; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS003472 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS003472
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosome-recycling factor, chloroplastic
Genome locationscaffold234:3017872..3019898
RNA-Seq ExpressionMS003472
SyntenyMS003472
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR002661 - Ribosome recycling factor
IPR023584 - Ribosome recycling factor domain
IPR036191 - RRF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602677.1 hypothetical protein SDJN03_07910, partial [Cucurbita argyrosperma subsp. sororia]4.9e-12189.73Show/hide
Query:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRS SYRNFLL RN A PSR FSFFVND    WTSE PG FALP ADFIRESRRGFAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHI A+CKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC

Query:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG
        CEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDELTKK IKSAEDLCKAKEKEI GG
Subjt:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG

KAG7033363.1 frr [Cucurbita argyrosperma subsp. argyrosperma]5.7e-12290.11Show/hide
Query:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRS SYRNFLL RN A PSR FSFFVND    WTSE PG FALPPADFIRESRRGFAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHI A+CKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC

Query:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG
        CEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDELTKK IKSAEDLCKAKEKEI GG
Subjt:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG

XP_022133492.1 uncharacterized protein LOC111006057 [Momordica charantia]1.6e-13599.62Show/hide
Query:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
Subjt:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC
        SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC

Query:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG
        CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKK IKSAEDLCKAKEKEIAGG
Subjt:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG

XP_022990977.1 uncharacterized protein LOC111487708 [Cucurbita maxima]1.7e-12190.11Show/hide
Query:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRS  YR+FLL RN A PSR FSFFVND    WTSE PGVFALPPADFIRESRRGFAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAIAAL
Subjt:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHI A+CKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC

Query:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG
        CEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDELTKK IKSAEDLCKAKEKEI GG
Subjt:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG

XP_023544000.1 uncharacterized protein LOC111803704 [Cucurbita pepo subsp. pepo]1.7e-12189.73Show/hide
Query:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRS SYRNFLL RN A PSR  SFFVND   +WTSE PG FALPPADFIRESRRGFAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHI A+CKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC

Query:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG
        CEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDELTKK IKSAEDLCKAKEKEI GG
Subjt:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG

TrEMBL top hitse value%identityAlignment
A0A1S3B2S9 Ribosome-recycling factor, chloroplastic8.9e-11383.27Show/hide
Query:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRS SYRNF++ RN A  +  FSF +N  S +WTS+T   FALPP+DFIRESRRGFAK RKSN+SSTS+AEAL DIRPTIK+NASSQMEA+I AL
Subjt:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC
        SGELSKLRTGRASSGMLDHIIVETSG+K+PLNQIA VSVLDSKTLSINPYDP+TLKNLESAI+SSPLG+APRVDGERLIAVIPPLTKEHI A+CKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC

Query:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG
        CEDSRQSIRRARQKAMDT+KK+++SYPKDD+KRLEKEVDELTKK IKSAE+LCKAKEKEI GG
Subjt:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG

A0A5D3DLY3 Ribosome-recycling factor, chloroplastic8.9e-11383.27Show/hide
Query:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRS SYRNF++ RN A  +  FSF +N  S +WTS+T   FALPP+DFIRESRRGFAK RKSN+SSTS+AEAL DIRPTIK+NASSQMEA+I AL
Subjt:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC
        SGELSKLRTGRASSGMLDHIIVETSG+K+PLNQIA VSVLDSKTLSINPYDP+TLKNLESAI+SSPLG+APRVDGERLIAVIPPLTKEHI A+CKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC

Query:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG
        CEDSRQSIRRARQKAMDT+KK+++SYPKDD+KRLEKEVDELTKK IKSAE+LCKAKEKEI GG
Subjt:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG

A0A6J1BWU9 Ribosome-recycling factor, chloroplastic7.5e-13699.62Show/hide
Query:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
Subjt:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC
        SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC

Query:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG
        CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKK IKSAEDLCKAKEKEIAGG
Subjt:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG

A0A6J1GLU1 Ribosome-recycling factor, chloroplastic2.3e-12189.73Show/hide
Query:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRS SYRNFLL RN A PSR FSFFV D    WTSE PG FALPPADFIRESRRGFAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+AL
Subjt:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHI A+CKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC

Query:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG
        CEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDELTKK IKSAEDLCKAKEKEI GG
Subjt:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG

