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MS003358 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003358
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold234:2338374..2338607
RNA-Seq ExpressionMS003358
SyntenyMS003358
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4392836.1 hypothetical protein GLYMA_04G221450v4 [Glycine max]1.8e-0751.9Show/hide
Query:  MAKPSHVAQIFLVFALLLSLSGSSSSAR--LLPEPELNLALPADPAAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFN
        MAK  H+A + L+  LLL+ S S+S+       EP LNLALP+D   A   KYGP++L  LPKG +P SGPSKGTN+ N
Subjt:  MAKPSHVAQIFLVFALLLSLSGSSSSAR--LLPEPELNLALPADPAAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFN

KAG5035975.1 hypothetical protein JHK87_010885 [Glycine soja]1.8e-0751.9Show/hide
Query:  MAKPSHVAQIFLVFALLLSLSGSSSSAR--LLPEPELNLALPADPAAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFN
        MAK  H+A + L+  LLL+ S S+S+       EP LNLALP+D   A   KYGP++L  LPKG +P SGPSKGTN+ N
Subjt:  MAKPSHVAQIFLVFALLLSLSGSSSSAR--LLPEPELNLALPADPAAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFN

KAG6578478.1 hypothetical protein SDJN03_22926, partial [Cucurbita argyrosperma subsp. sororia]8.1e-1664.2Show/hide
Query:  MAKPSHVAQIFLVFALLLSLSGSSSSARLLPEPELNLALP---ADPAAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFNT
        MAK   V ++F VFA++L +S SSSSARLL +  L+ A+P    D  AALSR+YGPL+LGFLPKG IP SGPSKGTNDFNT
Subjt:  MAKPSHVAQIFLVFALLLSLSGSSSSARLLPEPELNLALP---ADPAAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFNT

KAG6602588.1 hypothetical protein SDJN03_07821, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1054.02Show/hide
Query:  MAKPSHVAQIFLVFALLLSLS-GSSSSARLLPE--------PELNLALPADPAAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFNT
        MA    +++   V AL+LSLS  SSSSARLL +        P+L L  PAD   AL+ +YG LLLGFLPKG IP SGPSKGTN+ N+
Subjt:  MAKPSHVAQIFLVFALLLSLS-GSSSSARLLPE--------PELNLALPADPAAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFNT

KGN45830.1 hypothetical protein Csa_005505 [Cucumis sativus]1.8e-1061.64Show/hide
Query:  FLVFALLLSLSGSSSSARLLPE----PELNLALPADPAAALSRKYGPLLLGFLPK-GAIPSSGPSKGTNDFNT
        F +F L+L +S SSSSARLL +    P L L +PADPAA    +Y  LLLGFLPK G+IP SGPSKGTN+FNT
Subjt:  FLVFALLLSLSGSSSSARLLPE----PELNLALPADPAAALSRKYGPLLLGFLPK-GAIPSSGPSKGTNDFNT

TrEMBL top hitse value%identityAlignment
A0A072V2H1 Uncharacterized protein9.1e-0542.05Show/hide
Query:  QIFLVFALLLSLSGSSSSARLLPE-----PELNLALPADPA--------------AALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFN
        Q+ +   +LLSL  SSSSAR L +        N+ALP++ A                 ++ YGPL+L  LPKG +PSSGPSKGTN+ N
Subjt:  QIFLVFALLLSLSGSSSSARLLPE-----PELNLALPADPA--------------AALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFN

A0A0A0K7U2 Uncharacterized protein8.5e-1161.64Show/hide
Query:  FLVFALLLSLSGSSSSARLLPE----PELNLALPADPAAALSRKYGPLLLGFLPK-GAIPSSGPSKGTNDFNT
        F +F L+L +S SSSSARLL +    P L L +PADPAA    +Y  LLLGFLPK G+IP SGPSKGTN+FNT
Subjt:  FLVFALLLSLSGSSSSARLLPE----PELNLALPADPAAALSRKYGPLLLGFLPK-GAIPSSGPSKGTNDFNT

A0A151RAC1 Uncharacterized protein1.8e-0538.83Show/hide
Query:  HVAQIFLVFALLLSLSGSSSS-------ARLLPEPELNLALPADPAAAL------------------------SRKYGPLLLGFLPKGAIPSSGPSKGTN
        H+A + L+F LL + S S +             EP LNLALP+D   A                           KYGPL+L  LPKG +P SGPSKGTN
Subjt:  HVAQIFLVFALLLSLSGSSSS-------ARLLPEPELNLALPADPAAAL------------------------SRKYGPLLLGFLPKGAIPSSGPSKGTN

Query:  DFN
        DFN
Subjt:  DFN

A0A396J0C5 Uncharacterized protein9.1e-0542.05Show/hide
Query:  QIFLVFALLLSLSGSSSSARLLPE-----PELNLALPADPA--------------AALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFN
        Q+ +   +LLSL  SSSSAR L +        N+ALP++ A                 ++ YGPL+L  LPKG +PSSGPSKGTN+ N
Subjt:  QIFLVFALLLSLSGSSSSARLLPE-----PELNLALPADPA--------------AALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFN

M5XE75 Uncharacterized protein2.0e-0466.67Show/hide
Query:  LPADP--AAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFNT
        LPA P   AA + KYGPL+L  LPKG  P SGPSKGTND NT
Subjt:  LPADP--AAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G05300.1 unknown protein5.8e-0447.5Show/hide
Query:  LPADPAAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFNT
        L A  ++ ++ K+G L+L  LPKG++P+SGPSK  ND  T
Subjt:  LPADPAAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGCCGTCCCACGTGGCACAAATCTTCCTCGTCTTTGCCCTCCTTCTCTCCCTCTCTGGCTCGTCCTCGTCGGCCAGATTGCTCCCGGAGCCGGAGTTGAATCT
GGCTCTTCCGGCGGATCCGGCGGCGGCGCTGTCCCGGAAGTATGGGCCTCTGCTTCTGGGTTTTCTGCCCAAGGGGGCGATTCCGTCGTCGGGGCCGAGCAAAGGAACCA
ACGACTTCAACACC
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGCCGTCCCACGTGGCACAAATCTTCCTCGTCTTTGCCCTCCTTCTCTCCCTCTCTGGCTCGTCCTCGTCGGCCAGATTGCTCCCGGAGCCGGAGTTGAATCT
GGCTCTTCCGGCGGATCCGGCGGCGGCGCTGTCCCGGAAGTATGGGCCTCTGCTTCTGGGTTTTCTGCCCAAGGGGGCGATTCCGTCGTCGGGGCCGAGCAAAGGAACCA
ACGACTTCAACACC
Protein sequenceShow/hide protein sequence
MAKPSHVAQIFLVFALLLSLSGSSSSARLLPEPELNLALPADPAAALSRKYGPLLLGFLPKGAIPSSGPSKGTNDFNT