CuGenDBv2

Gene ID	MS003408
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	FAS1 domain-containing protein
Genome location	scaffold234:2689556..2690125
RNA-Seq Expression	MS003408
Synteny	MS003408
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR000782 - FAS1 domain IPR036378 - FAS1 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7016003.1 hypothetical protein SDJN02_21107 [Cucurbita argyrosperma subsp. argyrosperma]

3.3e-79

82.65

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Query:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVT-------RKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT
        MK+SFI+KNPIAF F ILS+CC+LIVLI+TLRLPELTVG  AV        RKVPKD KLGKFGEMMIKMLPKDLAFTVF+PSEKAF+RELSL+VNES T
Subjt:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVT-------RKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT

Query:  TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSE
        TEK DDTYAV+SR+LGFSAVPR IYS+ VDYG EISYDAVSGFTL ISKDRDGMLIVNRVRSE VDIKKKD++VHIMDGVIMDA FEQSVKPDDSE
Subjt:  TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSE

XP_022133527.1 uncharacterized protein LOC111006089 [Momordica charantia]

7.4e-95

98.95

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Query:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVTRKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFTTEKTDDT
        MKKSFIVKNPIAFGF ILSVCCILIVLISTLRLPELTVGVNAVTRKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFTTEKTDDT
Subjt:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVTRKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFTTEKTDDT

Query:  YAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED
        YAV+SRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED
Subjt:  YAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED

XP_022939922.1 uncharacterized protein LOC111445644 [Cucurbita moschata]

3.5e-81

84.26

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Query:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVT-------RKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT
        MK+SFI+KNPIAF F ILS+CCILIVLI+TLRLPELTVG  AV        RKVPKDDKLGKFGEMMIKMLPKDLAFTVF+PSEKAFERELSLQVNES T
Subjt:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVT-------RKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT

Query:  TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED
        TEK DDTY V+SR+LGFSAVPR IYS+ VDYG EISYDAVSGFTL ISKDRDGMLIVNRVRSE VDIKKKD++VHIMDGVIMDA FEQSVKPDDSED
Subjt:  TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED

XP_022993525.1 uncharacterized protein LOC111489506 [Cucurbita maxima]

1.5e-79

82.23

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Query:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVT-------RKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT
        MK+SFI+KNPIAF F ILS+CCILIVLI+TLRLPELTVG  AV        RK+PKDDKLGKFGEMMIKMLPKDLAFTVF+PSEKAFERELSL+VNES T
Subjt:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVT-------RKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT

Query:  TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED
        TEK DDTYAV+SR+LGFSAVPR IYS+ VDYG EISYDAVSGFTL ISKDRDGMLIVNRVRSE VD+KKKD++VH+MDGVIMDA FEQSVKPD SED
Subjt:  TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED

XP_023549508.1 uncharacterized protein LOC111807988 [Cucurbita pepo subsp. pepo]

3.0e-80

82.74

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Query:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVT-------RKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT
        MK+SFI+KNPIAF F ILS+CCILIVLI+TLRLPELTVG  AV        RKVPKD KLGKFGEMMIKMLPKDLAFTVF+PSEKAFERELSL+VNES T
Subjt:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVT-------RKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT

Query:  TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED
        TEK DDTYAV+SR+LGFSAVPR +YS+ VDYG EISYDAVSGFTL ISKD+DGMLIVNRVRSEMVD+KKKD++VHIMDGVIMDA FEQSVKPDDSED
Subjt:  TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K8H5 FAS1 domain-containing protein

1.7e-76

79.29

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Query:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNA-------VTRKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT
        MK+SFI+KNPIAF F ILS+CC+LIVLI+TLRLPELTVGV A       + RKV KDD+LGKFGEMMI+MLP+DLAFTVF+PSEKAFERELSL+VNESFT
Subjt:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNA-------VTRKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT

Query:  -TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED
         TEK DDTYAV+SR+LGFSAVPR IYS+LVDYG EI YDAVSGFTL ISKDR+G L+VN VRSEMVD+KKKD++VHIMDGVIMDA FEQSVKPDD+ED
Subjt:  -TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED

A0A1S3B3H1 uncharacterized protein LOC103485559

1.4e-75

78.79

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Query:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVN-------AVTRKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT
        MK+SFI+KNPIAF F ILS+CC+LIVLI+TLRLPELTVG         ++ RKV KD KLGKFGEMMI+MLP+DLAFTVF+PSEKAFERELSL+VNESFT
Subjt:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVN-------AVTRKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT

Query:  -TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED
         TEK DDTYAV+SR+LGFSAVPR IYS+LVDYG EISYDAVSGFTL ISKDRDG L+VN VRSEMVD+KKK ++VHIMDGVIMDA FEQSVKPDD+ED
Subjt:  -TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED

A0A6J1BWY4 uncharacterized protein LOC111006089

3.6e-95

98.95

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Query:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVTRKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFTTEKTDDT
        MKKSFIVKNPIAFGF ILSVCCILIVLISTLRLPELTVGVNAVTRKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFTTEKTDDT
Subjt:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVTRKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFTTEKTDDT

Query:  YAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED
        YAV+SRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED
Subjt:  YAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED

A0A6J1FI64 uncharacterized protein LOC111445644

1.7e-81

84.26

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Query:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVT-------RKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT
        MK+SFI+KNPIAF F ILS+CCILIVLI+TLRLPELTVG  AV        RKVPKDDKLGKFGEMMIKMLPKDLAFTVF+PSEKAFERELSLQVNES T
Subjt:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVT-------RKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT

Query:  TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED
        TEK DDTY V+SR+LGFSAVPR IYS+ VDYG EISYDAVSGFTL ISKDRDGMLIVNRVRSE VDIKKKD++VHIMDGVIMDA FEQSVKPDDSED
Subjt:  TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED

A0A6J1JYR8 uncharacterized protein LOC111489506

7.2e-80

82.23

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Query:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVT-------RKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT
        MK+SFI+KNPIAF F ILS+CCILIVLI+TLRLPELTVG  AV        RK+PKDDKLGKFGEMMIKMLPKDLAFTVF+PSEKAFERELSL+VNES T
Subjt:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVT-------RKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFT

Query:  TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED
        TEK DDTYAV+SR+LGFSAVPR IYS+ VDYG EISYDAVSGFTL ISKDRDGMLIVNRVRSE VD+KKKD++VH+MDGVIMDA FEQSVKPD SED
Subjt:  TEKTDDTYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G55820.1 Fasciclin-like arabinogalactan family protein

7.0e-35

43.07

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Query:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVTRKVPKD--DKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNES---FTTE
        MKK   +KNP+ F F +++V  + I++ S L+LPE  +      RK+  +  D+LG FG+MMI+MLP+DL FT FVPSEK+F R+L L++N S    + E
Subjt:  MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVTRKVPKD--DKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNES---FTTE

Query:  KTDD---TYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRD-GMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSV---KPDDS
        + DD   TYAV+SR++ F+ VP  +    +   +  SY+++SGFTL I + R+ G L+VN V +E + +K+  I+VHIM+GV+MD++F QS+    P D 
Subjt:  KTDD---TYAVLSRVLGFSAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRD-GMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSV---KPDDS

Query:  ED
        +D
Subjt:  ED

Sequences

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CDS sequence

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ATGAAGAAGAGCTTCATTGTAAAGAACCCAATTGCCTTTGGTTTTACGATTCTCTCTGTTTGTTGCATACTTATTGTACTCATCTCAACGCTAAGGCTTCCAGAGCTAAC
TGTAGGAGTTAATGCTGTTACCAGAAAGGTTCCGAAAGATGATAAGTTGGGCAAATTTGGGGAGATGATGATCAAAATGTTGCCTAAGGATCTTGCTTTTACTGTCTTTG
TCCCTTCAGAGAAGGCTTTCGAGCGCGAATTGAGTTTACAAGTAAATGAAAGCTTCACAACAGAGAAGACAGATGATACATATGCAGTACTTTCACGTGTATTGGGTTTC
TCTGCCGTTCCTCGAGCTATTTATTCGAGTTTGGTAGATTATGGGAAGGAAATTTCATATGATGCTGTATCTGGATTTACGTTGTACATTTCCAAGGACAGAGATGGGAT
GTTGATTGTTAACAGAGTGAGGTCAGAAATGGTGGATATAAAGAAGAAGGATATTGTTGTTCATATAATGGATGGTGTTATAATGGATGCTGAGTTTGAGCAGTCGGTAA
AACCTGATGACAGTGAAGAT

mRNA sequence

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Protein sequence

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MKKSFIVKNPIAFGFTILSVCCILIVLISTLRLPELTVGVNAVTRKVPKDDKLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLQVNESFTTEKTDDTYAVLSRVLGF
SAVPRAIYSSLVDYGKEISYDAVSGFTLYISKDRDGMLIVNRVRSEMVDIKKKDIVVHIMDGVIMDAEFEQSVKPDDSED

MS003408 (gene) of Bitter gourd (TR) v1 genome