A0A6J1JKE4 Ribosome-recycling factor, chloroplastic8.1e-12290.11Show/hide
Query:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL
        MAMFLKRS  YR+FLL RN A PSR FSFFVND    WTSE PGVFALPPADFIRESRRGFAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAIAAL
Subjt:  MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAAL

Query:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC
        SGELSKLRTGRASSGMLDHIIVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHI A+CKLVTKC
Subjt:  SGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKC

Query:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG
        CEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDELTKK IKSAEDLCKAKEKEI GG
Subjt:  CEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG

SwissProt top hitse value%identityAlignment
A4IMC6 Ribosome-recycling factor8.0e-2637.93Show/hide
Query:  ASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKE
        A  +M+ A+ A S EL+ +R GRA++G+L+ + V+  G+  P+NQ+A +SV +++ L I PYD + +K +E AI++S LG+ P  DG  +  VIPPLT+E
Subjt:  ASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKE

Query:  HILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI
            + KLV K  E+++ ++R  R+ A D +KK+  N+   +D+++    EV +LT   I   + + K KEKE+
Subjt:  HILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI

B8DSA1 Ribosome-recycling factor6.1e-2638.55Show/hide
Query:  TIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIP
        +I  +A  +ME A+ +L  E +KLRTGRAS+ ++D+I V+  G   P++Q+A VSV DS+TL+I P+D +  + +E AI+ S LGL P  DG+ +   IP
Subjt:  TIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIP

Query:  PLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI
        PLT+E    + K+  K  E+++ ++R  R+ A D +KK+       +DD+++   +V +LT + +  +++ C AKEKEI
Subjt:  PLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI

Q5L0J9 Ribosome-recycling factor4.7e-2638.51Show/hide
Query:  ASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKE
        A  +M+ A+ A + EL+ +R GRA++G+L+ + V+  G+  P+NQ+A +SV +++ L I PYD + +K +E AI++S LGL P  DG  +  VIPPLT+E
Subjt:  ASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKE

Query:  HILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI
            + KLV K  ED++ ++R  R+ A D +KK+  N    +D+++    EV +LT   I   + + K KEKE+
Subjt:  HILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI

Q5WFT1 Ribosome-recycling factor2.7e-2638.76Show/hide
Query:  IKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPP
        IKA+A ++M+ AI  LS EL+KLR GRA+  +LD + VE  G + PLNQ+A V+V +++ L I PYD   + ++E AI+ S LGL P  DG+ +   IPP
Subjt:  IKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPP

Query:  LTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI
        LT+E    + +LV+K  E+S+ ++R  R+ A D +KK+  +    +D+++    ++ +LT   +   ++  K KE+EI
Subjt:  LTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI

Q9KA66 Ribosome-recycling factor1.2e-2641.14Show/hide
Query:  NASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTK
        +A  +M  A  AL  EL+KLR GRA+  MLD I VE  G + PLNQ+A +SV +++ L I P+D +++ ++E AI  S LGL P  DG  +   IPPLT+
Subjt:  NASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTK

Query:  EHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKK--MNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI
        E    + KLV K  E+++ ++R  R+ A D +KK   +    +DD++R+ ++V +LT K I+  +   +AKEKEI
Subjt:  EHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKK--MNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI

Arabidopsis top hitse value%identityAlignment
AT3G01800.1 Ribosome recycling factor5.1e-8464.77Show/hide
Query:  MAMFLKRSLSYRN---FLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKS-NDSSTSMAEALPDIRPTIKANASSQMEAA
        MAMF++R+LS RN   FL   +  V SR FS F++ P++         F L   DF+R+SRRGFAK +KS +DS T M +A PDI PT+KA ASSQMEAA
Subjt:  MAMFLKRSLSYRN---FLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKS-NDSSTSMAEALPDIRPTIKANASSQMEAA

Query:  IAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKL
        I ALS +L+KLRTGRA+ GMLDHI+VET G+KMPLN +A+VSVLD KTLS+NPYDP+T+K LE AIV+SPLGL P++DG+RL+A IP LTKEHI A+CK+
Subjt:  IAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKL

Query:  VTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI
        VTK  E  +QSIRRARQKA+DTIKK  +S PKD++KRLEKEVDELTKK +KSAED+CK+KEKEI
Subjt:  VTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI

AT3G63190.1 ribosome recycling factor, chloroplast precursor9.4e-2234.25Show/hide
Query:  RPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAV
        +  I+ +  S+ME  I  L    + +RTGR+++ MLD I VE  G  + L  IA +S  D  +L + PYD ++LK +E AIV+S LG+ P  DG+ +   
Subjt:  RPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAV

Query:  IPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI
        +PPLT +    + K+V K  E+ + ++R  R+ A+ +  K+       +D++K L  ++ +L    +K  E+L K KEKE+
Subjt:  IPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGTTTCTGAAACGTTCACTCTCCTACAGAAATTTCCTTCTTTTTCGAAATTCTGCAGTTCCTAGTCGCAAGTTTTCCTTCTTCGTCAACGATCCCAGCATCGC
ATGGACCTCCGAAACGCCTGGGGTTTTTGCTCTTCCTCCTGCAGATTTCATCCGAGAAAGTCGCAGGGGCTTTGCTAAAGCCCGAAAATCAAATGATTCTTCTACAAGCA
TGGCTGAGGCACTGCCTGATATTAGACCCACTATTAAAGCCAACGCTAGCTCACAGATGGAAGCTGCAATAGCTGCATTATCAGGAGAACTAAGCAAACTTCGAACAGGA
AGAGCATCATCAGGAATGCTTGACCACATTATAGTAGAAACTTCAGGCTTGAAGATGCCGTTGAATCAGATTGCTGTTGTATCGGTCTTAGATTCAAAAACACTGTCGAT
AAATCCGTATGATCCTAATACACTGAAGAATTTAGAGAGTGCTATAGTTTCATCTCCTTTAGGCTTAGCACCAAGAGTAGATGGAGAGAGGTTAATTGCAGTCATTCCAC
CATTGACCAAAGAGCATATCCTGGCTGTATGTAAGCTGGTCACTAAGTGTTGTGAAGATTCCAGGCAAAGCATACGAAGAGCTCGTCAAAAGGCAATGGATACAATTAAA
AAAATGAACGCTAGCTACCCAAAGGATGATATTAAAAGACTGGAAAAAGAAGTAGATGAATTGACTAAGAAGCTTATCAAGTCAGCCGAAGACCTCTGCAAGGCAAAGGA
GAAGGAGATCGCTGGAGGT
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGTTTCTGAAACGTTCACTCTCCTACAGAAATTTCCTTCTTTTTCGAAATTCTGCAGTTCCTAGTCGCAAGTTTTCCTTCTTCGTCAACGATCCCAGCATCGC
ATGGACCTCCGAAACGCCTGGGGTTTTTGCTCTTCCTCCTGCAGATTTCATCCGAGAAAGTCGCAGGGGCTTTGCTAAAGCCCGAAAATCAAATGATTCTTCTACAAGCA
TGGCTGAGGCACTGCCTGATATTAGACCCACTATTAAAGCCAACGCTAGCTCACAGATGGAAGCTGCAATAGCTGCATTATCAGGAGAACTAAGCAAACTTCGAACAGGA
AGAGCATCATCAGGAATGCTTGACCACATTATAGTAGAAACTTCAGGCTTGAAGATGCCGTTGAATCAGATTGCTGTTGTATCGGTCTTAGATTCAAAAACACTGTCGAT
AAATCCGTATGATCCTAATACACTGAAGAATTTAGAGAGTGCTATAGTTTCATCTCCTTTAGGCTTAGCACCAAGAGTAGATGGAGAGAGGTTAATTGCAGTCATTCCAC
CATTGACCAAAGAGCATATCCTGGCTGTATGTAAGCTGGTCACTAAGTGTTGTGAAGATTCCAGGCAAAGCATACGAAGAGCTCGTCAAAAGGCAATGGATACAATTAAA
AAAATGAACGCTAGCTACCCAAAGGATGATATTAAAAGACTGGAAAAAGAAGTAGATGAATTGACTAAGAAGCTTATCAAGTCAGCCGAAGACCTCTGCAAGGCAAAGGA
GAAGGAGATCGCTGGAGGT
Protein sequenceShow/hide protein sequence
MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTG
RASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIK
KMNASYPKDDIKRLEKEVDELTKKLIKSAEDLCKAKEKEIAGG