; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003354 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003354
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-H2 finger protein ATL74
Genome locationscaffold234:2312260..2312859
RNA-Seq ExpressionMS003354
SyntenyMS003354
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052006.1 RING-H2 finger protein ATL72 [Cucumis melo var. makuwa]5.6e-9388.5Show/hide
Query:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP
        M  +HHR R HRLLLD D TA PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFET GGT++RL A+GLKKSALRQIP
Subjt:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS
        VAVYGSE+GLEIRETDCPICLGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL+EQQS SESA AEAGNRPAGNSSA GQGEISITVDEI+
Subjt:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS

KAG7016045.1 RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-9186Show/hide
Query:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP
        MV DHHR RPHRLLLD + T  PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRF+FET GGT++RLAATGLKKSALR++P
Subjt:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS
        V VYGSESGL IRETDCPICLGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL EQQS SES  A+AGNRPAGNSSA GQGEISI +D+IS
Subjt:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS

XP_022134542.1 RING-H2 finger protein ATL74 [Momordica charantia]3.6e-10098.42Show/hide
Query:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP
        M  DHHRHRPHR LLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP
Subjt:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQG
        VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQG
Subjt:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQG

XP_022938777.1 RING-H2 finger protein ATL74-like [Cucurbita moschata]5.2e-9185.5Show/hide
Query:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP
        MV DHHR RPHRLLLD + T  PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGLNSIVRCA RCSRRF+FET GGT++RLAATGLKKSALR++P
Subjt:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS
        V VYGSESGL IRETDCPICLGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL EQQS SES  A+AGNRPAGNSSA GQGEISI +D+IS
Subjt:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS

XP_023550807.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]1.8e-9186Show/hide
Query:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP
        MV DHHR RPHRLLLD + T  PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRF+FET GGT++RLAATGLKKSALR++P
Subjt:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS
        V VYGSESGL IRETDCPICLGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL EQQS SES  A+AGNRPAGNSSA GQGEISI +D+IS
Subjt:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS

TrEMBL top hitse value%identityAlignment
A0A0A0KAH2 RING-type domain-containing protein1.3e-9288Show/hide
Query:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP
        M  +HHR RP RLLLD D TAPPSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFET GGT++RL ATGLKKSALRQIP
Subjt:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS
        VAVYGSE+GLEIRETDCPICLGDF+AGEKIK+LPKCNH FHVRCIDTWLASHSSCPTCRQSLLEQQS SESAV EAGNR AGNSSA GQGEISITVD I+
Subjt:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS

A0A5D3BXT6 RING-H2 finger protein ATL722.7e-9388.5Show/hide
Query:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP
        M  +HHR R HRLLLD D TA PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFET GGT++RL A+GLKKSALRQIP
Subjt:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS
        VAVYGSE+GLEIRETDCPICLGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL+EQQS SESA AEAGNRPAGNSSA GQGEISITVDEI+
Subjt:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS

A0A6J1BZW4 RING-H2 finger protein ATL741.7e-10098.42Show/hide
Query:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP
        M  DHHRHRPHR LLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP
Subjt:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQG
        VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQG
Subjt:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQG

A0A6J1FF16 RING-H2 finger protein ATL74-like2.5e-9185.5Show/hide
Query:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP
        MV DHHR RPHRLLLD + T  PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGLNSIVRCA RCSRRF+FET GGT++RLAATGLKKSALR++P
Subjt:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS
        V VYGSESGL IRETDCPICLGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL EQQS SES  A+AGNRPAGNSSA GQGEISI +D+IS
Subjt:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS

A0A6J1JVF4 RING-H2 finger protein ATL74-like3.3e-9185.5Show/hide
Query:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP
        MV DHHR RPHRLLLD + T  PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRF+FET GGT++RLAATGLKKSALR++P
Subjt:  MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIP

Query:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS
        V VYGSESGL IRETDCPICLGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL EQQS SES  A+AGNRPAGN SA GQGEISI +D+IS
Subjt:  VAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL109.1e-3047.76Show/hide
Query:  SNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFE--TAGGTSTRLAAT-GLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKI
        ++E N   N++++L+ L+C +IC LGL+ I+RCALR S RF         +STR ++  G+KK ALR  PV  Y  E  L   + +C ICL DF++GE++
Subjt:  SNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFE--TAGGTSTRLAAT-GLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKI

Query:  KVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLE
        ++LPKCNH FHVRCID WL  H +CP CR  L+E
Subjt:  KVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLE

Q6NQG7 RING-H2 finger protein ATL783.8e-3646.71Show/hide
Query:  SSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGT-STRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEK
        S Y  + NFD N+V++L+ LLCAL+C+LGLNSI+RCALRCS     E  G     RL  TG+K+ AL+      Y +E  L   +T+C ICL +F+A E+
Subjt:  SSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGT-STRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEK

Query:  IKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITV
        +K+LP C+H FHVRCID WL+SHSSCPTCR  L+  Q+C +  +A+     + NS+   Q  I + +
Subjt:  IKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITV

Q9FLC6 RING-H2 finger protein ATL736.1e-4262.04Show/hide
Query:  SSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKI
        S+  N A+ DT+MVIILAALLCALICALG+NS++RC LRC+RRF        +    A G+KK AL+ IPV  Y  E  L+++ T+C ICLGDF+ GE +
Subjt:  SSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKI

Query:  KVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQS
        +VLPKCNH FHV+CIDTWL SHSSCPTCRQSLLE Q+
Subjt:  KVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQS

Q9LZV8 RING-H2 finger protein ATL743.9e-4155.84Show/hide
Query:  HRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGL
        HRLLL+       ++G+     Y+ + NFD NMVIILAALLCALI ALGLNSI+RCA+RC    +   A GT    A  GLKK  L++ PVA YGS   +
Subjt:  HRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGL

Query:  EIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLE
        +I  T+C ICLG+F  GE+++VLP CNH FH+ CIDTWL SHSSCP CR SL+E
Subjt:  EIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLE

Q9SG96 RING-H2 finger protein ATL722.9e-4461.35Show/hide
Query:  RLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFE-------TAGGTSTRL-AATGLKKSALRQIPVAV
        RLLL+  A A P+N N       N+  FDTNMVIILAALLCALICAL LNS +RC LR +RRF  +        A     RL AATGLKK AL+QIPV +
Subjt:  RLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFE-------TAGGTSTRL-AATGLKKSALRQIPVAV

Query:  YGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQ
        YGS   ++++ T+C ICLGDF  GEK++VLPKCNH FHVRCIDTWL S SSCPTCRQSLL +Q
Subjt:  YGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQ

Arabidopsis top hitse value%identityAlignment
AT1G49220.1 RING/U-box superfamily protein6.4e-3147.76Show/hide
Query:  SNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFE--TAGGTSTRLAAT-GLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKI
        ++E N   N++++L+ L+C +IC LGL+ I+RCALR S RF         +STR ++  G+KK ALR  PV  Y  E  L   + +C ICL DF++GE++
Subjt:  SNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFE--TAGGTSTRLAAT-GLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKI

Query:  KVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLE
        ++LPKCNH FHVRCID WL  H +CP CR  L+E
Subjt:  KVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLE

AT1G49230.1 RING/U-box superfamily protein2.7e-3746.71Show/hide
Query:  SSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGT-STRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEK
        S Y  + NFD N+V++L+ LLCAL+C+LGLNSI+RCALRCS     E  G     RL  TG+K+ AL+      Y +E  L   +T+C ICL +F+A E+
Subjt:  SSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGT-STRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEK

Query:  IKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITV
        +K+LP C+H FHVRCID WL+SHSSCPTCR  L+  Q+C +  +A+     + NS+   Q  I + +
Subjt:  IKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITV

AT3G10910.1 RING/U-box superfamily protein2.1e-4561.35Show/hide
Query:  RLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFE-------TAGGTSTRL-AATGLKKSALRQIPVAV
        RLLL+  A A P+N N       N+  FDTNMVIILAALLCALICAL LNS +RC LR +RRF  +        A     RL AATGLKK AL+QIPV +
Subjt:  RLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFE-------TAGGTSTRL-AATGLKKSALRQIPVAV

