; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003420 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003420
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionimmediate early response 3-interacting protein 1-like
Genome locationscaffold234:2756428..2756658
RNA-Seq ExpressionMS003420
SyntenyMS003420
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0015031 - protein transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0030134 - COPII-coated ER to Golgi transport vesicle (cellular component)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR013880 - Yos1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI31551.3 unnamed protein product, partial [Vitis vinifera]6.1e-3292.21Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MGLWTLLEGCLL+ANALAILNEDRFLAPRGWSFS+FSGGRTKSFKGQLIGL YATQYLRVPLI+LNSICI +KLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG

XP_002280168.3 PREDICTED: immediate early response 3-interacting protein 1 [Vitis vinifera]6.1e-3292.21Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MGLWTLLEGCLL+ANALAILNEDRFLAPRGWSFS+FSGGRTKSFKGQLIGL YATQYLRVPLI+LNSICI +KLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG

XP_003552591.1 immediate early response 3-interacting protein 1 [Glycine max]2.3e-3193.51Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MGLWTLLEG LLLANALAILNEDRFLAPRGW F DFSGGRTKSFKGQLIGL YATQYLRVPLI+LNSICIFLKLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG

XP_022133684.1 immediate early response 3-interacting protein 1-like [Momordica charantia]1.3e-34100Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG

XP_022961355.1 immediate early response 3-interacting protein 1-like [Cucurbita moschata]3.6e-3293.51Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSF+GQLIGL YATQYLRVPL+MLN ICIF+KLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG

TrEMBL top hitse value%identityAlignment
A0A0R0EVK7 Uncharacterized protein1.1e-3193.51Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MGLWTLLEG LLLANALAILNEDRFLAPRGW F DFSGGRTKSFKGQLIGL YATQYLRVPLI+LNSICIFLKLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG

A0A6J1BWQ3 immediate early response 3-interacting protein 1-like6.4e-35100Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG

A0A6J1HBY6 immediate early response 3-interacting protein 1-like1.7e-3293.51Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSF+GQLIGL YATQYLRVPL+MLN ICIF+KLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG

A0A6J1JQY6 immediate early response 3-interacting protein 1-like1.7e-3293.51Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSF+GQLIGL YATQYLRVPL+MLN ICIF+KLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG

D7TMI4 Uncharacterized protein3.0e-3292.21Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MGLWTLLEGCLL+ANALAILNEDRFLAPRGWSFS+FSGGRTKSFKGQLIGL YATQYLRVPLI+LNSICI +KLVSG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG

SwissProt top hitse value%identityAlignment
P85007 Immediate early response 3-interacting protein 11.6e-0641.03Show/hide
Query:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFKGQLIGLTYATQ-YLRVPLIMLNSICIFLKLVSG
        L++L++  LL  NA+A+L+E+RFL   GW      G  G     K QL+ L  + +  +RVPLI++NSI I L L+ G
Subjt:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFKGQLIGLTYATQ-YLRVPLIMLNSICIFLKLVSG

Q1JQC2 Immediate early response 3-interacting protein 19.2e-0742.31Show/hide
Query:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFKGQLIGLTYATQ-YLRVPLIMLNSICIFLKLVSG
        L++LL+  LL  NA+A+L+E+RFL   GW      G  G     K QL+ L  + +  +RVPLI++NSI I L L+ G
Subjt:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFKGQLIGLTYATQ-YLRVPLIMLNSICIFLKLVSG

Q3B8G7 Immediate early response 3-interacting protein 13.2e-0742.31Show/hide
Query:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFKGQLIGLTYATQ-YLRVPLIMLNSICIFLKLVSG
        L+TLL+  LL  NA+A+L+E+RFL+  GW      G  G     K QL+ L  + +  +RVPLI++NS+ I L L+ G
Subjt:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFKGQLIGLTYATQ-YLRVPLIMLNSICIFLKLVSG

Q4VBI2 Immediate early response 3-interacting protein 15.4e-0739.74Show/hide
Query:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFKGQLIGLTYATQ-YLRVPLIMLNSICIFLKLVSG
        L+ L++  +L  NA+A+L+E+RFL+  GW      G  G     K QL+ L  + +  +RVPLI +NS+CI L L+ G
Subjt:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFKGQLIGLTYATQ-YLRVPLIMLNSICIFLKLVSG

Q9Y5U9 Immediate early response 3-interacting protein 19.2e-0742.31Show/hide
Query:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFKGQLIGLTYATQ-YLRVPLIMLNSICIFLKLVSG
        L++LL+  LL  NA+A+L+E+RFL   GW      G  G     K QL+ L  + +  +RVPLI++NSI I L L+ G
Subjt:  LWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSG--GRTKSFKGQLIGLTYATQ-YLRVPLIMLNSICIFLKLVSG

Arabidopsis top hitse value%identityAlignment
AT2G37975.1 Yos1-like protein4.4e-2058.97Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MG WTL+EG LL ANALAILNEDRFLAP+GW+ ++    G+  S KGQ+IGL +A  Y+R+PL++ N I I  KL SG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG

AT3G54085.1 Yos1-like protein3.4e-2060.26Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MG WTLL+G LL ANALAILNEDRFL PRGW+  +     R  S KGQ+IGL +A QY+R+PL+++N+  I LKL+SG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG

AT3G54085.2 Yos1-like protein3.4e-2060.26Show/hide
Query:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG
        MG WTLL+G LL ANALAILNEDRFL PRGW+  +     R  S KGQ+IGL +A QY+R+PL+++N+  I LKL+SG
Subjt:  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDF-SGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTGTGGACACTGCTAGAGGGCTGTCTGCTACTTGCCAATGCTCTAGCGATTCTAAACGAAGATCGTTTTCTCGCTCCTCGAGGGTGGAGCTTCTCAGACTTCTC
AGGAGGAAGAACAAAGTCATTCAAAGGGCAGCTTATAGGGCTCACCTATGCAACGCAATACTTGAGAGTTCCTCTCATAATGCTCAATTCCATCTGCATCTTTTTGAAAT
TGGTATCGGGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTGTGGACACTGCTAGAGGGCTGTCTGCTACTTGCCAATGCTCTAGCGATTCTAAACGAAGATCGTTTTCTCGCTCCTCGAGGGTGGAGCTTCTCAGACTTCTC
AGGAGGAAGAACAAAGTCATTCAAAGGGCAGCTTATAGGGCTCACCTATGCAACGCAATACTTGAGAGTTCCTCTCATAATGCTCAATTCCATCTGCATCTTTTTGAAAT
TGGTATCGGGA
Protein sequenceShow/hide protein sequence
MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSDFSGGRTKSFKGQLIGLTYATQYLRVPLIMLNSICIFLKLVSG