Programmed cell death protein 2-like protein [Cucurbita argyrosperma subsp. argyrosperma]5.1e-1787.27Show/hide
Query:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
        FRYSYGGKPIL RAEDGEAGKC+AC G R FEMQLMPPLLY LQEAADE QKQLL
Subjt:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
XP_022133733.1 programmed cell death protein 2-like [Momordica charantia]2.1e-1890.91Show/hide
Query:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
        FRYSYGGKPILGRAEDGEAGKCRAC G RHFEMQLMPPLLY LQE ADE QKQLL
Subjt:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
XP_022993020.1 programmed cell death protein 2-like [Cucurbita maxima]5.1e-1787.27Show/hide
Query:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
        FRYSYGGKPIL RAEDGEAGKC+AC G R FEMQLMPPLLY LQEAADE QKQLL
Subjt:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
XP_023551278.1 programmed cell death protein 2-like [Cucurbita pepo subsp. pepo]5.1e-1787.27Show/hide
Query:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
        FRYSYGGKPIL RAEDGEAGKC+AC G R FEMQLMPPLLY LQEAADE QKQLL
Subjt:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
TrEMBL top hitse value%identityAlignment
A0A1S3CIF5 programmed cell death protein 2-like1.6e-1683.64Show/hide
Query:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
        FRYS+GGKPIL R+EDGEAGKC+AC G R FEMQLMPPLLY LQEAADE QKQLL
Subjt:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
A0A5A7TXN8 Programmed cell death protein 2-like1.6e-1683.64Show/hide
Query:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
        FRYS+GGKPIL R+EDGEAGKC+AC G R FEMQLMPPLLY LQEAADE QKQLL
Subjt:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
A0A6J1C014 programmed cell death protein 2-like1.0e-1890.91Show/hide
Query:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
        FRYSYGGKPILGRAEDGEAGKCRAC G RHFEMQLMPPLLY LQE ADE QKQLL
Subjt:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
A0A6J1FH69 programmed cell death protein 2-like9.4e-1785.45Show/hide
Query:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
        FR+SYGGKPIL RAEDGEAGKC+AC G R FEMQLMPPLLY LQEAADE QKQLL
Subjt:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
A0A6J1JRL2 programmed cell death protein 2-like2.5e-1787.27Show/hide
Query:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
        FRYSYGGKPIL RAEDGEAGKC+AC G R FEMQLMPPLLY LQEAADE QKQLL
Subjt:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQEAADELQKQLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G64830.1 programmed cell death 2 C-terminal domain-containing protein9.3e-0960Show/hide
Query:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQE
        FRY YGGKPIL   +     KCR C   RHFE+QLMPPL+Y L E
Subjt:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQE
AT5G64830.2 programmed cell death 2 C-terminal domain-containing protein9.3e-0960Show/hide
Query:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQE
        FRY YGGKPIL   +     KCR C   RHFE+QLMPPL+Y L E
Subjt:  FRYSYGGKPILGRAEDGEAGKCRAC-GIRHFEMQLMPPLLYVLQE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCAGATACTCTTATGGTGGGAAGCCAATTTTGGGTAGAGCAGAGGATGGAGAAGCTGGGAAGTGCAGGGCATGTGGTATAAGGCACTTTGAAATGCAGCTAATGCCCCC
ACTGCTATACGTTCTGCAGGAAGCAGCTGATGAACTTCAAAAACAGTTGCTG
mRNA sequenceShow/hide mRNA sequence
TTCAGATACTCTTATGGTGGGAAGCCAATTTTGGGTAGAGCAGAGGATGGAGAAGCTGGGAAGTGCAGGGCATGTGGTATAAGGCACTTTGAAATGCAGCTAATGCCCCC
ACTGCTATACGTTCTGCAGGAAGCAGCTGATGAACTTCAAAAACAGTTGCTG
Protein sequenceShow/hide protein sequence
FRYSYGGKPILGRAEDGEAGKCRACGIRHFEMQLMPPLLYVLQEAADELQKQLL