Query:  YGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQ
        YGS   ++++ T+C ICLGDF  GEK++VLPKCNH FHVRCIDTWL S SSCPTCRQSLL +Q
Subjt:  YGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQ

AT5G01880.1 RING/U-box superfamily protein2.8e-4255.84Show/hide
Query:  HRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGL
        HRLLL+       ++G+     Y+ + NFD NMVIILAALLCALI ALGLNSI+RCA+RC    +   A GT    A  GLKK  L++ PVA YGS   +
Subjt:  HRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGL

Query:  EIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLE
        +I  T+C ICLG+F  GE+++VLP CNH FH+ CIDTWL SHSSCP CR SL+E
Subjt:  EIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLE

AT5G05280.1 RING/U-box superfamily protein4.3e-4362.04Show/hide
Query:  SSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKI
        S+  N A+ DT+MVIILAALLCALICALG+NS++RC LRC+RRF        +    A G+KK AL+ IPV  Y  E  L+++ T+C ICLGDF+ GE +
Subjt:  SSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKI

Query:  KVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQS
        +VLPKCNH FHV+CIDTWL SHSSCPTCRQSLLE Q+
Subjt:  KVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTCGATCACCACCGTCACCGTCCCCACCGCCTCCTCCTCGACGGCGACGCGACGGCGCCGCCGTCGAATGGAAACAGAACGCGAAGTTCGTACAGCAACGAAGC
GAATTTCGACACGAATATGGTGATAATCCTCGCGGCGTTACTCTGCGCGCTGATTTGCGCTCTCGGACTGAATTCGATCGTCCGCTGCGCCCTCCGCTGCAGCCGGCGGT
TCGCCTTCGAGACGGCCGGCGGCACATCCACGCGCCTCGCCGCCACGGGGCTGAAGAAAAGCGCATTACGCCAAATTCCGGTGGCCGTGTACGGGTCGGAGTCTGGTCTA
GAGATCCGAGAAACGGACTGCCCTATCTGCTTGGGAGATTTCATCGCCGGCGAGAAAATCAAAGTTCTGCCCAAATGTAACCACGAGTTTCACGTACGATGTATCGACAC
GTGGTTGGCTTCCCACTCGTCTTGTCCGACATGTCGTCAGTCGCTGCTCGAACAACAGTCGTGTTCTGAATCGGCGGTAGCTGAAGCCGGAAACCGACCCGCCGGAAATT
CGTCGGCCGGCGGCCAAGGTGAGATCTCGATTACTGTAGATGAAATTAGC
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTCGATCACCACCGTCACCGTCCCCACCGCCTCCTCCTCGACGGCGACGCGACGGCGCCGCCGTCGAATGGAAACAGAACGCGAAGTTCGTACAGCAACGAAGC
GAATTTCGACACGAATATGGTGATAATCCTCGCGGCGTTACTCTGCGCGCTGATTTGCGCTCTCGGACTGAATTCGATCGTCCGCTGCGCCCTCCGCTGCAGCCGGCGGT
TCGCCTTCGAGACGGCCGGCGGCACATCCACGCGCCTCGCCGCCACGGGGCTGAAGAAAAGCGCATTACGCCAAATTCCGGTGGCCGTGTACGGGTCGGAGTCTGGTCTA
GAGATCCGAGAAACGGACTGCCCTATCTGCTTGGGAGATTTCATCGCCGGCGAGAAAATCAAAGTTCTGCCCAAATGTAACCACGAGTTTCACGTACGATGTATCGACAC
GTGGTTGGCTTCCCACTCGTCTTGTCCGACATGTCGTCAGTCGCTGCTCGAACAACAGTCGTGTTCTGAATCGGCGGTAGCTGAAGCCGGAAACCGACCCGCCGGAAATT
CGTCGGCCGGCGGCCAAGGTGAGATCTCGATTACTGTAGATGAAATTAGC
Protein sequenceShow/hide protein sequence
MVFDHHRHRPHRLLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGL
EIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS