CuGenDBv2

Gene ID	MS003369
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	HIG1 domain-containing protein
Genome location	scaffold234:2391674..2392227
RNA-Seq Expression	MS003369
Synteny	MS003369
Gene Ontology terms	GO:0033617 - mitochondrial respiratory chain complex IV assembly (biological process) GO:0005746 - mitochondrial respirasome (cellular component) GO:0031305 - integral component of mitochondrial inner membrane (cellular component)
InterPro domains	IPR007667 - Hypoxia induced protein, domain IPR040153 - Respiratory supercomplex factor 2, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052029.1 respiratory supercomplex factor 2-like protein [Cucumis melo var. makuwa]

1.1e-28

87.01

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Query:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE
        MEAIQ+WVS+HKLT+IGALWASG+GASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+ K   DR E
Subjt:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE

KAG6578469.1 hypothetical protein SDJN03_22917, partial [Cucurbita argyrosperma subsp. sororia]

7.5e-30

92.21

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Query:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE
        MEAIQ+WVSQHKLTSIGALWASGIGASLAYTRS TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE K+AG R E
Subjt:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE

KAG7016034.1 BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.5e-30

92.21

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Query:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE
        MEAIQ+WVSQHKLTSIGALWASGIGASLAYTRS TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE K+AG R E
Subjt:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE

XP_004138401.1 uncharacterized protein LOC101218681 [Cucumis sativus]

6.3e-29

88.31

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Query:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE
        MEAIQ+WVS+HKLT+IGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+ K   DR E
Subjt:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE

XP_038886475.1 uncharacterized protein LOC120076661 [Benincasa hispida]

3.1e-28

89.61

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Query:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE
        MEAIQ WVS+HKLT+IGALWASGIGASLAYTRSRT LKPSLRLIHARMHAQALTLAVLSGAAVYHYYE K AG R E
Subjt:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7T4 HIG1 domain-containing protein

3.1e-29

88.31

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Query:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE
        MEAIQ+WVS+HKLT+IGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+ K   DR E
Subjt:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE

A0A2R6RWM7 HIG1 domain family member 1B like

1.9e-26

81.82

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Query:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE
        MEA+QSWVSQHKLTSIG +W S IGASLAY+R++TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEK+  G++ E
Subjt:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE

A0A5A7UEZ1 Respiratory supercomplex factor 2-like protein

5.2e-29

87.01

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Query:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE
        MEAIQ+WVS+HKLT+IGALWASG+GASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY+ K   DR E
Subjt:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE

A0A5J5AU49 HIG1 domain-containing protein

1.4e-26

87.32

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Query:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKA
        MEA+QSWVS+HKLTSIG LWAS IGASLAY+R++TPLKPSLRLIHARMHAQALTLAVLSGAA YHYYEK+A
Subjt:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKA

A0A7J7I509 HIG1 domain-containing protein

2.9e-27

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Query:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKK
        MEA+QSWVS+HKLTSIG LWASGIGASLAY+R++TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEK+
Subjt:  MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G05550.1 Hypoxia-responsive family protein

2.7e-17

57.97

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Query:  EAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKK
        E I+ WVS HKL ++G LW SGI  S+AY  S+  +K S+++IHAR+HAQALTLA L+GAAV  YY+ K
Subjt:  EAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKK

AT5G27760.1 Hypoxia-responsive family protein

1.0e-16

54.79

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Query:  IQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE-KKAAGDR
        I+ W+ +HKL ++G LW SGI  S+AY  S+  +K S+R+IHAR+HAQALTLA L+GAA   YY+ K  A DR
Subjt:  IQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE-KKAAGDR

Sequences

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CDS sequence

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ATGGAAGCAATTCAATCCTGGGTTTCTCAGCACAAACTCACCAGCATTGGAGCGCTATGGGCATCTGGGATCGGAGCATCACTGGCGTACACCCGATCGAGGACTCCCCT
GAAGCCAAGTCTCCGGCTTATACATGCCAGGATGCATGCTCAGGCATTGACGTTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGAGAAGAAAGCCGCCGGCG
ACCGACCGGAG

mRNA sequence

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Protein sequence

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MEAIQSWVSQHKLTSIGALWASGIGASLAYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKKAAGDRPE

MS003369 (gene) of Bitter gourd (TR) v1 genome