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MS003416 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003416
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold234:2739162..2739530
RNA-Seq ExpressionMS003416
SyntenyMS003416
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP48720.1 hypothetical protein KK1_029609, partial [Cajanus cajan]3.0e-2555.56Show/hide
Query:  YPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTS
        YPAGND+ GD+  E ++ EP LPLEG +VS++ GE+ GG ++ LVE DG++A+ +VAED+GDAE++AEG DLEEL+A + GL  + L+P + DVAE+   
Subjt:  YPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTS

Query:  GHVAHGEEDRVLETIVA
         HVAHGEE+ VLE +VA
Subjt:  GHVAHGEEDRVLETIVA

KYP67713.1 hypothetical protein KK1_024064, partial [Cajanus cajan]7.3e-1143.1Show/hide
Query:  YPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTS
        YP GN +  +NR +  +SEP LPL G  VS+  GE+ GG ++ LV+ D  + K +V  D+G+AE+ AE  DL EL   + GL+R+D      DVAE    
Subjt:  YPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTS

Query:  GHVAHGEEDRVLETIV
         HV  GEED   E +V
Subjt:  GHVAHGEEDRVLETIV

KYP75902.1 hypothetical protein KK1_020110, partial [Cajanus cajan]5.6e-2761.54Show/hide
Query:  YPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTS
        YPAGND+P D+RNE +I EPSLPLE H+VSKN GE+  G +NSLVER+ ++AK NV + NGDAE++A+ RDLEEL   SN L+R  L P    V EQ T 
Subjt:  YPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTS

Query:  GHVAHGEEDRVLETIVA
        GHVAHGEE+ VLE +VA
Subjt:  GHVAHGEEDRVLETIVA

PON87575.1 hypothetical protein TorRG33x02_165680 [Trema orientale]3.7e-3165.85Show/hide
Query:  RKEESSYPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDV
        +K +SSYPA +++ G+NRNE DI EP LP +GH V K+ GE+  G  NSLVERD QI + NV+E +GD ED+AE RDL+ELD RSNGL RD LQP   DV
Subjt:  RKEESSYPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDV

Query:  AEQRTSGHVAHGEEDRVLETIVA
        AEQ TSGHVAHGEEDRVLE IVA
Subjt:  AEQRTSGHVAHGEEDRVLETIVA

RRT55438.1 hypothetical protein B296_00027044 [Ensete ventricosum]8.3e-2353.33Show/hide
Query:  ESSYPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQ
        + +YPAG+D+ GDNR+E DI  P LPL GH++ ++RGE+  G  + L+ER+ Q+ + +VA ++  AED+AE  DL+EL  RS+GL R   QP    VAEQ
Subjt:  ESSYPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQ

Query:  RTSGHVAHGEEDRVLETIVA
        R   HVAHGEEDRVLE+IVA
Subjt:  RTSGHVAHGEEDRVLETIVA

TrEMBL top hitse value%identityAlignment
A0A151S1P4 Uncharacterized protein (Fragment)1.5e-2555.56Show/hide
Query:  YPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTS
        YPAGND+ GD+  E ++ EP LPLEG +VS++ GE+ GG ++ LVE DG++A+ +VAED+GDAE++AEG DLEEL+A + GL  + L+P + DVAE+   
Subjt:  YPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTS

Query:  GHVAHGEEDRVLETIVA
         HVAHGEE+ VLE +VA
Subjt:  GHVAHGEEDRVLETIVA

A0A151U9F0 Uncharacterized protein (Fragment)2.7e-2761.54Show/hide
Query:  YPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTS
        YPAGND+P D+RNE +I EPSLPLE H+VSKN GE+  G +NSLVER+ ++AK NV + NGDAE++A+ RDLEEL   SN L+R  L P    V EQ T 
Subjt:  YPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTS

Query:  GHVAHGEEDRVLETIVA
        GHVAHGEE+ VLE +VA
Subjt:  GHVAHGEEDRVLETIVA

A0A2P5EQ19 Uncharacterized protein1.8e-3165.85Show/hide
Query:  RKEESSYPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDV
        +K +SSYPA +++ G+NRNE DI EP LP +GH V K+ GE+  G  NSLVERD QI + NV+E +GD ED+AE RDL+ELD RSNGL RD LQP   DV
Subjt:  RKEESSYPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDV

Query:  AEQRTSGHVAHGEEDRVLETIVA
        AEQ TSGHVAHGEEDRVLE IVA
Subjt:  AEQRTSGHVAHGEEDRVLETIVA

A0A426YUN5 Uncharacterized protein4.0e-2353.33Show/hide
Query:  ESSYPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQ
        + +YPAG+D+ GDNR+E DI  P LPL GH++ ++RGE+  G  + L+ER+ Q+ + +VA ++  AED+AE  DL+EL  RS+GL R   QP    VAEQ
Subjt:  ESSYPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQ

Query:  RTSGHVAHGEEDRVLETIVA
        R   HVAHGEEDRVLE+IVA
Subjt:  RTSGHVAHGEEDRVLETIVA

T1MFN7 Uncharacterized protein7.6e-2252.63Show/hide
Query:  GNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTSGHV
        G+D+ GD+ +ES++ +P LPL+GH V ++ GE+ GG ++SL+E DGQ+A+ +VA D+G AED+AE  DL ELDAR++ L   D +P +  V E+R  GHV
Subjt:  GNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTSGHV

Query:  AHGEEDRVLETIVA
        AHGEED VLE +VA
Subjt:  AHGEEDRVLETIVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAAAAGAAGAGAGTTCATACCCCGCTGGCAATGACAACCCCGGTGACAACAGGAATGAGAGTGACATAAGTGAGCCAAGCCTCCCTCTTGAAGGTCATCAGGTAAGCAA
AAACCGCGGTGAAAAATGGGGTGGTTGCTCCAACAGCCTGGTTGAAAGAGACGGGCAAATAGCGAAGGGAAATGTTGCCGAAGACAACGGAGATGCAGAAGATAAAGCTG
AGGGCAGAGATCTTGAAGAATTGGATGCGAGATCGAATGGTCTGAAGAGGGACGACCTTCAACCAAGCAATAGCGACGTAGCTGAGCAGAGAACAAGCGGTCATGTGGCA
CATGGTGAGGAAGATCGGGTACTTGAAACCATAGTTGCT
mRNA sequenceShow/hide mRNA sequence
AGAAAAGAAGAGAGTTCATACCCCGCTGGCAATGACAACCCCGGTGACAACAGGAATGAGAGTGACATAAGTGAGCCAAGCCTCCCTCTTGAAGGTCATCAGGTAAGCAA
AAACCGCGGTGAAAAATGGGGTGGTTGCTCCAACAGCCTGGTTGAAAGAGACGGGCAAATAGCGAAGGGAAATGTTGCCGAAGACAACGGAGATGCAGAAGATAAAGCTG
AGGGCAGAGATCTTGAAGAATTGGATGCGAGATCGAATGGTCTGAAGAGGGACGACCTTCAACCAAGCAATAGCGACGTAGCTGAGCAGAGAACAAGCGGTCATGTGGCA
CATGGTGAGGAAGATCGGGTACTTGAAACCATAGTTGCT
Protein sequenceShow/hide protein sequence
RKEESSYPAGNDNPGDNRNESDISEPSLPLEGHQVSKNRGEKWGGCSNSLVERDGQIAKGNVAEDNGDAEDKAEGRDLEELDARSNGLKRDDLQPSNSDVAEQRTSGHVA
HGEEDRVLETIVA