; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003432 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003432
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMaternal effect embryo arrest
Genome locationscaffold234:2821981..2822496
RNA-Seq ExpressionMS003432
SyntenyMS003432
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008289 - lipid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138443.1 uncharacterized protein LOC101208865 [Cucumis sativus]8.4e-8292.44Show/hide
Query:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+Q+PNCLA PS+A NLV+FHVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVN
Subjt:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN
        K+ALRIGML+SGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIAL+VYICLVSYAFIN
Subjt:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN

XP_008441411.1 PREDICTED: uncharacterized protein LOC103485537 [Cucumis melo]3.2e-8192.44Show/hide
Query:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+Q+P+CLA PS+A NLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEF +RVN
Subjt:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN
        K+ALRIGML+SGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIAL+VYICLVSYAFIN
Subjt:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN

XP_022134461.1 uncharacterized protein LOC111006700 [Momordica charantia]3.3e-8699.42Show/hide
Query:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
Subjt:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN
        KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALI+YICLVSYAFIN
Subjt:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN

XP_022990564.1 uncharacterized protein LOC111487406 [Cucurbita maxima]1.4e-8191.28Show/hide
Query:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GT+IH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLV++PNCLAAP++AENLVAFHVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVN
Subjt:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN
        K+A+RIGML+SGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL++YICLVSYAFIN
Subjt:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN

XP_038885575.1 uncharacterized protein LOC120075905 [Benincasa hispida]3.8e-8292.44Show/hide
Query:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNL+Q+PNCLA PS+A NLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
Subjt:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN
        K+A+R+GML+SGIGSVCGCGFLMMALINVVQIKLG LSCGSSQTFAAVVPLVILVP AL++YICLVSYAFIN
Subjt:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN

TrEMBL top hitse value%identityAlignment
A0A0A0KA88 Uncharacterized protein4.1e-8292.44Show/hide
Query:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+Q+PNCLA PS+A NLV+FHVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVN
Subjt:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN
        K+ALRIGML+SGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIAL+VYICLVSYAFIN
Subjt:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN

A0A1S3B446 uncharacterized protein LOC1034855371.6e-8192.44Show/hide
Query:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+Q+P+CLA PS+A NLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEF +RVN
Subjt:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN
        K+ALRIGML+SGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIAL+VYICLVSYAFIN
Subjt:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN

A0A5D3DL39 Uncharacterized protein1.6e-8192.44Show/hide
Query:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+Q+P+CLA PS+A NLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEF +RVN
Subjt:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN
        K+ALRIGML+SGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIAL+VYICLVSYAFIN
Subjt:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN

A0A6J1BXU9 uncharacterized protein LOC1110067001.6e-8699.42Show/hide
Query:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
Subjt:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN
        KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALI+YICLVSYAFIN
Subjt:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN

A0A6J1JSD7 uncharacterized protein LOC1114874067.0e-8291.28Show/hide
Query:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN
        MP GT+IH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLV++PNCLAAP++AENLVAFHVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVN
Subjt:  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVN

Query:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN
        K+A+RIGML+SGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL++YICLVSYAFIN
Subjt:  KSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01580.1 unknown protein6.8e-2943.71Show/hide
Query:  TSIHISALDGIVNVNSMFTLAVFLGLAWN-PNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSA
        TS+H++ALDGIV+ NS+FT+AVF+G++++ P+D T  L     C A   +  +LV F V SF+ FLFSSL+A G+K AI +  S       F   +N+  
Subjt:  TSIHISALDGIVNVNSMFTLAVFLGLAWN-PNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSA

Query:  LRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAF
        LR G++ +  GS+ GC FL++++++V+Q++LG LSCG++     V+ LV+LV  AL VYI  V Y+F
Subjt:  LRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAF

AT3G07510.1 unknown protein9.1e-3449.4Show/hide
Query:  AGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKS
        A TS+H+SALDG+VNVNS+FT+AVF+GL+       ++L Q  +C A+  +A+ L+ F V SFS FLFSSL+A GLK A+ +  S   +   F   +N  
Subjt:  AGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKS

Query:  ALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAF
         LR GM+ S +GSV GC FLM++++NV+QI+LG LSCGS     AV  LV LV  AL++YI    YAF
Subjt:  ALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAF

AT3G07510.2 unknown protein9.1e-3449.4Show/hide
Query:  AGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKS
        A TS+H+SALDG+VNVNS+FT+AVF+GL+       ++L Q  +C A+  +A+ L+ F V SFS FLFSSL+A GLK A+ +  S   +   F   +N  
Subjt:  AGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKS

Query:  ALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAF
         LR GM+ S +GSV GC FLM++++NV+QI+LG LSCGS     AV  LV LV  AL++YI    YAF
Subjt:  ALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAF

AT3G46890.1 BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1)8.3e-3551.89Show/hide
Query:  TSIHISALDGIVNVNSMFTLAVFLGLAWNPN---DPTNNLVQNPN---CLAA--PSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYH---PT
        T IH++A+DGIVNVNS+F+LA+FLGL  + N     +++  +N +   C++A  P++AE LV+ HVYSFS FLFSSLIA+ LKQAIR + +         
Subjt:  TSIHISALDGIVNVNSMFTLAVFLGLAWNPN---DPTNNLVQNPN---CLAA--PSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYH---PT

Query:  EFFV------RVNKSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSS-QTFAAVVPLVILVPIALIVYICLVSYAFI
        E  V      RVN +ALR+G++ S + SV GCGFL MAL+++VQIKLG L C  S    AA+VPLV+LVP ALI+Y+ LV YAFI
Subjt:  EFFV------RVNKSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSS-QTFAAVVPLVILVPIALIVYICLVSYAFI

AT5G05950.1 maternal effect embryo arrest 601.1e-5869.36Show/hide
Query:  TSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYH------PTEFFVR
        TSIHI+ALDGIVNVNS+FTLAVF+GLAWNP DP N+LV +PNC+    +AENLVAFHVYSF+SFLFSSLIALGLKQA+R++ +  +H      P  ++  
Subjt:  TSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYH------PTEFFVR

Query:  VNKSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSS-QTFAAVVPLVILVPIALIVYICLVSYAF
        VNK+ALR GM+ SG+GSVCGCGFLM+ALINVVQIKLGTL CG+S  T+AAVVPLVILVP AL +Y+ L+ YAF
Subjt:  VNKSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSS-QTFAAVVPLVILVPIALIVYICLVSYAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGCCGGCACCAGCATTCACATTTCAGCCCTTGACGGCATCGTGAACGTCAACTCCATGTTCACTCTCGCCGTCTTCTTGGGCCTGGCCTGGAACCCCAACGATCC
CACCAACAATCTCGTCCAAAACCCTAATTGCTTGGCCGCCCCCTCCATCGCCGAGAATCTCGTCGCCTTCCACGTCTACTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAA
TCGCCCTCGGCCTCAAGCAGGCCATACGGATCTCAAAAAGCCCCTTCTATCACCCGACCGAGTTCTTCGTCCGCGTCAACAAATCGGCCCTTCGGATCGGGATGCTGATT
TCGGGCATCGGATCGGTTTGCGGCTGCGGATTCCTCATGATGGCCCTAATTAACGTCGTCCAGATCAAGCTCGGCACTCTCAGCTGCGGCAGCTCTCAGACTTTCGCGGC
GGTGGTTCCGCTCGTGATTTTGGTTCCGATTGCCCTCATTGTTTACATCTGTCTTGTTTCCTACGCTTTTATCAAT
mRNA sequenceShow/hide mRNA sequence
ATGCCGGCCGGCACCAGCATTCACATTTCAGCCCTTGACGGCATCGTGAACGTCAACTCCATGTTCACTCTCGCCGTCTTCTTGGGCCTGGCCTGGAACCCCAACGATCC
CACCAACAATCTCGTCCAAAACCCTAATTGCTTGGCCGCCCCCTCCATCGCCGAGAATCTCGTCGCCTTCCACGTCTACTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAA
TCGCCCTCGGCCTCAAGCAGGCCATACGGATCTCAAAAAGCCCCTTCTATCACCCGACCGAGTTCTTCGTCCGCGTCAACAAATCGGCCCTTCGGATCGGGATGCTGATT
TCGGGCATCGGATCGGTTTGCGGCTGCGGATTCCTCATGATGGCCCTAATTAACGTCGTCCAGATCAAGCTCGGCACTCTCAGCTGCGGCAGCTCTCAGACTTTCGCGGC
GGTGGTTCCGCTCGTGATTTTGGTTCCGATTGCCCTCATTGTTTACATCTGTCTTGTTTCCTACGCTTTTATCAAT
Protein sequenceShow/hide protein sequence
MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLI
SGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN