; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003455 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003455
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin-protein ligase SDIR1
Genome locationscaffold234:2922285..2924304
RNA-Seq ExpressionMS003455
SyntenyMS003455
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0009414 - response to water deprivation (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0009789 - positive regulation of abscisic acid-activated signaling pathway (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45732.1 hypothetical protein Csa_005578 [Cucumis sativus]4.7e-14396Show/hide
Query:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
        MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
Subjt:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL

Query:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS
        LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSDS++NQQASSSES EKRQDSV+
Subjt:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS

Query:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV
        AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NCIDPWLRQQGTCPVCKFRAV+GWSE  QGETDAYMV
Subjt:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV

XP_004138475.1 E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus]4.7e-14396Show/hide
Query:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
        MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
Subjt:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL

Query:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS
        LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSDS++NQQASSSES EKRQDSV+
Subjt:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS

Query:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV
        AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NCIDPWLRQQGTCPVCKFRAV+GWSE  QGETDAYMV
Subjt:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV

XP_008441380.1 PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis melo]5.0e-14596.73Show/hide
Query:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
        MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
Subjt:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL

Query:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS
        LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSDS++NQQASSSESNEKRQDSV+
Subjt:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS

Query:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV
        AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NCIDPWLRQQGTCPVCKFRAV+GWSE GQGETDAYMV
Subjt:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV

XP_022133780.1 E3 ubiquitin-protein ligase SDIR1 [Momordica charantia]7.5e-14999.27Show/hide
Query:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
        MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
Subjt:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL

Query:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS
        LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS
Subjt:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS

Query:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV
        AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAV GWSEHG GETDAYMV
Subjt:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV

XP_038885371.1 E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida]3.6e-14395.64Show/hide
Query:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
        MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
Subjt:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL

Query:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS
        LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKV GPQSD ++NQQASSSESNEKRQD V+
Subjt:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS

Query:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV
        AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NCIDPWLRQQGTCPVCKFRAV+GWSE GQGETDAYMV
Subjt:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV

TrEMBL top hitse value%identityAlignment
A0A0A0KBF9 RING-type domain-containing protein2.3e-14396Show/hide
Query:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
        MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
Subjt:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL

Query:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS
        LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSDS++NQQASSSES EKRQDSV+
Subjt:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS

Query:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV
        AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NCIDPWLRQQGTCPVCKFRAV+GWSE  QGETDAYMV
Subjt:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV

A0A1S3B3A3 E3 ubiquitin-protein ligase SDIR12.4e-14596.73Show/hide
Query:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
        MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
Subjt:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL

Query:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS
        LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSDS++NQQASSSESNEKRQDSV+
Subjt:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS

Query:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV
        AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NCIDPWLRQQGTCPVCKFRAV+GWSE GQGETDAYMV
Subjt:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV

A0A6J1BW51 E3 ubiquitin-protein ligase SDIR13.6e-14999.27Show/hide
Query:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
        MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
Subjt:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL

Query:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS
        LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS
Subjt:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS

Query:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV
        AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAV GWSEHG GETDAYMV
Subjt:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV

A0A6J1GTU0 E3 ubiquitin-protein ligase SDIR1-like isoform X26.6e-14395.64Show/hide
Query:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
        MSFVFRGTRVPDIENGL GFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
Subjt:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL

Query:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS
        LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSD A NQQASSSESNEKR DSV+
Subjt:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS

Query:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV
        AV GTK+L+DELTCSVCLEQVNVGELIRSLPCLHQFH NCIDPWL QQGTCPVCKFRAV GWSE GQGETDAYMV
Subjt:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV

E5GC70 Protein binding protein2.4e-14596.73Show/hide
Query:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
        MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL
Subjt:  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGL

Query:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS
        LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSDS++NQQASSSESNEKRQDSV+
Subjt:  LGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVS

Query:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV
        AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NCIDPWLRQQGTCPVCKFRAV+GWSE GQGETDAYMV
Subjt:  AVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV

SwissProt top hitse value%identityAlignment
P0DPR2 E3 ubiquitin-protein ligase RNF432.9e-1051.16Show/hide
Query:  CSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKF
        C++CLE+   G+ +R LPC H++H  C+DPWLRQ  TCP+C +
Subjt:  CSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKF

Q10R93 Receptor homology region, transmembrane domain- and RING domain-containing protein 12.9e-1048.57Show/hide
Query:  TKTLEDELT---CSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGT-CPVCKFRAVAGWSEHGQGET
        TK  ED  T   C++CLE  NVGE +R LPC H+FH  C+D WL    T CPVCK  A  G  +    ET
Subjt:  TKTLEDELT---CSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGT-CPVCKFRAVAGWSEHGQGET

Q68DV7 E3 ubiquitin-protein ligase RNF431.7e-1038.96Show/hide
Query:  QASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAG
        QAS  ++  +  DS S+            C++CLE+ + G+ +R + CLH+FH NC+DPWL Q  TCP+C F    G
Subjt:  QASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAG

Q8NC42 E3 ubiquitin-protein ligase RNF1491.7e-1048.33Show/hide
Query:  DELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCK---FRAVAGWSEHG
        D   C+VC+E   V ++IR LPC H FH  CIDPWL    TCP+CK    +A+  W E G
Subjt:  DELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCK---FRAVAGWSEHG

Q9M2S6 E3 ubiquitin-protein ligase SDIR13.4e-11278.75Show/hide
Query:  MSFVFRGTRVPDIENGLS-GFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASG
        MSFVFRG+R  D+E+G S GF+PERRAMRVH ARPVNSNSLAFLVTVLLLFMILNSHQM PNFLLWLVLGVFLMATTLRMYATCQQLQA AQA+A AASG
Subjt:  MSFVFRGTRVPDIENGLS-GFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASG

Query:  LLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSV
        L  HTELRLH+PPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNV TT SMSEE+INALPVHKYKV  P++  ++ +QAS+S S EK  DS 
Subjt:  LLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSV

Query:  SAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDA
        +     K  EDELTCSVCLEQV VGE++R+LPCLHQFH  CIDPWLRQQGTCPVCKFRA +GW E  + + DA
Subjt:  SAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDA

Arabidopsis top hitse value%identityAlignment
AT1G04790.1 RING/U-box superfamily protein3.7e-1334.68Show/hide
Query:  LDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLP
        +DR+F + DYE L ALD +N                 H++   G  S + +N    S+   +  Q+               TC +CLE   +G+ IR LP
Subjt:  LDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLP

Query:  CLHQFHTNCIDPWLRQQGTCPVCK
        CLH+FH +CIDPWL +  +CPVCK
Subjt:  CLHQFHTNCIDPWLRQQGTCPVCK

AT1G49850.1 RING/U-box superfamily protein2.7e-1153.19Show/hide
Query:  CSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVA
        CS+CLE    G+++ SLPC H FH++C++PWLR  G CP C+ RA+A
Subjt:  CSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVA

AT3G55530.1 RING/U-box superfamily protein2.4e-11378.75Show/hide
Query:  MSFVFRGTRVPDIENGLS-GFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASG
        MSFVFRG+R  D+E+G S GF+PERRAMRVH ARPVNSNSLAFLVTVLLLFMILNSHQM PNFLLWLVLGVFLMATTLRMYATCQQLQA AQA+A AASG
Subjt:  MSFVFRGTRVPDIENGLS-GFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASG

Query:  LLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSV
        L  HTELRLH+PPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNV TT SMSEE+INALPVHKYKV  P++  ++ +QAS+S S EK  DS 
Subjt:  LLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSV

Query:  SAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDA
        +     K  EDELTCSVCLEQV VGE++R+LPCLHQFH  CIDPWLRQQGTCPVCKFRA +GW E  + + DA
Subjt:  SAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDA

AT4G32600.1 RING/U-box superfamily protein3.5e-1135.4Show/hide
Query:  EQINALPVHKYKVSGPQSDSAMNQQASSSESN--EKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRA
        E INALP HK+K+   +S+   N  +S+SE        D+  A+ G     ++  C +CL +    E +R LPC H FH  C+D WL+   +CP+CK   
Subjt:  EQINALPVHKYKVSGPQSDSAMNQQASSSESN--EKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRA

Query:  VAGWSEHGQGETD
            SE G+  +D
Subjt:  VAGWSEHGQGETD

AT5G08139.1 RING/U-box superfamily protein2.7e-1140.68Show/hide
Query:  LTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGET
        L C+VC +++N+G     LPC H++H+ CI PWL+ + TCPVC++      +E+ Q +T
Subjt:  LTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTTGTTTTCCGTGGAACAAGAGTGCCAGATATAGAAAATGGTCTATCTGGATTTATACCCGAGCGACGTGCAATGCGGGTCCATGCAGCACGGCCTGTTAACTC
AAACTCACTTGCCTTTCTTGTCACAGTTCTGTTGTTATTCATGATATTAAACTCTCACCAGATGTCGCCAAACTTTCTACTCTGGCTTGTGCTTGGTGTCTTCTTGATGG
CTACAACATTAAGGATGTACGCAACGTGTCAACAACTTCAGGCTCAAGCCCAAGCTCGAGCTATGGCAGCCAGTGGCCTTCTTGGTCACACTGAATTGAGGCTACATATG
CCACCATCAATAGCACTTGCAACCAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTTGATCGTGAATTTGATGATTTAGACTATGAGACTTTGAGAGCATT
GGATTCTGATAATGTTCCAACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCTGTTCATAAATACAAGGTTTCTGGTCCTCAAAGTGACTCCGCTATGAATC
AACAAGCTTCATCTTCTGAATCTAATGAGAAGAGGCAAGATTCTGTTAGTGCAGTTGGCGGTACTAAGACCTTAGAGGATGAACTGACTTGCAGTGTTTGCTTGGAGCAA
GTAAATGTTGGTGAGCTCATACGTAGTTTGCCATGCTTGCATCAGTTCCATACAAACTGCATCGATCCATGGCTGCGACAGCAGGGAACATGCCCTGTTTGTAAATTCAG
AGCGGTGGCCGGGTGGTCAGAACACGGGCAAGGGGAAACCGATGCTTATATGGTT
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTTGTTTTCCGTGGAACAAGAGTGCCAGATATAGAAAATGGTCTATCTGGATTTATACCCGAGCGACGTGCAATGCGGGTCCATGCAGCACGGCCTGTTAACTC
AAACTCACTTGCCTTTCTTGTCACAGTTCTGTTGTTATTCATGATATTAAACTCTCACCAGATGTCGCCAAACTTTCTACTCTGGCTTGTGCTTGGTGTCTTCTTGATGG
CTACAACATTAAGGATGTACGCAACGTGTCAACAACTTCAGGCTCAAGCCCAAGCTCGAGCTATGGCAGCCAGTGGCCTTCTTGGTCACACTGAATTGAGGCTACATATG
CCACCATCAATAGCACTTGCAACCAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTTGATCGTGAATTTGATGATTTAGACTATGAGACTTTGAGAGCATT
GGATTCTGATAATGTTCCAACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCTGTTCATAAATACAAGGTTTCTGGTCCTCAAAGTGACTCCGCTATGAATC
AACAAGCTTCATCTTCTGAATCTAATGAGAAGAGGCAAGATTCTGTTAGTGCAGTTGGCGGTACTAAGACCTTAGAGGATGAACTGACTTGCAGTGTTTGCTTGGAGCAA
GTAAATGTTGGTGAGCTCATACGTAGTTTGCCATGCTTGCATCAGTTCCATACAAACTGCATCGATCCATGGCTGCGACAGCAGGGAACATGCCCTGTTTGTAAATTCAG
AGCGGTGGCCGGGTGGTCAGAACACGGGCAAGGGGAAACCGATGCTTATATGGTT
Protein sequenceShow/hide protein sequence
MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHM
PPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQ
VNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVAGWSEHGQGETDAYMV