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MS003375 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003375
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHMA domain-containing protein
Genome locationscaffold234:2431753..2432093
RNA-Seq ExpressionMS003375
SyntenyMS003375
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052042.1 superoxide dismutase 1 copper chaperone [Cucumis melo var. makuwa]9.6e-1853.15Show/hide
Query:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
        VVELKV LHC++CIKKILKAIKKIQ                                     DIETYNVD ++NKV VTGNVT EEVIKVL KI KTA+P
Subjt:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP

Query:  WQADEVNNQVN
        WQ DE+NN  N
Subjt:  WQADEVNNQVN

KAE8646572.1 hypothetical protein Csa_004951, partial [Cucumis sativus]5.6e-1855.56Show/hide
Query:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
        VVELKV LHCE+CIKKILKAIKKIQ                                     DIETYNVD ++NKV VTGNVT EEVIKVL KI KTAIP
Subjt:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP

Query:  WQADEVNN
        WQ DE+NN
Subjt:  WQADEVNN

XP_004138408.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucumis sativus]5.6e-1855.56Show/hide
Query:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
        VVELKV LHCE+CIKKILKAIKKIQ                                     DIETYNVD ++NKV VTGNVT EEVIKVL KI KTAIP
Subjt:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP

Query:  WQADEVNN
        WQ DE+NN
Subjt:  WQADEVNN

XP_015877508.1 heavy metal-associated isoprenylated plant protein 45 [Ziziphus jujuba]1.5e-1856.19Show/hide
Query:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
        VVELKVGLHC++CIKKILKAIKKIQ                                     DIETYNVDTQLNKVTVTGNVTTEEVIKV+HKI KTA  
Subjt:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP

Query:  WQADE
        W+A++
Subjt:  WQADE

XP_022133451.1 copper transport protein ATX1 [Momordica charantia]6.6e-2766.96Show/hide
Query:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
        VVELKVGLHCEDCIKKILKAIKKIQ                                     DIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
Subjt:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP

Query:  WQADEVNNQVNN
        WQADEVNNQVNN
Subjt:  WQADEVNNQVNN

TrEMBL top hitse value%identityAlignment
A0A0A0K8N1 HMA domain-containing protein2.7e-1855.56Show/hide
Query:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
        VVELKV LHCE+CIKKILKAIKKIQ                                     DIETYNVD ++NKV VTGNVT EEVIKVL KI KTAIP
Subjt:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP

Query:  WQADEVNN
        WQ DE+NN
Subjt:  WQADEVNN

A0A2P2IHW8 HMA domain-containing protein2.7e-1855.14Show/hide
Query:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
        VVELKVGLHCE+CIKKILKAIKKIQ                                     DIETY+VDTQL+KVTVTGNVTTEEVI+V+ KI KTA  
Subjt:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP

Query:  WQADEVN
        W ADE+N
Subjt:  WQADEVN

A0A5D3C2A2 Superoxide dismutase 1 copper chaperone4.6e-1853.15Show/hide
Query:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
        VVELKV LHC++CIKKILKAIKKIQ                                     DIETYNVD ++NKV VTGNVT EEVIKVL KI KTA+P
Subjt:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP

Query:  WQADEVNNQVN
        WQ DE+NN  N
Subjt:  WQADEVNNQVN

A0A6J1BV52 copper transport protein ATX13.2e-2766.96Show/hide
Query:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
        VVELKVGLHCEDCIKKILKAIKKIQ                                     DIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
Subjt:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP

Query:  WQADEVNNQVNN
        WQADEVNNQVNN
Subjt:  WQADEVNNQVNN

A0A6P3ZEH3 heavy metal-associated isoprenylated plant protein 457.1e-1956.19Show/hide
Query:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
        VVELKVGLHC++CIKKILKAIKKIQ                                     DIETYNVDTQLNKVTVTGNVTTEEVIKV+HKI KTA  
Subjt:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP

Query:  WQADE
        W+A++
Subjt:  WQADE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G06130.1 Heavy metal transport/detoxification superfamily protein6.4e-0427.78Show/hide
Query:  LKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIPWQA
        LKV +HC+ C +K+ K ++KI+G                                     + T  +D++  KVTV+G+V    +IK L K  K A  W A
Subjt:  LKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIPWQA

Query:  DEVNNQVN
         + NN  N
Subjt:  DEVNNQVN

AT3G06130.2 Heavy metal transport/detoxification superfamily protein6.4e-0427.78Show/hide
Query:  LKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIPWQA
        LKV +HC+ C +K+ K ++KI+G                                     + T  +D++  KVTV+G+V    +IK L K  K A  W A
Subjt:  LKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIPWQA

Query:  DEVNNQVN
         + NN  N
Subjt:  DEVNNQVN

AT3G56891.1 Heavy metal transport/detoxification superfamily protein2.9e-0427.72Show/hide
Query:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
        +VEL V + C+ C KK+ +AI K+ G                                     ++T  +D    KVTVTG V  EEV+K++ +  +TA  
Subjt:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP

Query:  W
        W
Subjt:  W

AT5G05365.1 Heavy metal transport/detoxification superfamily protein3.0e-1747.12Show/hide
Query:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP
        VVELKV LHC++CI+KILKAIKKI+                                     DIE Y+VDTQLNKVTVTGNVT E+VI+VL K+ K A+ 
Subjt:  VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIP

Query:  WQAD
        W  D
Subjt:  WQAD

AT5G27690.1 Heavy metal transport/detoxification superfamily protein3.8e-0429.36Show/hide
Query:  LKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIPWQA
        L+V +HCE C +KI K + KI G                                     + T N+D +  KVTV GNV  E +IK + K  + A  W  
Subjt:  LKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIPWQA

Query:  DEVNNQVNN
           NN +NN
Subjt:  DEVNNQVNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGGTGGAGTTGAAGGTGGGTTTGCACTGTGAGGACTGCATCAAGAAGATCCTCAAAGCCATCAAGAAAATCCAAGGTTGTATTCAATGTCTTCATCAATTTCTCCTCTG
CCTCTGGTTTAAATTTAATGAACAAAGCATTGAATCTTCTGTGTTCATTTTTTTTTGGGGGGGGGGACGATTTGCAGATATAGAGACATATAATGTAGATACGCAGCTGA
ACAAGGTGACTGTTACAGGCAATGTCACCACAGAAGAAGTCATCAAAGTGCTTCACAAAATTAGCAAAACTGCAATCCCTTGGCAAGCTGATGAAGTCAATAATCAAGTC
AACAAC
mRNA sequenceShow/hide mRNA sequence
GTGGTGGAGTTGAAGGTGGGTTTGCACTGTGAGGACTGCATCAAGAAGATCCTCAAAGCCATCAAGAAAATCCAAGGTTGTATTCAATGTCTTCATCAATTTCTCCTCTG
CCTCTGGTTTAAATTTAATGAACAAAGCATTGAATCTTCTGTGTTCATTTTTTTTTGGGGGGGGGGACGATTTGCAGATATAGAGACATATAATGTAGATACGCAGCTGA
ACAAGGTGACTGTTACAGGCAATGTCACCACAGAAGAAGTCATCAAAGTGCTTCACAAAATTAGCAAAACTGCAATCCCTTGGCAAGCTGATGAAGTCAATAATCAAGTC
AACAAC
Protein sequenceShow/hide protein sequence
VVELKVGLHCEDCIKKILKAIKKIQGCIQCLHQFLLCLWFKFNEQSIESSVFIFFWGGGRFADIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKTAIPWQADEVNNQV
NN